RNA–Protein interactions for RNA: ENST00000476215.5

PTCD3-211, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 754 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-211ENST00000476215 EPHX3Q9H6B9 360 aa5.32□□□□□ -1.56
PTCD3-211ENST00000476215 PNRC2Q9NPJ4 139 aaKnown RBP5.32□□□□□ -1.56
PTCD3-211ENST00000476215 NLKQ9UBE8 527 aa5.32□□□□□ -1.56
PTCD3-211ENST00000476215 MST1RQ04912 1400 aa5.31□□□□□ -1.56
PTCD3-211ENST00000476215 CACNA1IQ9P0X4 2223 aa5.31□□□□□ -1.56
PTCD3-211ENST00000476215 C11orf97A0A1B0GVM6 126 aaPredicted RBP5.31□□□□□ -1.56
PTCD3-211ENST00000476215 ZNF814B7Z6K7 855 aa5.31□□□□□ -1.56
PTCD3-211ENST00000476215 GGT5P36269 586 aa5.31□□□□□ -1.56
PTCD3-211ENST00000476215 RPP30P78346 268 aaKnown RBP5.31□□□□□ -1.56
PTCD3-211ENST00000476215 G3BP1Q13283 466 aaKnown RBP eCLIP5.31□□□□□ -1.56
PTCD3-211ENST00000476215 SYTL3Q4VX76 610 aa5.31□□□□□ -1.56
PTCD3-211ENST00000476215 SLC9C2Q5TAH2 1124 aa5.31□□□□□ -1.56
PTCD3-211ENST00000476215 NAA35Q5VZE5 725 aa5.31□□□□□ -1.56
PTCD3-211ENST00000476215 MRPL10Q7Z7H8 261 aaKnown RBP5.31□□□□□ -1.56
PTCD3-211ENST00000476215 MON1AQ86VX9 555 aa5.31□□□□□ -1.56
PTCD3-211ENST00000476215 TCP11L2Q8N4U5 519 aa5.31□□□□□ -1.56
PTCD3-211ENST00000476215 ZNF366Q8N895 744 aa5.31□□□□□ -1.56
PTCD3-211ENST00000476215 LRRC57Q8N9N7 239 aa5.31□□□□□ -1.56
PTCD3-211ENST00000476215 TNIP2Q8NFZ5 429 aa5.31□□□□□ -1.56
PTCD3-211ENST00000476215 HDAC7Q8WUI4 952 aa5.31□□□□□ -1.56
PTCD3-211ENST00000476215 MSI2Q96DH6 328 aaKnown RBP5.31□□□□□ -1.56
PTCD3-211ENST00000476215 ELP4Q96EB1 424 aa5.31□□□□□ -1.56
PTCD3-211ENST00000476215 RNF125Q96EQ8 232 aa5.31□□□□□ -1.56
PTCD3-211ENST00000476215 RRP36Q96EU6 259 aaKnown RBP5.31□□□□□ -1.56
PTCD3-211ENST00000476215 APOPT1Q96IL0 206 aa5.31□□□□□ -1.56
PTCD3-211ENST00000476215 PPM1MQ96MI6 270 aa5.31□□□□□ -1.56
PTCD3-211ENST00000476215 ZNF48Q96MX3 618 aaPredicted RBP5.31□□□□□ -1.56
PTCD3-211ENST00000476215 TTYH1Q9H313 450 aaPredicted RBP5.31□□□□□ -1.56
PTCD3-211ENST00000476215 CXorf56Q9H5V9 222 aa5.31□□□□□ -1.56
PTCD3-211ENST00000476215 ENTPD7Q9NQZ7 604 aa5.31□□□□□ -1.56
PTCD3-211ENST00000476215 RNF146Q9NTX7 359 aa5.31□□□□□ -1.56
PTCD3-211ENST00000476215 ZDHHC7Q9NXF8 308 aa5.31□□□□□ -1.56
PTCD3-211ENST00000476215 GRHL1Q9NZI5 618 aa5.31□□□□□ -1.56
PTCD3-211ENST00000476215 PLEKHB1Q9UF11 243 aaPredicted RBP5.31□□□□□ -1.56
PTCD3-211ENST00000476215 ANAPC4Q9UJX5 808 aa5.31□□□□□ -1.56
PTCD3-211ENST00000476215 CNPY2Q9Y2B0 182 aa5.31□□□□□ -1.56
PTCD3-211ENST00000476215 RAP2CQ9Y3L5 183 aa5.31□□□□□ -1.56
PTCD3-211ENST00000476215 HS3ST3B1Q9Y662 390 aa5.31□□□□□ -1.56
PTCD3-211ENST00000476215 TNPO2O14787 897 aaKnown RBP5.3□□□□□ -1.56
PTCD3-211ENST00000476215 CEP104O60308 925 aa5.3□□□□□ -1.56
PTCD3-211ENST00000476215 ZC3H11AO75152 810 aaKnown RBP eCLIP5.3□□□□□ -1.56
PTCD3-211ENST00000476215 ADAP00813 363 aa5.3□□□□□ -1.56
PTCD3-211ENST00000476215 ME1P48163 572 aa5.3□□□□□ -1.56
PTCD3-211ENST00000476215 PLCD1P51178 756 aa5.3□□□□□ -1.56
PTCD3-211ENST00000476215 CLCNKBP51801 687 aa5.3□□□□□ -1.56
PTCD3-211ENST00000476215 CDH15P55291 814 aa5.3□□□□□ -1.56
PTCD3-211ENST00000476215 TMPRSS3P57727 454 aa5.3□□□□□ -1.56
PTCD3-211ENST00000476215 TBX2Q13207 712 aaPredicted RBP5.3□□□□□ -1.56
PTCD3-211ENST00000476215 RPE65Q16518 533 aa5.3□□□□□ -1.56
PTCD3-211ENST00000476215 PIP4P1Q86T03 277 aa5.3□□□□□ -1.56
PTCD3-211ENST00000476215 FAM217AQ8IXS0 508 aa5.3□□□□□ -1.56
PTCD3-211ENST00000476215 ARFGAP1Q8N6T3 406 aa5.3□□□□□ -1.56
PTCD3-211ENST00000476215 NOC3LQ8WTT2 800 aaKnown RBP5.3□□□□□ -1.56
PTCD3-211ENST00000476215 FUZQ9BT04 418 aa5.3□□□□□ -1.56
PTCD3-211ENST00000476215 PAIP1Q9H074 479 aaKnown RBP5.3□□□□□ -1.56
PTCD3-211ENST00000476215 ATP8A2Q9NTI2 1148 aa5.3□□□□□ -1.56
PTCD3-211ENST00000476215 DECR2Q9NUI1 292 aa5.3□□□□□ -1.56
PTCD3-211ENST00000476215 FBXO40Q9UH90 709 aa5.3□□□□□ -1.56
PTCD3-211ENST00000476215 PCDHA12Q9UN75 941 aa5.3□□□□□ -1.56
PTCD3-211ENST00000476215 TMEM272A0A1B0GTI8 110 aa5.29□□□□□ -1.56
PTCD3-211ENST00000476215 DDTLA6NHG4 134 aaPredicted RBP5.29□□□□□ -1.56
PTCD3-211ENST00000476215 PPEF2O14830 753 aa5.29□□□□□ -1.56
PTCD3-211ENST00000476215 RNMTO43148 476 aaKnown RBP5.29□□□□□ -1.56
PTCD3-211ENST00000476215 ATG13O75143 517 aa5.29□□□□□ -1.56
PTCD3-211ENST00000476215 NDUFB8O95169 186 aa5.29□□□□□ -1.56
PTCD3-211ENST00000476215 SERPINC1P01008 464 aa5.29□□□□□ -1.56
PTCD3-211ENST00000476215 UNGP13051 313 aaPredicted RBP5.29□□□□□ -1.56
PTCD3-211ENST00000476215 ITGB6P18564 788 aa5.29□□□□□ -1.56
PTCD3-211ENST00000476215 DPP6P42658 865 aa5.29□□□□□ -1.56
PTCD3-211ENST00000476215 PAFAH1B1P43034 410 aa5.29□□□□□ -1.56
PTCD3-211ENST00000476215 ALDH7A1P49419 539 aaKnown RBP5.29□□□□□ -1.56
PTCD3-211ENST00000476215 NR1H2P55055 460 aa5.29□□□□□ -1.56
PTCD3-211ENST00000476215 LAMB3Q13751 1172 aa5.29□□□□□ -1.56
PTCD3-211ENST00000476215 CAMK1Q14012 370 aa5.29□□□□□ -1.56
PTCD3-211ENST00000476215 BAK1Q16611 211 aa5.29□□□□□ -1.56
PTCD3-211ENST00000476215 MANEAQ5SRI9 462 aa5.29□□□□□ -1.56
PTCD3-211ENST00000476215 ASPHD1Q5U4P2 390 aa5.29□□□□□ -1.56
PTCD3-211ENST00000476215 TBC1D9BQ66K14 1250 aa5.29□□□□□ -1.56
PTCD3-211ENST00000476215 IL20RBQ6UXL0 311 aa5.29□□□□□ -1.56
PTCD3-211ENST00000476215 GPSM1Q86YR5 675 aa5.29□□□□□ -1.56
PTCD3-211ENST00000476215 CPXM2Q8N436 756 aa5.29□□□□□ -1.56
PTCD3-211ENST00000476215 ZNF548Q8NEK5 533 aaPredicted RBP5.29□□□□□ -1.56
PTCD3-211ENST00000476215 MPLKIPQ8TAP9 179 aa5.29□□□□□ -1.56
PTCD3-211ENST00000476215 TBC1D22AQ8WUA7 517 aa5.29□□□□□ -1.56
PTCD3-211ENST00000476215 TMEM174Q8WUU8 243 aa5.29□□□□□ -1.56
PTCD3-211ENST00000476215 SLC26A6Q9BXS9 759 aa5.29□□□□□ -1.56
PTCD3-211ENST00000476215 FOXP1Q9H334 677 aaPredicted RBP5.29□□□□□ -1.56
PTCD3-211ENST00000476215 TASP1Q9H6P5 420 aa5.29□□□□□ -1.56
PTCD3-211ENST00000476215 BEX4Q9NWD9 120 aaPredicted RBP5.29□□□□□ -1.56
PTCD3-211ENST00000476215 ELOVL5Q9NYP7 299 aa5.29□□□□□ -1.56
PTCD3-211ENST00000476215 CLDN16Q9Y5I7 305 aa5.29□□□□□ -1.56
PTCD3-211ENST00000476215 CYP46A1Q9Y6A2 500 aa5.29□□□□□ -1.56
PTCD3-211ENST00000476215 SLC4A4Q9Y6R1 1079 aa5.29□□□□□ -1.56
PTCD3-211ENST00000476215 GOLGA6L10A0A0M3HER8 536 aa5.28□□□□□ -1.56
PTCD3-211ENST00000476215 C17orf113A0A1B0GUU1 675 aa5.28□□□□□ -1.56
PTCD3-211ENST00000476215 TEX22C9J3V5 150 aa5.28□□□□□ -1.56
PTCD3-211ENST00000476215 J3KRW8 73 aa5.28□□□□□ -1.56
PTCD3-211ENST00000476215 TSPAN4O14817 238 aa5.28□□□□□ -1.56
PTCD3-211ENST00000476215 KCNAB3O43448 404 aa5.28□□□□□ -1.56
PTCD3-211ENST00000476215 KIF1CO43896 1103 aaKnown RBP5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms