RNA–Protein interactions for RNA: ENST00000477413.1

CNIH4-208, Transcript of cornichon family AMPA receptor auxiliary protein 4, humanhuman

TSL 5

Gene CNIH4, Length 820 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH4-208ENST00000477413 IGF2RP11717 2491 aa23.1■■□□□ 1.29
CNIH4-208ENST00000477413 CBX4O00257 560 aa23.1■■□□□ 1.29
CNIH4-208ENST00000477413 RTN2O75298 545 aa23.1■■□□□ 1.29
CNIH4-208ENST00000477413 TRIM16O95361 564 aa23.1■■□□□ 1.29
CNIH4-208ENST00000477413 PTMSP20962 102 aa23.1■■□□□ 1.29
CNIH4-208ENST00000477413 HTR7P34969 479 aa23.1■■□□□ 1.29
CNIH4-208ENST00000477413 PBX1P40424 430 aa23.1■■□□□ 1.29
CNIH4-208ENST00000477413 TAS2R38P59533 333 aa23.1■■□□□ 1.29
CNIH4-208ENST00000477413 FAM193AP78312 1265 aa23.1■■□□□ 1.29
CNIH4-208ENST00000477413 MAMLD1Q13495 774 aa23.1■■□□□ 1.29
CNIH4-208ENST00000477413 KCNT1Q5JUK3 1230 aa23.1■■□□□ 1.29
CNIH4-208ENST00000477413 NAPEPLDQ6IQ20 393 aa23.1■■□□□ 1.29
CNIH4-208ENST00000477413 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP23.1■■□□□ 1.29
CNIH4-208ENST00000477413 DRC7Q8IY82 874 aa23.1■■□□□ 1.29
CNIH4-208ENST00000477413 FNIP1Q8TF40 1166 aa23.1■■□□□ 1.29
CNIH4-208ENST00000477413 ARHGEF2Q92974 986 aaKnown RBP23.1■■□□□ 1.29
CNIH4-208ENST00000477413 HDAC8Q9BY41 377 aa23.1■■□□□ 1.29
CNIH4-208ENST00000477413 WASF2Q9Y6W5 498 aa23.1■■□□□ 1.29
CNIH4-208ENST00000477413 AKAP13Q12802 2813 aa23.1■■□□□ 1.29
CNIH4-208ENST00000477413 DOCK9Q9BZ29 2069 aa23.1■■□□□ 1.29
CNIH4-208ENST00000477413 SPAARA0A1B0GVQ0 90 aa23.09■■□□□ 1.29
CNIH4-208ENST00000477413 SYCE3A1L190 88 aa23.09■■□□□ 1.29
CNIH4-208ENST00000477413 WASH4PA8MWX3 477 aa23.09■■□□□ 1.29
CNIH4-208ENST00000477413 WNT1P04628 370 aa23.09■■□□□ 1.29
CNIH4-208ENST00000477413 CD38P28907 300 aa23.09■■□□□ 1.29
CNIH4-208ENST00000477413 CCT8P50990 548 aa23.09■■□□□ 1.29
CNIH4-208ENST00000477413 OGDHQ02218 1023 aa23.09■■□□□ 1.29
CNIH4-208ENST00000477413 CCDC15Q0P6D6 951 aa23.09■■□□□ 1.29
CNIH4-208ENST00000477413 ASIC2Q16515 512 aa23.09■■□□□ 1.29
CNIH4-208ENST00000477413 EFHC2Q5JST6 749 aa23.09■■□□□ 1.29
CNIH4-208ENST00000477413 SFMBT2Q5VUG0 894 aa23.09■■□□□ 1.29
CNIH4-208ENST00000477413 LAYNQ6UX15 382 aa23.09■■□□□ 1.29
CNIH4-208ENST00000477413 DPY19L3Q6ZPD9 716 aa23.09■■□□□ 1.29
CNIH4-208ENST00000477413 ZNF571Q7Z3V5 609 aaPredicted RBP23.09■■□□□ 1.29
CNIH4-208ENST00000477413 IQCHQ86VS3 1027 aa23.09■■□□□ 1.29
CNIH4-208ENST00000477413 RTL3Q8N8U3 475 aaKnown RBP23.09■■□□□ 1.29
CNIH4-208ENST00000477413 SKA1Q96BD8 255 aa23.09■■□□□ 1.29
CNIH4-208ENST00000477413 TMEM121BQ9BXQ6 578 aaPredicted RBP23.09■■□□□ 1.29
CNIH4-208ENST00000477413 HAUS4Q9H6D7 363 aa23.09■■□□□ 1.29
CNIH4-208ENST00000477413 CBX8Q9HC52 389 aa23.09■■□□□ 1.29
CNIH4-208ENST00000477413 PARVAQ9NVD7 372 aa23.09■■□□□ 1.29
CNIH4-208ENST00000477413 IL36AQ9UHA7 158 aa23.09■■□□□ 1.29
CNIH4-208ENST00000477413 FZD10Q9ULW2 581 aa23.09■■□□□ 1.29
CNIH4-208ENST00000477413 ASPMQ8IZT6 3477 aa23.09■■□□□ 1.29
CNIH4-208ENST00000477413 A0A1W2PQJ5 194 aa23.08■■□□□ 1.29
CNIH4-208ENST00000477413 FAM221BA6H8Z2 402 aa23.08■■□□□ 1.29
CNIH4-208ENST00000477413 EIF3CLB5ME19 914 aaKnown RBP23.08■■□□□ 1.29
CNIH4-208ENST00000477413 RAMP2O60895 175 aa23.08■■□□□ 1.29
CNIH4-208ENST00000477413 TNFAIP3P21580 790 aa23.08■■□□□ 1.29
CNIH4-208ENST00000477413 ACVRL1P37023 503 aa23.08■■□□□ 1.29
CNIH4-208ENST00000477413 OVGP1Q12889 678 aa23.08■■□□□ 1.29
CNIH4-208ENST00000477413 TRIP6Q15654 476 aaKnown RBP23.08■■□□□ 1.29
CNIH4-208ENST00000477413 RWDD4Q6NW29 188 aaKnown RBP23.08■■□□□ 1.29
CNIH4-208ENST00000477413 ADAT2Q7Z6V5 191 aaKnown RBP23.08■■□□□ 1.29
CNIH4-208ENST00000477413 CAMK1GQ96NX5 476 aa23.08■■□□□ 1.29
CNIH4-208ENST00000477413 EIF3CQ99613 913 aaKnown RBP23.08■■□□□ 1.29
CNIH4-208ENST00000477413 SPON2Q9BUD6 331 aa23.08■■□□□ 1.29
CNIH4-208ENST00000477413 MAGEB5Q9BZ81 275 aa23.08■■□□□ 1.29
CNIH4-208ENST00000477413 NOL6Q9H6R4 1146 aaKnown RBP23.08■■□□□ 1.29
CNIH4-208ENST00000477413 TBC1D3DA0A087WVF3 549 aa23.07■■□□□ 1.28
CNIH4-208ENST00000477413 TBC1D3IA0A087WXS9 549 aa23.07■■□□□ 1.28
CNIH4-208ENST00000477413 TBC1D3EA0A087X179 549 aa23.07■■□□□ 1.28
CNIH4-208ENST00000477413 TBC1D3KA0A087X1G2 549 aa23.07■■□□□ 1.28
CNIH4-208ENST00000477413 A0A1B0GTQ1 180 aa23.07■■□□□ 1.28
CNIH4-208ENST00000477413 TBC1D3FA6NER0 549 aaPredicted RBP23.07■■□□□ 1.28
CNIH4-208ENST00000477413 ZSCAN5CA6NGD5 496 aaPredicted RBP23.07■■□□□ 1.28
CNIH4-208ENST00000477413 TBC1D3LB9A6J9 549 aa23.07■■□□□ 1.28
CNIH4-208ENST00000477413 H0Y8X5 98 aa23.07■■□□□ 1.28
CNIH4-208ENST00000477413 PLK4O00444 970 aa23.07■■□□□ 1.28
CNIH4-208ENST00000477413 DKK1O94907 266 aa23.07■■□□□ 1.28
CNIH4-208ENST00000477413 TBC1D3HP0C7X1 549 aa23.07■■□□□ 1.28
CNIH4-208ENST00000477413 DESP17661 470 aa23.07■■□□□ 1.28
CNIH4-208ENST00000477413 ITGB7P26010 798 aa23.07■■□□□ 1.28
CNIH4-208ENST00000477413 RECQLP46063 649 aaPredicted RBP23.07■■□□□ 1.28
CNIH4-208ENST00000477413 FOXC1Q12948 553 aa23.07■■□□□ 1.28
CNIH4-208ENST00000477413 TBC1D3GQ6DHY5 549 aa23.07■■□□□ 1.28
CNIH4-208ENST00000477413 TBC1D3CQ6IPX1 549 aa23.07■■□□□ 1.28
CNIH4-208ENST00000477413 DCUN1D2Q6PH85 259 aa23.07■■□□□ 1.28
CNIH4-208ENST00000477413 TMC6Q7Z403 805 aa23.07■■□□□ 1.28
CNIH4-208ENST00000477413 RAB44Q7Z6P3 723 aaPredicted RBP23.07■■□□□ 1.28
CNIH4-208ENST00000477413 TBC1D3Q8IZP1 549 aaPredicted RBP23.07■■□□□ 1.28
CNIH4-208ENST00000477413 CHST14Q8NCH0 376 aa23.07■■□□□ 1.28
CNIH4-208ENST00000477413 SYN2Q92777 582 aaPredicted RBP23.07■■□□□ 1.28
CNIH4-208ENST00000477413 VOPP1Q96AW1 172 aa23.07■■□□□ 1.28
CNIH4-208ENST00000477413 ARRDC3Q96B67 414 aa23.07■■□□□ 1.28
CNIH4-208ENST00000477413 IQCDQ96DY2 449 aa23.07■■□□□ 1.28
CNIH4-208ENST00000477413 PPP1R16AQ96I34 528 aa23.07■■□□□ 1.28
CNIH4-208ENST00000477413 SERAC1Q96JX3 654 aa23.07■■□□□ 1.28
CNIH4-208ENST00000477413 EPAS1Q99814 870 aa23.07■■□□□ 1.28
CNIH4-208ENST00000477413 ERVMER34-1Q9H9K5 563 aa23.07■■□□□ 1.28
CNIH4-208ENST00000477413 NEUROG3Q9Y4Z2 214 aa23.07■■□□□ 1.28
CNIH4-208ENST00000477413 DDX3XO00571 662 aaKnown RBP eCLIP23.06■■□□□ 1.282e-16■■■■■ 32.4
CNIH4-208ENST00000477413 YKT6O15498 198 aa23.06■■□□□ 1.28
CNIH4-208ENST00000477413 FGF10O15520 208 aaPredicted RBP23.06■■□□□ 1.28
CNIH4-208ENST00000477413 RNGTTO60942 597 aaKnown RBP23.06■■□□□ 1.28
CNIH4-208ENST00000477413 SERPINC1P01008 464 aa23.06■■□□□ 1.28
CNIH4-208ENST00000477413 C21orf59P57076 290 aa23.06■■□□□ 1.28
CNIH4-208ENST00000477413 YBEYP58557 167 aaPredicted RBP23.06■■□□□ 1.28
CNIH4-208ENST00000477413 SUZ12Q15022 739 aaKnown RBP23.06■■□□□ 1.28
CNIH4-208ENST00000477413 SETMARQ53H47 684 aaPredicted RBP23.06■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms