RNA–Protein interactions for RNA: ENST00000478658.1

USF3-202, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene USF3, Length 8,461 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-202ENST00000478658 HOXA9P31269 272 aa5.5□□□□□ -1.53
USF3-202ENST00000478658 SDC2P34741 201 aa5.5□□□□□ -1.53
USF3-202ENST00000478658 ACADVLP49748 655 aa5.5□□□□□ -1.53
USF3-202ENST00000478658 AKR1D1P51857 326 aa5.5□□□□□ -1.53
USF3-202ENST00000478658 FAAH2Q6GMR7 532 aa5.5□□□□□ -1.53
USF3-202ENST00000478658 SAMD14Q8IZD0 417 aaPredicted RBP5.5□□□□□ -1.53
USF3-202ENST00000478658 SEC14L1Q92503 715 aa5.5□□□□□ -1.53
USF3-202ENST00000478658 AGAP3Q96P47 875 aa5.5□□□□□ -1.53
USF3-202ENST00000478658 GPR101Q96P66 508 aaPredicted RBP5.5□□□□□ -1.53
USF3-202ENST00000478658 APOL2Q9BQE5 337 aa5.5□□□□□ -1.53
USF3-202ENST00000478658 HTATIP2Q9BUP3 242 aa5.5□□□□□ -1.53
USF3-202ENST00000478658 SDHAF3Q9NRP4 125 aa5.5□□□□□ -1.53
USF3-202ENST00000478658 SEMA3GQ9NS98 782 aa5.5□□□□□ -1.53
USF3-202ENST00000478658 ZNF358Q9NW07 568 aa5.5□□□□□ -1.53
USF3-202ENST00000478658 TCOF1Q13428 1488 aaKnown RBP5.5□□□□□ -1.53
USF3-202ENST00000478658 MYMKA6NI61 221 aa5.49□□□□□ -1.53
USF3-202ENST00000478658 AIM2O14862 343 aa5.49□□□□□ -1.53
USF3-202ENST00000478658 GSC2O15499 205 aa5.49□□□□□ -1.53
USF3-202ENST00000478658 SSX4O60224 188 aa5.49□□□□□ -1.53
USF3-202ENST00000478658 YES1P07947 543 aa5.49□□□□□ -1.53
USF3-202ENST00000478658 THRAP10827 490 aa5.49□□□□□ -1.53
USF3-202ENST00000478658 CKBP12277 381 aa5.49□□□□□ -1.53
USF3-202ENST00000478658 NUDT6P53370 316 aa5.49□□□□□ -1.53
USF3-202ENST00000478658 HMGCS1Q01581 520 aa5.49□□□□□ -1.53
USF3-202ENST00000478658 SLC10A7Q0GE19 358 aa5.49□□□□□ -1.53
USF3-202ENST00000478658 SCRN1Q12765 414 aa5.49□□□□□ -1.53
USF3-202ENST00000478658 MPP3Q13368 585 aa5.49□□□□□ -1.53
USF3-202ENST00000478658 SCARA5Q6ZMJ2 495 aa5.49□□□□□ -1.53
USF3-202ENST00000478658 NUP54Q7Z3B4 507 aa5.49□□□□□ -1.53
USF3-202ENST00000478658 THNSL1Q8IYQ7 743 aa5.49□□□□□ -1.53
USF3-202ENST00000478658 TCAIMQ8N3R3 496 aa5.49□□□□□ -1.53
USF3-202ENST00000478658 MSL3Q8N5Y2 521 aaKnown RBP5.49□□□□□ -1.53
USF3-202ENST00000478658 ZNF614Q8N883 585 aa5.49□□□□□ -1.53
USF3-202ENST00000478658 OR56B2PQ8NGI1 322 aa5.49□□□□□ -1.53
USF3-202ENST00000478658 RHPN1Q8TCX5 695 aa5.49□□□□□ -1.53
USF3-202ENST00000478658 BRSK1Q8TDC3 778 aa5.49□□□□□ -1.53
USF3-202ENST00000478658 PPP1R13LQ8WUF5 828 aa5.49□□□□□ -1.53
USF3-202ENST00000478658 TGFBRAP1Q8WUH2 860 aa5.49□□□□□ -1.53
USF3-202ENST00000478658 SMARCD1Q96GM5 515 aa5.49□□□□□ -1.53
USF3-202ENST00000478658 RMDN3Q96TC7 470 aa5.49□□□□□ -1.53
USF3-202ENST00000478658 HDHD5Q9BXW7 423 aa5.49□□□□□ -1.53
USF3-202ENST00000478658 ILKAPQ9H0C8 392 aaPredicted RBP5.49□□□□□ -1.53
USF3-202ENST00000478658 ATG5Q9H1Y0 275 aa5.49□□□□□ -1.53
USF3-202ENST00000478658 RC3H2Q9HBD1 1191 aaKnown RBP5.49□□□□□ -1.53
USF3-202ENST00000478658 MRM3Q9HC36 420 aaKnown RBP5.49□□□□□ -1.53
USF3-202ENST00000478658 KLC4Q9NSK0 619 aa5.49□□□□□ -1.53
USF3-202ENST00000478658 EXD2Q9NVH0 621 aa5.49□□□□□ -1.53
USF3-202ENST00000478658 ADAM22Q9P0K1 906 aa5.49□□□□□ -1.53
USF3-202ENST00000478658 UBQLN1Q9UMX0 589 aaKnown RBP5.49□□□□□ -1.53
USF3-202ENST00000478658 RPL36Q9Y3U8 105 aaKnown RBP5.49□□□□□ -1.53
USF3-202ENST00000478658 GMNCA6NCL1 334 aa5.49□□□□□ -1.53
USF3-202ENST00000478658 FBXO21O94952 628 aa5.49□□□□□ -1.53
USF3-202ENST00000478658 OR56A5P0C7T3 313 aa5.49□□□□□ -1.53
USF3-202ENST00000478658 EPHA4P54764 986 aa5.49□□□□□ -1.53
USF3-202ENST00000478658 GPX6P59796 221 aa5.49□□□□□ -1.53
USF3-202ENST00000478658 POLR2FP61218 127 aaKnown RBP5.49□□□□□ -1.53
USF3-202ENST00000478658 ADAM8P78325 824 aa5.49□□□□□ -1.53
USF3-202ENST00000478658 ENPEPQ07075 957 aa5.49□□□□□ -1.53
USF3-202ENST00000478658 TTC27Q6P3X3 843 aa5.49□□□□□ -1.53
USF3-202ENST00000478658 SLC2A7Q6PXP3 512 aa5.49□□□□□ -1.53
USF3-202ENST00000478658 KYAT3Q6YP21 454 aaKnown RBP5.49□□□□□ -1.53
USF3-202ENST00000478658 DENND5BQ6ZUT9 1274 aa5.49□□□□□ -1.53
USF3-202ENST00000478658 ZNF321PQ8N8H1 164 aa5.49□□□□□ -1.53
USF3-202ENST00000478658 RNF170Q96K19 258 aa5.49□□□□□ -1.53
USF3-202ENST00000478658 PHF12Q96QT6 1004 aa5.49□□□□□ -1.53
USF3-202ENST00000478658 BHLHE41Q9C0J9 482 aaPredicted RBP5.49□□□□□ -1.53
USF3-202ENST00000478658 NGRNQ9NPE2 291 aaKnown RBP5.49□□□□□ -1.53
USF3-202ENST00000478658 HEY2Q9UBP5 337 aa5.49□□□□□ -1.53
USF3-202ENST00000478658 PRMT5O14744 637 aaPredicted RBP5.49□□□□□ -1.53
USF3-202ENST00000478658 NKRFO15226 690 aaKnown RBP eCLIP5.49□□□□□ -1.53
USF3-202ENST00000478658 OR10H2O60403 315 aa5.49□□□□□ -1.53
USF3-202ENST00000478658 CSF1RP07333 972 aa5.49□□□□□ -1.53
USF3-202ENST00000478658 THEGLP0DJG4 465 aa5.49□□□□□ -1.53
USF3-202ENST00000478658 MAOAP21397 527 aa5.49□□□□□ -1.53
USF3-202ENST00000478658 MAPK3P27361 379 aaPredicted RBP5.49□□□□□ -1.53
USF3-202ENST00000478658 PTPN6P29350 595 aa5.49□□□□□ -1.53
USF3-202ENST00000478658 EEF1A1P68104 462 aaKnown RBP5.49□□□□□ -1.53
USF3-202ENST00000478658 CRHR2Q13324 411 aa5.49□□□□□ -1.53
USF3-202ENST00000478658 EEF1A1P5Q5VTE0 462 aa5.49□□□□□ -1.53
USF3-202ENST00000478658 FAM46CQ5VWP2 391 aa5.49□□□□□ -1.53
USF3-202ENST00000478658 USP17L2Q6R6M4 530 aa5.49□□□□□ -1.53
USF3-202ENST00000478658 USP30Q70CQ3 517 aa5.49□□□□□ -1.53
USF3-202ENST00000478658 JAZF1Q86VZ6 243 aa5.49□□□□□ -1.53
USF3-202ENST00000478658 LIX1Q8N485 282 aa5.49□□□□□ -1.53
USF3-202ENST00000478658 DNAAF1Q8NEP3 725 aa5.49□□□□□ -1.53
USF3-202ENST00000478658 KCNE4Q8WWG9 221 aa5.49□□□□□ -1.53
USF3-202ENST00000478658 TMX3Q96JJ7 454 aa5.49□□□□□ -1.53
USF3-202ENST00000478658 ELOVL6Q9H5J4 265 aa5.49□□□□□ -1.53
USF3-202ENST00000478658 ELAC1Q9H777 363 aaKnown RBP5.49□□□□□ -1.53
USF3-202ENST00000478658 SLC24A3Q9HC58 644 aa5.49□□□□□ -1.53
USF3-202ENST00000478658 FAM153AQ9UHL3 310 aa5.49□□□□□ -1.53
USF3-202ENST00000478658 TRHDEQ9UKU6 1024 aa5.49□□□□□ -1.53
USF3-202ENST00000478658 AP4E1Q9UPM8 1137 aa5.49□□□□□ -1.53
USF3-202ENST00000478658 PCDHGA6Q9Y5G7 932 aa5.49□□□□□ -1.53
USF3-202ENST00000478658 ABCB11O95342 1321 aa5.49□□□□□ -1.53
USF3-202ENST00000478658 LMTK3Q96Q04 1460 aa5.49□□□□□ -1.53
USF3-202ENST00000478658 MTHFRP42898 656 aa5.49□□□□□ -1.53
USF3-202ENST00000478658 DNASE1L1P49184 302 aa5.49□□□□□ -1.53
USF3-202ENST00000478658 CLCN6P51797 869 aa5.49□□□□□ -1.53
USF3-202ENST00000478658 AGFG1P52594 562 aaKnown RBP5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms