RNA–Protein interactions for RNA: ENST00000476342.1

HOXB3-208, Transcript of homeobox B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXB3, Length 1,420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-208ENST00000476342 TP53INP2Q8IXH6 220 aa30.12■■■□□ 2.41
HOXB3-208ENST00000476342 TRIM58Q8NG06 486 aa30.12■■■□□ 2.41
HOXB3-208ENST00000476342 OR8D1Q8WZ84 308 aa30.12■■■□□ 2.41
HOXB3-208ENST00000476342 ATOH1Q92858 354 aaPredicted RBP30.12■■■□□ 2.41
HOXB3-208ENST00000476342 RSPH9Q9H1X1 276 aaPredicted RBP30.12■■■□□ 2.41
HOXB3-208ENST00000476342 EML5Q05BV3 1969 aa30.11■■■□□ 2.41
HOXB3-208ENST00000476342 J3KR12 359 aa30.11■■■□□ 2.41
HOXB3-208ENST00000476342 BNIP3LO60238 219 aa30.11■■■□□ 2.41
HOXB3-208ENST00000476342 MX2P20592 715 aa30.11■■■□□ 2.41
HOXB3-208ENST00000476342 CNR2P34972 360 aa30.11■■■□□ 2.41
HOXB3-208ENST00000476342 CETN2P41208 172 aa30.11■■■□□ 2.41
HOXB3-208ENST00000476342 PEX5P50542 639 aa30.11■■■□□ 2.41
HOXB3-208ENST00000476342 PPP2R5EQ16537 467 aa30.11■■■□□ 2.41
HOXB3-208ENST00000476342 USP39Q53GS9 565 aaKnown RBP30.11■■■□□ 2.41
HOXB3-208ENST00000476342 ZNF776Q68DI1 518 aaPredicted RBP30.11■■■□□ 2.41
HOXB3-208ENST00000476342 DSG4Q86SJ6 1040 aa30.11■■■□□ 2.41
HOXB3-208ENST00000476342 PLD5Q8N7P1 536 aa30.11■■■□□ 2.41
HOXB3-208ENST00000476342 SLC6A17Q9H1V8 727 aa30.11■■■□□ 2.41
HOXB3-208ENST00000476342 PACSIN2Q9UNF0 486 aaPredicted RBP30.11■■■□□ 2.41
HOXB3-208ENST00000476342 ALOX15BO15296 676 aa30.1■■■□□ 2.41
HOXB3-208ENST00000476342 TMCC1O94876 653 aa30.1■■■□□ 2.41
HOXB3-208ENST00000476342 ACADMP11310 421 aa30.1■■■□□ 2.41
HOXB3-208ENST00000476342 ZBTB16Q05516 673 aa30.1■■■□□ 2.41
HOXB3-208ENST00000476342 BYSLQ13895 437 aaKnown RBP30.1■■■□□ 2.41
HOXB3-208ENST00000476342 ARHGAP36Q6ZRI8 547 aa30.1■■■□□ 2.41
HOXB3-208ENST00000476342 STK40Q8N2I9 435 aa30.1■■■□□ 2.41
HOXB3-208ENST00000476342 HES6Q96HZ4 224 aa30.1■■■□□ 2.41
HOXB3-208ENST00000476342 TNKS2Q9H2K2 1166 aa30.1■■■□□ 2.41
HOXB3-208ENST00000476342 hCG_1818297A0A087WSY0 165 aa30.09■■■□□ 2.41
HOXB3-208ENST00000476342 MCF2LO15068 1137 aa30.09■■■□□ 2.41
HOXB3-208ENST00000476342 ZNF217O75362 1048 aa30.09■■■□□ 2.41
HOXB3-208ENST00000476342 C7P10643 843 aa30.09■■■□□ 2.41
HOXB3-208ENST00000476342 DNA2P51530 1060 aa30.09■■■□□ 2.41
HOXB3-208ENST00000476342 GBE1Q04446 702 aa30.09■■■□□ 2.41
HOXB3-208ENST00000476342 GALNT2Q10471 571 aa30.09■■■□□ 2.41
HOXB3-208ENST00000476342 RFTN1Q14699 578 aaPredicted RBP30.09■■■□□ 2.41
HOXB3-208ENST00000476342 KAZNQ674X7 775 aa30.09■■■□□ 2.41
HOXB3-208ENST00000476342 CACUL1Q86Y37 369 aa30.09■■■□□ 2.41
HOXB3-208ENST00000476342 OR2A12Q8NGT7 310 aa30.09■■■□□ 2.41
HOXB3-208ENST00000476342 ZNF599Q96NL3 588 aa30.09■■■□□ 2.41
HOXB3-208ENST00000476342 ARIH1Q9Y4X5 557 aaPredicted RBP30.09■■■□□ 2.41
HOXB3-208ENST00000476342 SHROOM3Q8TF72 1996 aa30.09■■■□□ 2.41
HOXB3-208ENST00000476342 LILRB5O75023 590 aa30.08■■■□□ 2.41
HOXB3-208ENST00000476342 DNTTP04053 509 aa30.08■■■□□ 2.41
HOXB3-208ENST00000476342 KRT10P13645 584 aa30.08■■■□□ 2.41
HOXB3-208ENST00000476342 GARSP41250 739 aaKnown RBP30.08■■■□□ 2.41
HOXB3-208ENST00000476342 SNRPD1P62314 119 aaKnown RBP30.08■■■□□ 2.41
HOXB3-208ENST00000476342 DYNLT1P63172 113 aa30.08■■■□□ 2.41
HOXB3-208ENST00000476342 TTC31Q49AM3 519 aaPredicted RBP30.08■■■□□ 2.41
HOXB3-208ENST00000476342 PLPP6Q8IY26 295 aa30.08■■■□□ 2.41
HOXB3-208ENST00000476342 NSMCE1Q8WV22 266 aa30.08■■■□□ 2.41
HOXB3-208ENST00000476342 ALG3Q92685 438 aa30.08■■■□□ 2.41
HOXB3-208ENST00000476342 SPACA7Q96KW9 195 aa30.08■■■□□ 2.41
HOXB3-208ENST00000476342 FAM129BQ96TA1 746 aa30.08■■■□□ 2.41
HOXB3-208ENST00000476342 TM6SF2Q9BZW4 377 aa30.08■■■□□ 2.41
HOXB3-208ENST00000476342 DTLQ9NZJ0 730 aa30.08■■■□□ 2.41
HOXB3-208ENST00000476342 SCML1Q9UN30 329 aa30.08■■■□□ 2.41
HOXB3-208ENST00000476342 HEY1Q9Y5J3 304 aa30.08■■■□□ 2.41
HOXB3-208ENST00000476342 MAFKO60675 156 aa30.07■■■□□ 2.4
HOXB3-208ENST00000476342 CST8O60676 142 aa30.07■■■□□ 2.4
HOXB3-208ENST00000476342 ZNF821O75541 412 aaPredicted RBP30.07■■■□□ 2.4
HOXB3-208ENST00000476342 RHOAP61586 193 aa30.07■■■□□ 2.4
HOXB3-208ENST00000476342 RPS14P62263 151 aaKnown RBP30.07■■■□□ 2.4
HOXB3-208ENST00000476342 CARD16Q5EG05 197 aa30.07■■■□□ 2.4
HOXB3-208ENST00000476342 BZW1Q7L1Q6 419 aaKnown RBP30.07■■■□□ 2.4
HOXB3-208ENST00000476342 MMAAQ8IVH4 418 aaKnown RBP30.07■■■□□ 2.4
HOXB3-208ENST00000476342 OR2AP1Q8NGE2 309 aa30.07■■■□□ 2.4
HOXB3-208ENST00000476342 GAB3Q8WWW8 586 aa30.07■■■□□ 2.4
HOXB3-208ENST00000476342 EFR3BQ9Y2G0 817 aa30.07■■■□□ 2.4
HOXB3-208ENST00000476342 R4GN57 208 aa30.07■■■□□ 2.4
HOXB3-208ENST00000476342 PLXND1Q9Y4D7 1925 aa30.06■■■□□ 2.4
HOXB3-208ENST00000476342 DDX3YO15523 660 aaKnown RBP30.06■■■□□ 2.4
HOXB3-208ENST00000476342 RPP40O75818 363 aaKnown RBP30.06■■■□□ 2.4
HOXB3-208ENST00000476342 MAP3K6O95382 1288 aa30.06■■■□□ 2.4
HOXB3-208ENST00000476342 GSRP00390 522 aa30.06■■■□□ 2.4
HOXB3-208ENST00000476342 TGM2P21980 687 aa30.06■■■□□ 2.4
HOXB3-208ENST00000476342 SFSWAPQ12872 951 aaKnown RBP30.06■■■□□ 2.4
HOXB3-208ENST00000476342 CST6Q15828 149 aa30.06■■■□□ 2.4
HOXB3-208ENST00000476342 TMCO4Q5TGY1 634 aa30.06■■■□□ 2.4
HOXB3-208ENST00000476342 TIGD7Q6NT04 549 aaPredicted RBP30.06■■■□□ 2.4
HOXB3-208ENST00000476342 REXO1L1PQ8IX06 675 aa30.06■■■□□ 2.4
HOXB3-208ENST00000476342 C1QTNF3-AMACRE9PGA6 284 aa30.05■■■□□ 2.4
HOXB3-208ENST00000476342 IGSF6O95976 241 aa30.05■■■□□ 2.4
HOXB3-208ENST00000476342 ADH1BP00325 375 aa30.05■■■□□ 2.4
HOXB3-208ENST00000476342 IL1BP01584 269 aa30.05■■■□□ 2.4
HOXB3-208ENST00000476342 PTPN7P35236 360 aa30.05■■■□□ 2.4
HOXB3-208ENST00000476342 P2RY2P41231 377 aa30.05■■■□□ 2.4
HOXB3-208ENST00000476342 LLGL1Q15334 1064 aa30.05■■■□□ 2.4
HOXB3-208ENST00000476342 FAM46CQ5VWP2 391 aa30.05■■■□□ 2.4
HOXB3-208ENST00000476342 DPY19L3Q6ZPD9 716 aa30.05■■■□□ 2.4
HOXB3-208ENST00000476342 BBS5Q8N3I7 341 aa30.05■■■□□ 2.4
HOXB3-208ENST00000476342 HDAC11Q96DB2 347 aa30.05■■■□□ 2.4
HOXB3-208ENST00000476342 GDAP1L1Q96MZ0 367 aa30.05■■■□□ 2.4
HOXB3-208ENST00000476342 CINPQ9BW66 212 aaPredicted RBP30.05■■■□□ 2.4
HOXB3-208ENST00000476342 USP36Q9P275 1121 aaKnown RBP30.05■■■□□ 2.4
HOXB3-208ENST00000476342 PRNPP04156 253 aa30.05■■■□□ 2.4
HOXB3-208ENST00000476342 CHRNA3P32297 505 aa30.05■■■□□ 2.4
HOXB3-208ENST00000476342 PSMD8P48556 350 aa30.05■■■□□ 2.4
HOXB3-208ENST00000476342 NR2C2P49116 596 aa30.05■■■□□ 2.4
HOXB3-208ENST00000476342 CCNHP51946 323 aaPredicted RBP30.05■■■□□ 2.4
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms