RNA–Protein interactions for RNA: ENST00000476594.1

CCM2-208, Transcript of CCM2 scaffold protein, human

TSL 3

Gene CCM2, Length 533 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCM2-208	ENST00000476594	NEK5	Q6P3R8	708 aa		10.43	□□□□□ -0.74
CCM2-208	ENST00000476594	RAB11FIP1	Q6WKZ4	1283 aa	Predicted RBP	10.43	□□□□□ -0.74
CCM2-208	ENST00000476594	PSTK	Q8IV42	348 aa	Known RBP	10.43	□□□□□ -0.74
CCM2-208	ENST00000476594	OXR1	Q8N573	874 aa		10.43	□□□□□ -0.74
CCM2-208	ENST00000476594	CCDC185	Q8N715	623 aa		10.43	□□□□□ -0.74
CCM2-208	ENST00000476594	OR52K2	Q8NGK3	314 aa		10.43	□□□□□ -0.74
CCM2-208	ENST00000476594	ISG20	Q96AZ6	181 aa	Known RBP	10.43	□□□□□ -0.74
CCM2-208	ENST00000476594	LRIG1	Q96JA1	1093 aa		10.43	□□□□□ -0.74
CCM2-208	ENST00000476594	HEPH	Q9BQS7	1158 aa		10.43	□□□□□ -0.74
CCM2-208	ENST00000476594	SYT11	Q9BT88	431 aa		10.43	□□□□□ -0.74
CCM2-208	ENST00000476594	TSPY26P	Q9H489	355 aa		10.43	□□□□□ -0.74
CCM2-208	ENST00000476594	DEF6	Q9H4E7	631 aa		10.43	□□□□□ -0.74
CCM2-208	ENST00000476594	GAREM1	Q9H706	876 aa		10.43	□□□□□ -0.74
CCM2-208	ENST00000476594	TM9SF3	Q9HD45	589 aa		10.43	□□□□□ -0.74
CCM2-208	ENST00000476594	AASDHPPT	Q9NRN7	309 aa		10.43	□□□□□ -0.74
CCM2-208	ENST00000476594	IFNK	Q9P0W0	207 aa		10.43	□□□□□ -0.74
CCM2-208	ENST00000476594	DNAI1	Q9UI46	699 aa		10.43	□□□□□ -0.74
CCM2-208	ENST00000476594	LCMT1	Q9UIC8	334 aa		10.43	□□□□□ -0.74
CCM2-208	ENST00000476594	PPM1H	Q9ULR3	514 aa		10.43	□□□□□ -0.74
CCM2-208	ENST00000476594	FZD10	Q9ULW2	581 aa		10.43	□□□□□ -0.74
CCM2-208	ENST00000476594	NCOR2	Q9Y618	2525 aa		10.42	□□□□□ -0.74
CCM2-208	ENST00000476594	EEF2K	O00418	725 aa	Known RBP	10.42	□□□□□ -0.74
CCM2-208	ENST00000476594	FLRT2	O43155	660 aa		10.42	□□□□□ -0.74
CCM2-208	ENST00000476594	PLRG1	O43660	514 aa	Known RBP	10.42	□□□□□ -0.74
CCM2-208	ENST00000476594	RNGTT	O60942	597 aa	Known RBP	10.42	□□□□□ -0.74
CCM2-208	ENST00000476594	TRIM16	O95361	564 aa		10.42	□□□□□ -0.74
CCM2-208	ENST00000476594	VAV1	P15498	845 aa		10.42	□□□□□ -0.74
CCM2-208	ENST00000476594	CCT8	P50990	548 aa		10.42	□□□□□ -0.74
CCM2-208	ENST00000476594	NEK3	P51956	506 aa		10.42	□□□□□ -0.74
CCM2-208	ENST00000476594	OVGP1	Q12889	678 aa		10.42	□□□□□ -0.74
CCM2-208	ENST00000476594	SEMA3B	Q13214	749 aa		10.42	□□□□□ -0.74
CCM2-208	ENST00000476594	NFKBIB	Q15653	356 aa		10.42	□□□□□ -0.74
CCM2-208	ENST00000476594	CARD16	Q5EG05	197 aa		10.42	□□□□□ -0.74
CCM2-208	ENST00000476594	ERMARD	Q5T6L9	678 aa		10.42	□□□□□ -0.74
CCM2-208	ENST00000476594	NAPEPLD	Q6IQ20	393 aa		10.42	□□□□□ -0.74
CCM2-208	ENST00000476594	LINGO4	Q6UY18	593 aa		10.42	□□□□□ -0.74
CCM2-208	ENST00000476594	NLRP14	Q86W24	1093 aa		10.42	□□□□□ -0.74
CCM2-208	ENST00000476594	TRIM69	Q86WT6	500 aa		10.42	□□□□□ -0.74
CCM2-208	ENST00000476594	PLPP6	Q8IY26	295 aa		10.42	□□□□□ -0.74
CCM2-208	ENST00000476594	RYBP	Q8N488	228 aa	Predicted RBP	10.42	□□□□□ -0.74
CCM2-208	ENST00000476594	AADAT	Q8N5Z0	425 aa		10.42	□□□□□ -0.74
CCM2-208	ENST00000476594	OR2A12	Q8NGT7	310 aa		10.42	□□□□□ -0.74
CCM2-208	ENST00000476594	CPLX3	Q8WVH0	158 aa		10.42	□□□□□ -0.74
CCM2-208	ENST00000476594	ARHGEF2	Q92974	986 aa	Known RBP	10.42	□□□□□ -0.74
CCM2-208	ENST00000476594	ARHGEF26	Q96DR7	871 aa		10.42	□□□□□ -0.74
CCM2-208	ENST00000476594	OSBPL1A	Q9BXW6	950 aa		10.42	□□□□□ -0.74
CCM2-208	ENST00000476594	ISCU	Q9H1K1	167 aa		10.42	□□□□□ -0.74
CCM2-208	ENST00000476594	ZWILCH	Q9H900	591 aa		10.42	□□□□□ -0.74
CCM2-208	ENST00000476594	TM7SF3	Q9NS93	570 aa		10.42	□□□□□ -0.74
CCM2-208	ENST00000476594	TAS2R14	Q9NYV8	317 aa		10.42	□□□□□ -0.74
CCM2-208	ENST00000476594	ZNF212	Q9UDV6	495 aa		10.42	□□□□□ -0.74
CCM2-208	ENST00000476594	SERGEF	Q9UGK8	458 aa		10.42	□□□□□ -0.74
CCM2-208	ENST00000476594	ANGPTL2	Q9UKU9	493 aa		10.42	□□□□□ -0.74
CCM2-208	ENST00000476594	AP4E1	Q9UPM8	1137 aa		10.42	□□□□□ -0.74
CCM2-208	ENST00000476594	ANKRD6	Q9Y2G4	727 aa		10.42	□□□□□ -0.74
CCM2-208	ENST00000476594	PCDHGB2	Q9Y5G2	931 aa		10.42	□□□□□ -0.74
CCM2-208	ENST00000476594	LAMA1	P25391	3075 aa		10.42	□□□□□ -0.74
CCM2-208	ENST00000476594	DOCK4	Q8N1I0	1966 aa		10.42	□□□□□ -0.74
CCM2-208	ENST00000476594	NYNRIN	Q9P2P1	1898 aa	Known RBP	10.42	□□□□□ -0.74
CCM2-208	ENST00000476594		A0A1B0GVT2	93 aa		10.41	□□□□□ -0.74
CCM2-208	ENST00000476594	TMEM191C	A6NGB0	347 aa		10.41	□□□□□ -0.74
CCM2-208	ENST00000476594	ARHGAP42	A6NI28	874 aa		10.41	□□□□□ -0.74
CCM2-208	ENST00000476594	WASH4P	A8MWX3	477 aa		10.41	□□□□□ -0.74
CCM2-208	ENST00000476594	FAM72C	H0Y354	149 aa		10.41	□□□□□ -0.74
CCM2-208	ENST00000476594	DDX3X	O00571	662 aa	Known RBP eCLIP	10.41	□□□□□ -0.74
CCM2-208	ENST00000476594	VILL	O15195	856 aa		10.41	□□□□□ -0.74
CCM2-208	ENST00000476594	ATMIN	O43313	823 aa	Predicted RBP	10.41	□□□□□ -0.74
CCM2-208	ENST00000476594	BUB1	O43683	1085 aa		10.41	□□□□□ -0.74
CCM2-208	ENST00000476594	KDELR3	O43731	214 aa		10.41	□□□□□ -0.74
CCM2-208	ENST00000476594	ZMPSTE24	O75844	475 aa		10.41	□□□□□ -0.74
CCM2-208	ENST00000476594	IGSF6	O95976	241 aa		10.41	□□□□□ -0.74
CCM2-208	ENST00000476594	GSR	P00390	522 aa		10.41	□□□□□ -0.74
CCM2-208	ENST00000476594	MT-CO1	P00395	513 aa		10.41	□□□□□ -0.74
CCM2-208	ENST00000476594	IGHV4-34	P06331	123 aa		10.41	□□□□□ -0.74
CCM2-208	ENST00000476594	SKIL	P12757	684 aa		10.41	□□□□□ -0.74
CCM2-208	ENST00000476594	CD38	P28907	300 aa		10.41	□□□□□ -0.74
CCM2-208	ENST00000476594	DRD3	P35462	400 aa		10.41	□□□□□ -0.74
CCM2-208	ENST00000476594	PCK1	P35558	622 aa		10.41	□□□□□ -0.74
CCM2-208	ENST00000476594	PBX1	P40424	430 aa		10.41	□□□□□ -0.74
CCM2-208	ENST00000476594	ARL4A	P40617	200 aa		10.41	□□□□□ -0.74
CCM2-208	ENST00000476594	ARRB1	P49407	418 aa	Predicted RBP	10.41	□□□□□ -0.74
CCM2-208	ENST00000476594	CSNK1E	P49674	416 aa	Known RBP	10.41	□□□□□ -0.74
CCM2-208	ENST00000476594	NDST2	P52849	883 aa		10.41	□□□□□ -0.74
CCM2-208	ENST00000476594	ARF5	P84085	180 aa		10.41	□□□□□ -0.74
CCM2-208	ENST00000476594	CNTN1	Q12860	1018 aa		10.41	□□□□□ -0.74
CCM2-208	ENST00000476594	PIGH	Q14442	188 aa	Predicted RBP	10.41	□□□□□ -0.74
CCM2-208	ENST00000476594	STAT4	Q14765	748 aa		10.41	□□□□□ -0.74
CCM2-208	ENST00000476594	GRM3	Q14832	879 aa		10.41	□□□□□ -0.74
CCM2-208	ENST00000476594	INO80D	Q53TQ3	878 aa	Predicted RBP	10.41	□□□□□ -0.74
CCM2-208	ENST00000476594	FAM72A	Q5TYM5	149 aa		10.41	□□□□□ -0.74
CCM2-208	ENST00000476594	SPECC1L	Q69YQ0	1117 aa		10.41	□□□□□ -0.74
CCM2-208	ENST00000476594	FAM72D	Q6L9T8	149 aa		10.41	□□□□□ -0.74
CCM2-208	ENST00000476594	FBXL19	Q6PCT2	694 aa		10.41	□□□□□ -0.74
CCM2-208	ENST00000476594	ERN2	Q76MJ5	926 aa	Known RBP	10.41	□□□□□ -0.74
CCM2-208	ENST00000476594	IQCH	Q86VS3	1027 aa		10.41	□□□□□ -0.74
CCM2-208	ENST00000476594	FAM72B	Q86X60	149 aa		10.41	□□□□□ -0.74
CCM2-208	ENST00000476594	DEFB124	Q8NES8	71 aa		10.41	□□□□□ -0.74
CCM2-208	ENST00000476594	OR2AP1	Q8NGE2	309 aa		10.41	□□□□□ -0.74
CCM2-208	ENST00000476594	FAM174A	Q8TBP5	190 aa		10.41	□□□□□ -0.74
CCM2-208	ENST00000476594	GRIN3A	Q8TCU5	1115 aa		10.41	□□□□□ -0.74

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