RNA–Protein interactions for RNA: ENST00000478288.5

ABCF3-212, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 3

Gene ABCF3, Length 754 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-212ENST00000478288 ARTNQ5T4W7 220 aa13.28□□□□□ -0.28
ABCF3-212ENST00000478288 ERN2Q76MJ5 926 aaKnown RBP13.28□□□□□ -0.28
ABCF3-212ENST00000478288 ABI3BPQ7Z7G0 1075 aa13.28□□□□□ -0.28
ABCF3-212ENST00000478288 DCP2Q8IU60 420 aaKnown RBP13.28□□□□□ -0.28
ABCF3-212ENST00000478288 CREBRFQ8IUR6 639 aa13.28□□□□□ -0.28
ABCF3-212ENST00000478288 SLC25A45Q8N413 288 aa13.28□□□□□ -0.28
ABCF3-212ENST00000478288 BAP1Q92560 729 aa13.28□□□□□ -0.28
ABCF3-212ENST00000478288 ARRDC3Q96B67 414 aa13.28□□□□□ -0.28
ABCF3-212ENST00000478288 C18orf8Q96DM3 657 aa13.28□□□□□ -0.28
ABCF3-212ENST00000478288 BBC3Q96PG8 261 aaPredicted RBP13.28□□□□□ -0.28
ABCF3-212ENST00000478288 UBL7Q96S82 380 aaPredicted RBP13.28□□□□□ -0.28
ABCF3-212ENST00000478288 NDST4Q9H3R1 872 aa13.28□□□□□ -0.28
ABCF3-212ENST00000478288 RETREG1Q9H6L5 497 aa13.28□□□□□ -0.28
ABCF3-212ENST00000478288 USP29Q9HBJ7 922 aa13.28□□□□□ -0.28
ABCF3-212ENST00000478288 IL36AQ9UHA7 158 aa13.28□□□□□ -0.28
ABCF3-212ENST00000478288 CLCA2Q9UQC9 943 aa13.28□□□□□ -0.28
ABCF3-212ENST00000478288 TK2O00142 265 aa13.27□□□□□ -0.29
ABCF3-212ENST00000478288 TRIM38O00635 465 aa13.27□□□□□ -0.29
ABCF3-212ENST00000478288 SLC31A1O15431 190 aa13.27□□□□□ -0.29
ABCF3-212ENST00000478288 RRP8O43159 456 aaKnown RBP13.27□□□□□ -0.29
ABCF3-212ENST00000478288 SMAD6O43541 496 aaKnown RBP13.27□□□□□ -0.29
ABCF3-212ENST00000478288 PIAS2O75928 621 aa13.27□□□□□ -0.29
ABCF3-212ENST00000478288 GP1BAP07359 652 aa13.27□□□□□ -0.29
ABCF3-212ENST00000478288 CKMT1AP12532 417 aa13.27□□□□□ -0.29
ABCF3-212ENST00000478288 CYP11B1P15538 503 aa13.27□□□□□ -0.29
ABCF3-212ENST00000478288 TFE3P19532 575 aaPredicted RBP13.27□□□□□ -0.29
ABCF3-212ENST00000478288 RRM1P23921 792 aa13.27□□□□□ -0.29
ABCF3-212ENST00000478288 ITGB7P26010 798 aa13.27□□□□□ -0.29
ABCF3-212ENST00000478288 OR1E1P30953 314 aa13.27□□□□□ -0.29
ABCF3-212ENST00000478288 RECQLP46063 649 aaPredicted RBP13.27□□□□□ -0.29
ABCF3-212ENST00000478288 SERPINH1P50454 418 aaKnown RBP13.27□□□□□ -0.29
ABCF3-212ENST00000478288 MIIPQ5JXC2 388 aa13.27□□□□□ -0.29
ABCF3-212ENST00000478288 FAM102AQ5T9C2 384 aaPredicted RBP13.27□□□□□ -0.29
ABCF3-212ENST00000478288 KIAA1161Q6NSJ0 714 aa13.27□□□□□ -0.29
ABCF3-212ENST00000478288 RETSATQ6NUM9 610 aa13.27□□□□□ -0.29
ABCF3-212ENST00000478288 GCNT7Q6ZNI0 430 aa13.27□□□□□ -0.29
ABCF3-212ENST00000478288 LRRC69Q6ZNQ3 347 aa13.27□□□□□ -0.29
ABCF3-212ENST00000478288 XYLT1Q86Y38 959 aa13.27□□□□□ -0.29
ABCF3-212ENST00000478288 PLPP6Q8IY26 295 aa13.27□□□□□ -0.29
ABCF3-212ENST00000478288 PCDH20Q8N6Y1 951 aaKnown RBP13.27□□□□□ -0.29
ABCF3-212ENST00000478288 MSANTD4Q8NCY6 345 aa13.27□□□□□ -0.29
ABCF3-212ENST00000478288 LSM14AQ8ND56 463 aaKnown RBP13.27□□□□□ -0.29
ABCF3-212ENST00000478288 TBCBQ99426 244 aa13.27□□□□□ -0.29
ABCF3-212ENST00000478288 NLGN3Q9NZ94 848 aa13.27□□□□□ -0.29
ABCF3-212ENST00000478288 PPARGC1AQ9UBK2 798 aaKnown RBP13.27□□□□□ -0.29
ABCF3-212ENST00000478288 HS3ST3A1Q9Y663 406 aa13.27□□□□□ -0.29
ABCF3-212ENST00000478288 AK5Q9Y6K8 562 aa13.27□□□□□ -0.29
ABCF3-212ENST00000478288 AHCTF1Q8WYP5 2266 aa13.27□□□□□ -0.29
ABCF3-212ENST00000478288 A6NNZ2 444 aa13.26□□□□□ -0.29
ABCF3-212ENST00000478288 K7ERQ8 282 aa13.26□□□□□ -0.29
ABCF3-212ENST00000478288 TLX3O43711 291 aaPredicted RBP13.26□□□□□ -0.29
ABCF3-212ENST00000478288 AP1G1O43747 822 aa13.26□□□□□ -0.29
ABCF3-212ENST00000478288 BNIP3LO60238 219 aa13.26□□□□□ -0.29
ABCF3-212ENST00000478288 LZTS3O60299 673 aaPredicted RBP13.26□□□□□ -0.29
ABCF3-212ENST00000478288 SDC3O75056 442 aa13.26□□□□□ -0.29
ABCF3-212ENST00000478288 ZNF821O75541 412 aaPredicted RBP13.26□□□□□ -0.29
ABCF3-212ENST00000478288 LEFTY1O75610 366 aa13.26□□□□□ -0.29
ABCF3-212ENST00000478288 ZMPSTE24O75844 475 aa13.26□□□□□ -0.29
ABCF3-212ENST00000478288 PNMA6AP0CW24 399 aaPredicted RBP13.26□□□□□ -0.29
ABCF3-212ENST00000478288 GIMD1P0DJR0 217 aa13.26□□□□□ -0.29
ABCF3-212ENST00000478288 ALPPL2P10696 532 aa13.26□□□□□ -0.29
ABCF3-212ENST00000478288 PRLRP16471 622 aa13.26□□□□□ -0.29
ABCF3-212ENST00000478288 GLDCP23378 1020 aa13.26□□□□□ -0.29
ABCF3-212ENST00000478288 ERCC5P28715 1186 aaPredicted RBP13.26□□□□□ -0.29
ABCF3-212ENST00000478288 ETFBP38117 255 aa13.26□□□□□ -0.29
ABCF3-212ENST00000478288 NEK3P51956 506 aa13.26□□□□□ -0.29
ABCF3-212ENST00000478288 CLDN6P56747 220 aa13.26□□□□□ -0.29
ABCF3-212ENST00000478288 RNASE9P60153 205 aaKnown RBP13.26□□□□□ -0.29
ABCF3-212ENST00000478288 RPS21P63220 83 aaKnown RBP13.26□□□□□ -0.29
ABCF3-212ENST00000478288 NRG1Q02297 640 aaPredicted RBP13.26□□□□□ -0.29
ABCF3-212ENST00000478288 SEMG2Q02383 582 aa13.26□□□□□ -0.29
ABCF3-212ENST00000478288 DRAP1Q14919 205 aaPredicted RBP13.26□□□□□ -0.29
ABCF3-212ENST00000478288 CAMK4Q16566 473 aa13.26□□□□□ -0.29
ABCF3-212ENST00000478288 TPD52L1Q16890 204 aaPredicted RBP13.26□□□□□ -0.29
ABCF3-212ENST00000478288 VWA3BQ502W6 1294 aa13.26□□□□□ -0.29
ABCF3-212ENST00000478288 KYAT3Q6YP21 454 aaKnown RBP13.26□□□□□ -0.29
ABCF3-212ENST00000478288 DPY19L3Q6ZPD9 716 aa13.26□□□□□ -0.29
ABCF3-212ENST00000478288 TFAP2DQ7Z6R9 452 aa13.26□□□□□ -0.29
ABCF3-212ENST00000478288 ERICH1Q86X53 443 aa13.26□□□□□ -0.29
ABCF3-212ENST00000478288 SLC22A18ASQ8N1D0 253 aa13.26□□□□□ -0.29
ABCF3-212ENST00000478288 FAM181AQ8N9Y4 354 aa13.26□□□□□ -0.29
ABCF3-212ENST00000478288 CHST14Q8NCH0 376 aa13.26□□□□□ -0.29
ABCF3-212ENST00000478288 OR13H1Q8NG92 308 aa13.26□□□□□ -0.29
ABCF3-212ENST00000478288 FGF11Q92914 225 aa13.26□□□□□ -0.29
ABCF3-212ENST00000478288 ISG20Q96AZ6 181 aaKnown RBP13.26□□□□□ -0.29
ABCF3-212ENST00000478288 DCBLD2Q96PD2 775 aa13.26□□□□□ -0.29
ABCF3-212ENST00000478288 TUBGCP2Q9BSJ2 902 aa13.26□□□□□ -0.29
ABCF3-212ENST00000478288 DUSP23Q9BVJ7 150 aa13.26□□□□□ -0.29
ABCF3-212ENST00000478288 NAA15Q9BXJ9 866 aaKnown RBP13.26□□□□□ -0.29
ABCF3-212ENST00000478288 ZYG11BQ9C0D3 744 aa13.26□□□□□ -0.29
ABCF3-212ENST00000478288 PDCL3Q9H2J4 239 aa13.26□□□□□ -0.29
ABCF3-212ENST00000478288 PRORYQ9H606 182 aa13.26□□□□□ -0.29
ABCF3-212ENST00000478288 PLCB1Q9NQ66 1216 aa13.26□□□□□ -0.29
ABCF3-212ENST00000478288 EVA1BQ9NVM1 165 aa13.26□□□□□ -0.29
ABCF3-212ENST00000478288 MPP6Q9NZW5 540 aa13.26□□□□□ -0.29
ABCF3-212ENST00000478288 TMEM59LQ9UK28 342 aa13.26□□□□□ -0.29
ABCF3-212ENST00000478288 ZFR2Q9UPR6 939 aaKnown RBP13.26□□□□□ -0.29
ABCF3-212ENST00000478288 CA5BQ9Y2D0 317 aa13.26□□□□□ -0.29
ABCF3-212ENST00000478288 WASF2Q9Y6W5 498 aa13.26□□□□□ -0.29
ABCF3-212ENST00000478288 NEMP2A6NFY4 417 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms