RNA–Protein interactions for RNA: ENST00000477649.1

VMA21-203, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

TSL 3

Gene VMA21, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-203ENST00000477649 PRAMEF11O60813 436 aa8.07□□□□□ -1.12
VMA21-203ENST00000477649 LILRB3O75022 631 aa8.07□□□□□ -1.12
VMA21-203ENST00000477649 PAPSS2O95340 614 aaPredicted RBP8.07□□□□□ -1.12
VMA21-203ENST00000477649 GJB5O95377 273 aa8.07□□□□□ -1.12
VMA21-203ENST00000477649 OAS1P00973 400 aaKnown RBP8.07□□□□□ -1.12
VMA21-203ENST00000477649 FGBP02675 491 aa8.07□□□□□ -1.12
VMA21-203ENST00000477649 ADH1AP07327 375 aa8.07□□□□□ -1.12
VMA21-203ENST00000477649 GSTA1P08263 222 aa8.07□□□□□ -1.12
VMA21-203ENST00000477649 HSPA8P11142 646 aaKnown RBP8.07□□□□□ -1.12
VMA21-203ENST00000477649 CSF2RAP15509 400 aa8.07□□□□□ -1.12
VMA21-203ENST00000477649 ADRA1DP25100 572 aa8.07□□□□□ -1.12
VMA21-203ENST00000477649 CRHR1P34998 444 aa8.07□□□□□ -1.12
VMA21-203ENST00000477649 ADRA1AP35348 466 aa8.07□□□□□ -1.12
VMA21-203ENST00000477649 NEK3P51956 506 aa8.07□□□□□ -1.12
VMA21-203ENST00000477649 UBE3AQ05086 875 aa8.07□□□□□ -1.12
VMA21-203ENST00000477649 ANKRD20A4Q4UJ75 823 aa8.07□□□□□ -1.12
VMA21-203ENST00000477649 RALGPS1Q5JS13 557 aa8.07□□□□□ -1.12
VMA21-203ENST00000477649 ADGRF1Q5T601 910 aa8.07□□□□□ -1.12
VMA21-203ENST00000477649 RAP1GAP2Q684P5 730 aa8.07□□□□□ -1.12
VMA21-203ENST00000477649 ALG1LQ6GMV1 187 aa8.07□□□□□ -1.12
VMA21-203ENST00000477649 PKN3Q6P5Z2 889 aa8.07□□□□□ -1.12
VMA21-203ENST00000477649 PSRC1Q6PGN9 363 aaPredicted RBP8.07□□□□□ -1.12
VMA21-203ENST00000477649 RANBP10Q6VN20 620 aa8.07□□□□□ -1.12
VMA21-203ENST00000477649 PACS1Q6VY07 963 aa8.07□□□□□ -1.12
VMA21-203ENST00000477649 KIAA0408Q6ZU52 694 aa8.07□□□□□ -1.12
VMA21-203ENST00000477649 SH2D5Q6ZV89 423 aa8.07□□□□□ -1.12
VMA21-203ENST00000477649 CCDC91Q7Z6B0 441 aa8.07□□□□□ -1.12
VMA21-203ENST00000477649 DNAJB7Q7Z6W7 309 aaPredicted RBP8.07□□□□□ -1.12
VMA21-203ENST00000477649 METTL3Q86U44 580 aaKnown RBP8.07□□□□□ -1.12
VMA21-203ENST00000477649 PRPF39Q86UA1 669 aaKnown RBP8.07□□□□□ -1.12
VMA21-203ENST00000477649 ELMOD1Q8N336 334 aa8.07□□□□□ -1.12
VMA21-203ENST00000477649 MPP5Q8N3R9 675 aa8.07□□□□□ -1.12
VMA21-203ENST00000477649 CCDC33Q8N5R6 958 aa8.07□□□□□ -1.12
VMA21-203ENST00000477649 LEMD2Q8NC56 503 aa8.07□□□□□ -1.12
VMA21-203ENST00000477649 OR52K1Q8NGK4 314 aa8.07□□□□□ -1.12
VMA21-203ENST00000477649 CALML6Q8TD86 181 aa8.07□□□□□ -1.12
VMA21-203ENST00000477649 CLP1Q92989 425 aaKnown RBP8.07□□□□□ -1.12
VMA21-203ENST00000477649 ISL2Q96A47 359 aa8.07□□□□□ -1.12
VMA21-203ENST00000477649 IMP4Q96G21 291 aaKnown RBP8.07□□□□□ -1.12
VMA21-203ENST00000477649 OXNAD1Q96HP4 312 aaPredicted RBP8.07□□□□□ -1.12
VMA21-203ENST00000477649 KLF16Q9BXK1 252 aaPredicted RBP8.07□□□□□ -1.12
VMA21-203ENST00000477649 EMILIN2Q9BXX0 1053 aa8.07□□□□□ -1.12
VMA21-203ENST00000477649 POLR1EQ9GZS1 481 aaKnown RBP8.07□□□□□ -1.12
VMA21-203ENST00000477649 ZBP1Q9H171 429 aa8.07□□□□□ -1.12
VMA21-203ENST00000477649 NOL6Q9H6R4 1146 aaKnown RBP8.07□□□□□ -1.12
VMA21-203ENST00000477649 ACTR5Q9H9F9 607 aaPredicted RBP8.07□□□□□ -1.12
VMA21-203ENST00000477649 PLAC1Q9HBJ0 212 aa8.07□□□□□ -1.12
VMA21-203ENST00000477649 SYBUQ9NX95 663 aa8.07□□□□□ -1.12
VMA21-203ENST00000477649 MPP6Q9NZW5 540 aa8.07□□□□□ -1.12
VMA21-203ENST00000477649 ZNF212Q9UDV6 495 aa8.07□□□□□ -1.12
VMA21-203ENST00000477649 SEPT3Q9UH03 358 aa8.07□□□□□ -1.12
VMA21-203ENST00000477649 MID2Q9UJV3 735 aa8.07□□□□□ -1.12
VMA21-203ENST00000477649 NUDT5Q9UKK9 219 aa8.07□□□□□ -1.12
VMA21-203ENST00000477649 RIMKLBQ9ULI2 386 aa8.07□□□□□ -1.12
VMA21-203ENST00000477649 GRID1Q9ULK0 1009 aa8.07□□□□□ -1.12
VMA21-203ENST00000477649 MAGED2Q9UNF1 606 aaPredicted RBP8.07□□□□□ -1.12
VMA21-203ENST00000477649 STARD13Q9Y3M8 1113 aa8.07□□□□□ -1.12
VMA21-203ENST00000477649 USP15Q9Y4E8 981 aaPredicted RBP8.07□□□□□ -1.12
VMA21-203ENST00000477649 ARIH1Q9Y4X5 557 aaPredicted RBP8.07□□□□□ -1.12
VMA21-203ENST00000477649 INSL5Q9Y5Q6 135 aa8.07□□□□□ -1.12
VMA21-203ENST00000477649 IRAK3Q9Y616 596 aa8.07□□□□□ -1.12
VMA21-203ENST00000477649 COL4A6Q14031 1691 aa8.07□□□□□ -1.12
VMA21-203ENST00000477649 VWA8A3KMH1 1905 aa8.07□□□□□ -1.12
VMA21-203ENST00000477649 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP8.06□□□□□ -1.12
VMA21-203ENST00000477649 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP8.06□□□□□ -1.12
VMA21-203ENST00000477649 A0A1W2PPM1 405 aa8.06□□□□□ -1.12
VMA21-203ENST00000477649 HEATR9A2RTY3 570 aa8.06□□□□□ -1.12
VMA21-203ENST00000477649 TRIM43BA6NCK2 446 aa8.06□□□□□ -1.12
VMA21-203ENST00000477649 TCP11X1B4DZS4 312 aa8.06□□□□□ -1.12
VMA21-203ENST00000477649 ADAM12O43184 909 aa8.06□□□□□ -1.12
VMA21-203ENST00000477649 COCHO43405 550 aa8.06□□□□□ -1.12
VMA21-203ENST00000477649 SNX3O60493 162 aa8.06□□□□□ -1.12
VMA21-203ENST00000477649 SIN3BO75182 1162 aa8.06□□□□□ -1.12
VMA21-203ENST00000477649 GLRA3O75311 464 aa8.06□□□□□ -1.12
VMA21-203ENST00000477649 SPAG7O75391 227 aa8.06□□□□□ -1.12
VMA21-203ENST00000477649 SOAT2O75908 522 aa8.06□□□□□ -1.12
VMA21-203ENST00000477649 STC2O76061 302 aa8.06□□□□□ -1.12
VMA21-203ENST00000477649 FGF18O76093 207 aa8.06□□□□□ -1.12
VMA21-203ENST00000477649 TGDSO95455 350 aa8.06□□□□□ -1.12
VMA21-203ENST00000477649 SEC24AO95486 1093 aa8.06□□□□□ -1.12
VMA21-203ENST00000477649 OLFM2O95897 454 aa8.06□□□□□ -1.12
VMA21-203ENST00000477649 TBX18O95935 607 aa8.06□□□□□ -1.12
VMA21-203ENST00000477649 PEX11BO96011 259 aa8.06□□□□□ -1.12
VMA21-203ENST00000477649 MPOP05164 745 aa8.06□□□□□ -1.12
VMA21-203ENST00000477649 ATP5BP06576 529 aaKnown RBP8.06□□□□□ -1.12
VMA21-203ENST00000477649 APOA4P06727 396 aa8.06□□□□□ -1.12
VMA21-203ENST00000477649 DHRS4L1P0CG22 281 aa8.06□□□□□ -1.12
VMA21-203ENST00000477649 CREB1P16220 341 aa8.06□□□□□ -1.12
VMA21-203ENST00000477649 HOXB8P17481 243 aaPredicted RBP8.06□□□□□ -1.12
VMA21-203ENST00000477649 HLA-DPA1P20036 260 aa8.06□□□□□ -1.12
VMA21-203ENST00000477649 TAC1P20366 129 aa8.06□□□□□ -1.12
VMA21-203ENST00000477649 DDX6P26196 483 aaKnown RBP eCLIP8.06□□□□□ -1.12
VMA21-203ENST00000477649 CDC25CP30307 473 aa8.06□□□□□ -1.12
VMA21-203ENST00000477649 ALDH3A1P30838 453 aa8.06□□□□□ -1.12
VMA21-203ENST00000477649 RPA3P35244 121 aaPredicted RBP8.06□□□□□ -1.12
VMA21-203ENST00000477649 GRIA1P42261 906 aa8.06□□□□□ -1.12
VMA21-203ENST00000477649 SERPINB8P50452 374 aa8.06□□□□□ -1.12
VMA21-203ENST00000477649 WDR4P57081 412 aaKnown RBP8.06□□□□□ -1.12
VMA21-203ENST00000477649 DEFB103AP81534 67 aa8.06□□□□□ -1.12
VMA21-203ENST00000477649 GNA12Q03113 381 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms