RNA–Protein interactions for RNA: ENST00000478050.1

SF3B6-202, Transcript of splicing factor 3b subunit 6, humanhuman

TSL 2

Gene SF3B6, Length 720 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-202ENST00000478050 MRPL45Q9BRJ2 306 aaKnown RBP5.08□□□□□ -1.6
SF3B6-202ENST00000478050 C16orf70Q9BSU1 422 aa5.08□□□□□ -1.6
SF3B6-202ENST00000478050 TSSK1BQ9BXA7 367 aa5.08□□□□□ -1.6
SF3B6-202ENST00000478050 KATNBL1Q9H079 304 aa5.08□□□□□ -1.6
SF3B6-202ENST00000478050 IQCGQ9H095 443 aaKnown RBP5.08□□□□□ -1.6
SF3B6-202ENST00000478050 KCNH6Q9H252 994 aa5.08□□□□□ -1.6
SF3B6-202ENST00000478050 EPHX3Q9H6B9 360 aa5.08□□□□□ -1.6
SF3B6-202ENST00000478050 NRDE2Q9H7Z3 1164 aa5.08□□□□□ -1.6
SF3B6-202ENST00000478050 MANSC1Q9H8J5 431 aa5.08□□□□□ -1.6
SF3B6-202ENST00000478050 EBF2Q9HAK2 575 aa5.08□□□□□ -1.6
SF3B6-202ENST00000478050 USP29Q9HBJ7 922 aa5.08□□□□□ -1.6
SF3B6-202ENST00000478050 POPDC2Q9HBU9 364 aa5.08□□□□□ -1.6
SF3B6-202ENST00000478050 XAB2Q9HCS7 855 aaKnown RBP5.08□□□□□ -1.6
SF3B6-202ENST00000478050 SLCO1B3Q9NPD5 702 aa5.08□□□□□ -1.6
SF3B6-202ENST00000478050 ETNK2Q9NVF9 386 aa5.08□□□□□ -1.6
SF3B6-202ENST00000478050 RCOR3Q9P2K3 495 aaPredicted RBP5.08□□□□□ -1.6
SF3B6-202ENST00000478050 MORF4L1Q9UBU8 362 aa5.08□□□□□ -1.6
SF3B6-202ENST00000478050 LNPEPQ9UIQ6 1025 aa5.08□□□□□ -1.6
SF3B6-202ENST00000478050 ZFP69BQ9UJL9 534 aa5.08□□□□□ -1.6
SF3B6-202ENST00000478050 UBQLN1Q9UMX0 589 aaKnown RBP5.08□□□□□ -1.6
SF3B6-202ENST00000478050 MTO1Q9Y2Z2 717 aaKnown RBP5.08□□□□□ -1.6
SF3B6-202ENST00000478050 TTLL3Q9Y4R7 772 aa5.08□□□□□ -1.6
SF3B6-202ENST00000478050 SNX9Q9Y5X1 595 aa5.08□□□□□ -1.6
SF3B6-202ENST00000478050 FNDC1Q4ZHG4 1894 aaPredicted RBP5.08□□□□□ -1.6
SF3B6-202ENST00000478050 BDP1A6H8Y1 2624 aa5.08□□□□□ -1.6
SF3B6-202ENST00000478050 TDRD15B5MCY1 1934 aaKnown RBP5.07□□□□□ -1.6
SF3B6-202ENST00000478050 PATJQ8NI35 1801 aa5.07□□□□□ -1.6
SF3B6-202ENST00000478050 SMIM35A0A1B0GVV1 85 aa5.07□□□□□ -1.6
SF3B6-202ENST00000478050 FAM159BA6NKW6 160 aa5.07□□□□□ -1.6
SF3B6-202ENST00000478050 A8MXQ7 604 aa5.07□□□□□ -1.6
SF3B6-202ENST00000478050 TRIM49D1C9J1S8 452 aa5.07□□□□□ -1.6
SF3B6-202ENST00000478050 E7ENQ6 273 aa5.07□□□□□ -1.6
SF3B6-202ENST00000478050 I3L4J1 428 aa5.07□□□□□ -1.6
SF3B6-202ENST00000478050 GOLGA8RI6L899 631 aa5.07□□□□□ -1.6
SF3B6-202ENST00000478050 PAPSS1O43252 624 aaPredicted RBP5.07□□□□□ -1.6
SF3B6-202ENST00000478050 DNAJC6O75061 913 aa5.07□□□□□ -1.6
SF3B6-202ENST00000478050 CSDE1O75534 798 aaKnown RBP5.07□□□□□ -1.6
SF3B6-202ENST00000478050 GRAP2O75791 330 aa5.07□□□□□ -1.6
SF3B6-202ENST00000478050 HAUS5O94927 633 aa5.07□□□□□ -1.6
SF3B6-202ENST00000478050 LMNAP02545 664 aaKnown RBP5.07□□□□□ -1.6
SF3B6-202ENST00000478050 APOEP02649 317 aa5.07□□□□□ -1.6
SF3B6-202ENST00000478050 C1QAP02745 245 aa5.07□□□□□ -1.6
SF3B6-202ENST00000478050 PF4P02776 101 aa5.07□□□□□ -1.6
SF3B6-202ENST00000478050 FAM163BP0C2L3 166 aa5.07□□□□□ -1.6
SF3B6-202ENST00000478050 NEFHP12036 1026 aa5.07□□□□□ -1.6
SF3B6-202ENST00000478050 MLNP12872 115 aa5.07□□□□□ -1.6
SF3B6-202ENST00000478050 IL4RP24394 825 aa5.07□□□□□ -1.6
SF3B6-202ENST00000478050 CNTFP26441 200 aa5.07□□□□□ -1.6
SF3B6-202ENST00000478050 HOXD10P28358 340 aa5.07□□□□□ -1.6
SF3B6-202ENST00000478050 PTPN4P29074 926 aa5.07□□□□□ -1.6
SF3B6-202ENST00000478050 ADORA2AP29274 412 aa5.07□□□□□ -1.6
SF3B6-202ENST00000478050 L1CAMP32004 1257 aa5.07□□□□□ -1.6
SF3B6-202ENST00000478050 GRK4P32298 578 aa5.07□□□□□ -1.6
SF3B6-202ENST00000478050 ETFBP38117 255 aa5.07□□□□□ -1.6
SF3B6-202ENST00000478050 ARL4AP40617 200 aa5.07□□□□□ -1.6
SF3B6-202ENST00000478050 PNPLA4P41247 253 aa5.07□□□□□ -1.6
SF3B6-202ENST00000478050 ADCYAP1R1P41586 468 aa5.07□□□□□ -1.6
SF3B6-202ENST00000478050 ETV4P43268 484 aa5.07□□□□□ -1.6
SF3B6-202ENST00000478050 MAGEA3P43357 314 aa5.07□□□□□ -1.6
SF3B6-202ENST00000478050 GCLCP48506 637 aaPredicted RBP5.07□□□□□ -1.6
SF3B6-202ENST00000478050 ARFIP2P53365 341 aa5.07□□□□□ -1.6
SF3B6-202ENST00000478050 HDAC4P56524 1084 aa5.07□□□□□ -1.6
SF3B6-202ENST00000478050 CDK16Q00536 496 aa5.07□□□□□ -1.6
SF3B6-202ENST00000478050 FAAP100Q0VG06 881 aa5.07□□□□□ -1.6
SF3B6-202ENST00000478050 NAB1Q13506 487 aa5.07□□□□□ -1.6
SF3B6-202ENST00000478050 SEMA5AQ13591 1074 aa5.07□□□□□ -1.6
SF3B6-202ENST00000478050 COL9A2Q14055 689 aaPredicted RBP5.07□□□□□ -1.6
SF3B6-202ENST00000478050 PRKD1Q15139 912 aaPredicted RBP5.07□□□□□ -1.6
SF3B6-202ENST00000478050 E2F5Q15329 346 aa5.07□□□□□ -1.6
SF3B6-202ENST00000478050 ZBTB6Q15916 424 aa5.07□□□□□ -1.6
SF3B6-202ENST00000478050 DGKDQ16760 1214 aa5.07□□□□□ -1.6
SF3B6-202ENST00000478050 SV2CQ496J9 727 aa5.07□□□□□ -1.6
SF3B6-202ENST00000478050 DUSP28Q4G0W2 176 aa5.07□□□□□ -1.6
SF3B6-202ENST00000478050 EFHC1Q5JVL4 640 aa5.07□□□□□ -1.6
SF3B6-202ENST00000478050 GJC2Q5T442 439 aaPredicted RBP5.07□□□□□ -1.6
SF3B6-202ENST00000478050 C9orf57Q5W0N0 161 aa5.07□□□□□ -1.6
SF3B6-202ENST00000478050 ATG16L1Q676U5 607 aa5.07□□□□□ -1.6
SF3B6-202ENST00000478050 IQSEC1Q6DN90 963 aa5.07□□□□□ -1.6
SF3B6-202ENST00000478050 PMF1Q6P1K2 205 aa5.07□□□□□ -1.6
SF3B6-202ENST00000478050 NOTUMQ6P988 496 aa5.07□□□□□ -1.6
SF3B6-202ENST00000478050 FBXL19Q6PCT2 694 aa5.07□□□□□ -1.6
SF3B6-202ENST00000478050 ATG14Q6ZNE5 492 aa5.07□□□□□ -1.6
SF3B6-202ENST00000478050 SH2D5Q6ZV89 423 aa5.07□□□□□ -1.6
SF3B6-202ENST00000478050 ANKS3Q6ZW76 656 aa5.07□□□□□ -1.6
SF3B6-202ENST00000478050 MOB2Q70IA6 237 aa5.07□□□□□ -1.6
SF3B6-202ENST00000478050 CATSPER4Q7RTX7 472 aa5.07□□□□□ -1.6
SF3B6-202ENST00000478050 ACOT1Q86TX2 421 aa5.07□□□□□ -1.6
SF3B6-202ENST00000478050 CAND1Q86VP6 1230 aaKnown RBP5.07□□□□□ -1.6
SF3B6-202ENST00000478050 LRRC6Q86X45 466 aa5.07□□□□□ -1.6
SF3B6-202ENST00000478050 PSTKQ8IV42 348 aaKnown RBP5.07□□□□□ -1.6
SF3B6-202ENST00000478050 IGDCC3Q8IVU1 814 aa5.07□□□□□ -1.6
SF3B6-202ENST00000478050 CTAGE3PQ8IX95 158 aa5.07□□□□□ -1.6
SF3B6-202ENST00000478050 HACE1Q8IYU2 909 aa5.07□□□□□ -1.6
SF3B6-202ENST00000478050 CRYBG2Q8N1P7 616 aa5.07□□□□□ -1.6
SF3B6-202ENST00000478050 ZNF276Q8N554 614 aa5.07□□□□□ -1.6
SF3B6-202ENST00000478050 TAB3Q8N5C8 712 aaPredicted RBP5.07□□□□□ -1.6
SF3B6-202ENST00000478050 PPM1NQ8N819 430 aa5.07□□□□□ -1.6
SF3B6-202ENST00000478050 C12orf29Q8N999 325 aa5.07□□□□□ -1.6
SF3B6-202ENST00000478050 ANKRD52Q8NB46 1076 aa5.07□□□□□ -1.6
SF3B6-202ENST00000478050 GOLM1Q8NBJ4 401 aa5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms