RNA–Protein interactions for RNA: ENST00000477461.1

UBR3-209, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 4

Gene UBR3, Length 595 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-209ENST00000477461 RSC1A1Q92681 617 aa4.52□□□□□ -1.69
UBR3-209ENST00000477461 RPS6KC1Q96S38 1066 aa4.52□□□□□ -1.69
UBR3-209ENST00000477461 MPHOSPH6Q99547 160 aaKnown RBP4.52□□□□□ -1.69
UBR3-209ENST00000477461 MEIS3Q99687 375 aa4.52□□□□□ -1.69
UBR3-209ENST00000477461 SPAG4Q9NPE6 437 aa4.52□□□□□ -1.69
UBR3-209ENST00000477461 SLC39A10Q9ULF5 831 aa4.52□□□□□ -1.69
UBR3-209ENST00000477461 LRCH1Q9Y2L9 728 aa4.52□□□□□ -1.69
UBR3-209ENST00000477461 COMMD10Q9Y6G5 202 aa4.52□□□□□ -1.69
UBR3-209ENST00000477461 COL16A1Q07092 1604 aaPredicted RBP4.52□□□□□ -1.69
UBR3-209ENST00000477461 OVOS2A0A0J9YW53 1432 aa4.52□□□□□ -1.69
UBR3-209ENST00000477461 OVOS2Q6IE36 1432 aa4.52□□□□□ -1.69
UBR3-209ENST00000477461 JCADQ9P266 1359 aa4.52□□□□□ -1.69
UBR3-209ENST00000477461 PHRF1Q9P1Y6 1649 aaKnown RBP4.51□□□□□ -1.69
UBR3-209ENST00000477461 LTN1O94822 1766 aa4.51□□□□□ -1.69
UBR3-209ENST00000477461 A0A087WV62 115 aa4.51□□□□□ -1.69
UBR3-209ENST00000477461 A0A1B0GVT2 93 aa4.51□□□□□ -1.69
UBR3-209ENST00000477461 BECN2A8MW95 431 aa4.51□□□□□ -1.69
UBR3-209ENST00000477461 CCER2I3L3R5 266 aa4.51□□□□□ -1.69
UBR3-209ENST00000477461 M0QYT0 321 aa4.51□□□□□ -1.69
UBR3-209ENST00000477461 TAF5LO75529 589 aa4.51□□□□□ -1.69
UBR3-209ENST00000477461 IFNA2P01563 188 aa4.51□□□□□ -1.69
UBR3-209ENST00000477461 CPA1P15085 419 aa4.51□□□□□ -1.69
UBR3-209ENST00000477461 HSPA1LP34931 641 aa4.51□□□□□ -1.69
UBR3-209ENST00000477461 ENTPD1P49961 510 aa4.51□□□□□ -1.69
UBR3-209ENST00000477461 TNFAIP2Q03169 654 aa4.51□□□□□ -1.69
UBR3-209ENST00000477461 PRAMEF19Q5SWL8 479 aa4.51□□□□□ -1.69
UBR3-209ENST00000477461 ANKRD40Q6AI12 368 aa4.51□□□□□ -1.69
UBR3-209ENST00000477461 PGBD2Q6P3X8 592 aa4.51□□□□□ -1.69
UBR3-209ENST00000477461 SLC39A5Q6ZMH5 540 aa4.51□□□□□ -1.69
UBR3-209ENST00000477461 USP43Q70EL4 1123 aa4.51□□□□□ -1.69
UBR3-209ENST00000477461 TTC30AQ86WT1 665 aa4.51□□□□□ -1.69
UBR3-209ENST00000477461 OR52N4Q8NGI2 321 aa4.51□□□□□ -1.69
UBR3-209ENST00000477461 IP6K1Q92551 441 aa4.51□□□□□ -1.69
UBR3-209ENST00000477461 EID2BQ96D98 161 aa4.51□□□□□ -1.69
UBR3-209ENST00000477461 ZNF419Q96HQ0 510 aaPredicted RBP4.51□□□□□ -1.69
UBR3-209ENST00000477461 OSBPL5Q9H0X9 879 aaPredicted RBP4.51□□□□□ -1.69
UBR3-209ENST00000477461 MAGEH1Q9H213 219 aa4.51□□□□□ -1.69
UBR3-209ENST00000477461 MAP6D1Q9H9H5 199 aa4.51□□□□□ -1.69
UBR3-209ENST00000477461 HIF1ANQ9NWT6 349 aa4.51□□□□□ -1.69
UBR3-209ENST00000477461 TAGLN3Q9UI15 199 aa4.51□□□□□ -1.69
UBR3-209ENST00000477461 FBXO4Q9UKT5 387 aa4.51□□□□□ -1.69
UBR3-209ENST00000477461 MYO6Q9UM54 1294 aa4.51□□□□□ -1.69
UBR3-209ENST00000477461 PTGDR2Q9Y5Y4 395 aa4.51□□□□□ -1.69
UBR3-209ENST00000477461 MED1Q15648 1581 aaPredicted RBP4.51□□□□□ -1.69
UBR3-209ENST00000477461 MARF1Q9Y4F3 1742 aaKnown RBP4.51□□□□□ -1.69
UBR3-209ENST00000477461 PNPLA6Q8IY17 1366 aa4.51□□□□□ -1.69
UBR3-209ENST00000477461 SLIT3O75094 1523 aa4.51□□□□□ -1.69
UBR3-209ENST00000477461 SHPRHQ149N8 1683 aa4.51□□□□□ -1.69
UBR3-209ENST00000477461 COL22A1Q8NFW1 1626 aaPredicted RBP4.5□□□□□ -1.69
UBR3-209ENST00000477461 ABCA3Q99758 1704 aa4.5□□□□□ -1.69
UBR3-209ENST00000477461 FOXO6A8MYZ6 492 aa4.5□□□□□ -1.69
UBR3-209ENST00000477461 SPTLC2O15270 562 aa4.5□□□□□ -1.69
UBR3-209ENST00000477461 CER1O95813 267 aa4.5□□□□□ -1.69
UBR3-209ENST00000477461 CYP1A2P05177 515 aa4.5□□□□□ -1.69
UBR3-209ENST00000477461 ITGA5P08648 1049 aa4.5□□□□□ -1.69
UBR3-209ENST00000477461 ALDOCP09972 364 aaKnown RBP4.5□□□□□ -1.69
UBR3-209ENST00000477461 TGM2P21980 687 aa4.5□□□□□ -1.69
UBR3-209ENST00000477461 KCNJ4P48050 445 aa4.5□□□□□ -1.69
UBR3-209ENST00000477461 PCYT1AP49585 367 aa4.5□□□□□ -1.69
UBR3-209ENST00000477461 PMPCAQ10713 525 aa4.5□□□□□ -1.69
UBR3-209ENST00000477461 PTK2BQ14289 1009 aa4.5□□□□□ -1.69
UBR3-209ENST00000477461 STARD3Q14849 445 aa4.5□□□□□ -1.69
UBR3-209ENST00000477461 RRS1Q15050 365 aaKnown RBP4.5□□□□□ -1.69
UBR3-209ENST00000477461 WDR43Q15061 677 aaKnown RBP eCLIP4.5□□□□□ -1.69
UBR3-209ENST00000477461 SLC4A8Q2Y0W8 1093 aa4.5□□□□□ -1.69
UBR3-209ENST00000477461 TTC39AQ5SRH9 613 aa4.5□□□□□ -1.69
UBR3-209ENST00000477461 WDR93Q6P2C0 686 aa4.5□□□□□ -1.69
UBR3-209ENST00000477461 ENAHQ8N8S7 591 aaPredicted RBP4.5□□□□□ -1.69
UBR3-209ENST00000477461 ZBTB8BQ8NAP8 495 aaPredicted RBP4.5□□□□□ -1.69
UBR3-209ENST00000477461 ZNF527Q8NB42 609 aa4.5□□□□□ -1.69
UBR3-209ENST00000477461 LMO3Q8TAP4 145 aa4.5□□□□□ -1.69
UBR3-209ENST00000477461 PAAF1Q9BRP4 392 aa4.5□□□□□ -1.69
UBR3-209ENST00000477461 MDFICQ9P1T7 246 aa4.5□□□□□ -1.69
UBR3-209ENST00000477461 TBC1D14Q9P2M4 693 aa4.5□□□□□ -1.69
UBR3-209ENST00000477461 POLKQ9UBT6 870 aa4.5□□□□□ -1.69
UBR3-209ENST00000477461 CDC23Q9UJX2 597 aa4.5□□□□□ -1.69
UBR3-209ENST00000477461 NUDCQ9Y266 331 aa4.5□□□□□ -1.69
UBR3-209ENST00000477461 RTL1A6NKG5 1358 aa4.5□□□□□ -1.69
UBR3-209ENST00000477461 FLT4P35916 1363 aa4.5□□□□□ -1.69
UBR3-209ENST00000477461 KIF24Q5T7B8 1368 aa4.5□□□□□ -1.69
UBR3-209ENST00000477461 CDK12Q9NYV4 1490 aaPredicted RBP4.49□□□□□ -1.69
UBR3-209ENST00000477461 CRYBG1Q9Y4K1 1723 aa4.49□□□□□ -1.69
UBR3-209ENST00000477461 MAP3K19Q56UN5 1328 aa4.49□□□□□ -1.69
UBR3-209ENST00000477461 SMG6Q86US8 1419 aaKnown RBP4.49□□□□□ -1.69
UBR3-209ENST00000477461 GXYLT2A0PJZ3 443 aa4.49□□□□□ -1.69
UBR3-209ENST00000477461 MDM4O15151 490 aa4.49□□□□□ -1.69
UBR3-209ENST00000477461 FGF3P11487 239 aaPredicted RBP4.49□□□□□ -1.69
UBR3-209ENST00000477461 NPPBP16860 134 aa4.49□□□□□ -1.69
UBR3-209ENST00000477461 CSHL1Q14406 222 aa4.49□□□□□ -1.69
UBR3-209ENST00000477461 ZNF628Q5EBL2 1059 aa4.49□□□□□ -1.69
UBR3-209ENST00000477461 ENTPD8Q5MY95 495 aa4.49□□□□□ -1.69
UBR3-209ENST00000477461 PDXDC1Q6P996 788 aa4.49□□□□□ -1.69
UBR3-209ENST00000477461 C1orf228Q6PIY5 440 aa4.49□□□□□ -1.69
UBR3-209ENST00000477461 PARM1Q6UWI2 310 aa4.49□□□□□ -1.69
UBR3-209ENST00000477461 SLC16A12Q6ZSM3 486 aa4.49□□□□□ -1.69
UBR3-209ENST00000477461 MYLK4Q86YV6 388 aaPredicted RBP4.49□□□□□ -1.69
UBR3-209ENST00000477461 FAM71BQ8TC56 605 aa4.49□□□□□ -1.69
UBR3-209ENST00000477461 C18orf8Q96DM3 657 aa4.49□□□□□ -1.69
UBR3-209ENST00000477461 LTV1Q96GA3 475 aaPredicted RBP4.49□□□□□ -1.69
UBR3-209ENST00000477461 URB1-AS1Q96HZ7 61 aa4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms