RNA–Protein interactions for RNA: ENST00000477243.1

HMGN4-202, Transcript of high mobility group nucleosomal binding domain 4, humanhuman

TSL 3

Gene HMGN4, Length 113 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4-202ENST00000477243 CCDC187A0A096LP49 1063 aa2.98□□□□□ -1.93
HMGN4-202ENST00000477243 A0A0A0MRY4 1105 aa2.98□□□□□ -1.93
HMGN4-202ENST00000477243 ARPC4-TTLL3A0A0A6YYG9 625 aa2.98□□□□□ -1.93
HMGN4-202ENST00000477243 OR2A25A4D2G3 310 aa2.98□□□□□ -1.93
HMGN4-202ENST00000477243 HTR3EA5X5Y0 456 aa2.98□□□□□ -1.93
HMGN4-202ENST00000477243 A6NL46 340 aa2.98□□□□□ -1.93
HMGN4-202ENST00000477243 FAM170BA6NMN3 283 aa2.98□□□□□ -1.93
HMGN4-202ENST00000477243 ANXA2P2A6NMY6 339 aa2.98□□□□□ -1.93
HMGN4-202ENST00000477243 EIF3CLB5ME19 914 aaKnown RBP2.98□□□□□ -1.93
HMGN4-202ENST00000477243 H7C4K7 107 aa2.98□□□□□ -1.93
HMGN4-202ENST00000477243 M0R082 166 aa2.98□□□□□ -1.93
HMGN4-202ENST00000477243 PLSCR1O15162 318 aa2.98□□□□□ -1.93
HMGN4-202ENST00000477243 ZNF185O15231 689 aa2.98□□□□□ -1.93
HMGN4-202ENST00000477243 CTAGE5O15320 804 aa2.98□□□□□ -1.93
HMGN4-202ENST00000477243 TAF5LO75529 589 aa2.98□□□□□ -1.93
HMGN4-202ENST00000477243 DAB1O75553 588 aa2.98□□□□□ -1.93
HMGN4-202ENST00000477243 MTRF1O75570 445 aaKnown RBP2.98□□□□□ -1.93
HMGN4-202ENST00000477243 PSMD10O75832 226 aa2.98□□□□□ -1.93
HMGN4-202ENST00000477243 CHEK2O96017 543 aa2.98□□□□□ -1.93
HMGN4-202ENST00000477243 ALPPP05187 535 aa2.98□□□□□ -1.93
HMGN4-202ENST00000477243 INHBAP08476 426 aa2.98□□□□□ -1.93
HMGN4-202ENST00000477243 NFICP08651 508 aa2.98□□□□□ -1.93
HMGN4-202ENST00000477243 ENO2P09104 434 aaPredicted RBP2.98□□□□□ -1.93
HMGN4-202ENST00000477243 SUPT20HL2P0C7V6 817 aa2.98□□□□□ -1.93
HMGN4-202ENST00000477243 PRR35P0CG20 571 aa2.98□□□□□ -1.93
HMGN4-202ENST00000477243 ALPPL2P10696 532 aa2.98□□□□□ -1.93
HMGN4-202ENST00000477243 PTPN3P26045 913 aa2.98□□□□□ -1.93
HMGN4-202ENST00000477243 RPL10P27635 214 aaKnown RBP2.98□□□□□ -1.93
HMGN4-202ENST00000477243 CCND2P30279 289 aa2.98□□□□□ -1.93
HMGN4-202ENST00000477243 GDI1P31150 447 aa2.98□□□□□ -1.93
HMGN4-202ENST00000477243 HOXA13P31271 388 aaPredicted RBP2.98□□□□□ -1.93
HMGN4-202ENST00000477243 TTKP33981 857 aa2.98□□□□□ -1.93
HMGN4-202ENST00000477243 RDXP35241 583 aaKnown RBP2.98□□□□□ -1.93
HMGN4-202ENST00000477243 VIPR2P41587 438 aa2.98□□□□□ -1.93
HMGN4-202ENST00000477243 ARCN1P48444 511 aaKnown RBP2.98□□□□□ -1.93
HMGN4-202ENST00000477243 PCP4P48539 62 aa2.98□□□□□ -1.93
HMGN4-202ENST00000477243 PTDSS1P48651 473 aaKnown RBP2.98□□□□□ -1.93
HMGN4-202ENST00000477243 VPS41P49754 854 aa2.98□□□□□ -1.93
HMGN4-202ENST00000477243 NPY4RP50391 375 aa2.98□□□□□ -1.93
HMGN4-202ENST00000477243 STAT5BP51692 787 aa2.98□□□□□ -1.93
HMGN4-202ENST00000477243 GBX2P52951 348 aaPredicted RBP2.98□□□□□ -1.93
HMGN4-202ENST00000477243 CASP9P55211 416 aa2.98□□□□□ -1.93
HMGN4-202ENST00000477243 ERVFC1P60507 584 aa2.98□□□□□ -1.93
HMGN4-202ENST00000477243 ASIC1P78348 528 aa2.98□□□□□ -1.93
HMGN4-202ENST00000477243 RUNX1T1Q06455 604 aa2.98□□□□□ -1.93
HMGN4-202ENST00000477243 CD69Q07108 199 aa2.98□□□□□ -1.93
HMGN4-202ENST00000477243 KCNMA1Q12791 1236 aa2.98□□□□□ -1.93
HMGN4-202ENST00000477243 KIF5AQ12840 1032 aa2.98□□□□□ -1.93
HMGN4-202ENST00000477243 MTM1Q13496 603 aa2.98□□□□□ -1.93
HMGN4-202ENST00000477243 IDI1Q13907 227 aa2.98□□□□□ -1.93
HMGN4-202ENST00000477243 GAMTQ14353 236 aa2.98□□□□□ -1.93
HMGN4-202ENST00000477243 MXD4Q14582 209 aaPredicted RBP2.98□□□□□ -1.93
HMGN4-202ENST00000477243 SLC15A2Q16348 729 aa2.98□□□□□ -1.93
HMGN4-202ENST00000477243 PKN1Q16512 942 aa2.98□□□□□ -1.93
HMGN4-202ENST00000477243 MAJINQ3KP22 176 aa2.98□□□□□ -1.93
HMGN4-202ENST00000477243 MGAT5BQ3V5L5 792 aa2.98□□□□□ -1.93
HMGN4-202ENST00000477243 SUPT20HL1Q3ZLR7 823 aa2.98□□□□□ -1.93
HMGN4-202ENST00000477243 FILIP1LQ4L180 1135 aa2.98□□□□□ -1.93
HMGN4-202ENST00000477243 LRRC24Q50LG9 513 aa2.98□□□□□ -1.93
HMGN4-202ENST00000477243 USP39Q53GS9 565 aaKnown RBP2.98□□□□□ -1.93
HMGN4-202ENST00000477243 TPGS2Q68CL5 300 aa2.98□□□□□ -1.93
HMGN4-202ENST00000477243 OTUD7BQ6GQQ9 843 aa2.98□□□□□ -1.93
HMGN4-202ENST00000477243 PSRC1Q6PGN9 363 aaPredicted RBP2.98□□□□□ -1.93
HMGN4-202ENST00000477243 MTHFD1LQ6UB35 978 aa2.98□□□□□ -1.93
HMGN4-202ENST00000477243 TMEM270Q6UE05 265 aa2.98□□□□□ -1.93
HMGN4-202ENST00000477243 ZDHHC24Q6UX98 284 aa2.98□□□□□ -1.93
HMGN4-202ENST00000477243 CRELD2Q6UXH1 353 aaPredicted RBP2.98□□□□□ -1.93
HMGN4-202ENST00000477243 ABHD15Q6UXT9 468 aa2.98□□□□□ -1.93
HMGN4-202ENST00000477243 ATG14Q6ZNE5 492 aa2.98□□□□□ -1.93
HMGN4-202ENST00000477243 RBPMS2Q6ZRY4 209 aaKnown RBP2.98□□□□□ -1.93
HMGN4-202ENST00000477243 ACAD11Q709F0 780 aa2.98□□□□□ -1.93
HMGN4-202ENST00000477243 TAS1R1Q7RTX1 841 aa2.98□□□□□ -1.93
HMGN4-202ENST00000477243 SPATA19Q7Z5L4 167 aa2.98□□□□□ -1.93
HMGN4-202ENST00000477243 USP37Q86T82 979 aa2.98□□□□□ -1.93
HMGN4-202ENST00000477243 GAS2L3Q86XJ1 694 aa2.98□□□□□ -1.93
HMGN4-202ENST00000477243 RFX6Q8HWS3 928 aa2.98□□□□□ -1.93
HMGN4-202ENST00000477243 P3H2Q8IVL5 708 aa2.98□□□□□ -1.93
HMGN4-202ENST00000477243 LINC00346Q8IVM7 164 aa2.98□□□□□ -1.93
HMGN4-202ENST00000477243 CNTN4Q8IWV2 1026 aa2.98□□□□□ -1.93
HMGN4-202ENST00000477243 KLHL7Q8IXQ5 586 aa2.98□□□□□ -1.93
HMGN4-202ENST00000477243 SP8Q8IXZ3 490 aa2.98□□□□□ -1.93
HMGN4-202ENST00000477243 FBXW8Q8N3Y1 598 aa2.98□□□□□ -1.93
HMGN4-202ENST00000477243 FSTL5Q8N475 847 aaPredicted RBP2.98□□□□□ -1.93
HMGN4-202ENST00000477243 ZGPATQ8N5A5 531 aaKnown RBP2.98□□□□□ -1.93
HMGN4-202ENST00000477243 POU5F2Q8N7G0 328 aa2.98□□□□□ -1.93
HMGN4-202ENST00000477243 FAM181AQ8N9Y4 354 aa2.98□□□□□ -1.93
HMGN4-202ENST00000477243 TMEM116Q8NCL8 245 aa2.98□□□□□ -1.93
HMGN4-202ENST00000477243 ZNF417Q8TAU3 575 aa2.98□□□□□ -1.93
HMGN4-202ENST00000477243 URGCPQ8TCY9 931 aa2.98□□□□□ -1.93
HMGN4-202ENST00000477243 RAPGEF4Q8WZA2 1011 aa2.98□□□□□ -1.93
HMGN4-202ENST00000477243 PRCCQ92733 491 aaPredicted RBP2.98□□□□□ -1.93
HMGN4-202ENST00000477243 KLHL29Q96CT2 875 aa2.98□□□□□ -1.93
HMGN4-202ENST00000477243 ELP4Q96EB1 424 aa2.98□□□□□ -1.93
HMGN4-202ENST00000477243 MASTLQ96GX5 879 aa2.98□□□□□ -1.93
HMGN4-202ENST00000477243 PRR11Q96HE9 360 aaPredicted RBP2.98□□□□□ -1.93
HMGN4-202ENST00000477243 DYDC2Q96IM9 177 aa2.98□□□□□ -1.93
HMGN4-202ENST00000477243 GUCD1Q96NT3 240 aa2.98□□□□□ -1.93
HMGN4-202ENST00000477243 ZNF587Q96SQ5 575 aaPredicted RBP2.98□□□□□ -1.93
HMGN4-202ENST00000477243 PKP4Q99569 1192 aa2.98□□□□□ -1.93
HMGN4-202ENST00000477243 MGME1Q9BQP7 344 aa2.98□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms