RNA–Protein interactions for RNA: ENST00000475558.5

SHQ1-207, Transcript of SHQ1, H/ACA ribonucleoprotein assembly factor, humanhuman

TSL 5

Gene SHQ1, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHQ1-207ENST00000475558 CCNYQ8ND76 341 aa7.18□□□□□ -1.26
SHQ1-207ENST00000475558 HTR3CQ8WXA8 447 aa7.18□□□□□ -1.26
SHQ1-207ENST00000475558 CASKIN2Q8WXE0 1202 aa7.18□□□□□ -1.26
SHQ1-207ENST00000475558 IFT81Q8WYA0 676 aa7.18□□□□□ -1.26
SHQ1-207ENST00000475558 ANKRD7Q92527 254 aa7.18□□□□□ -1.26
SHQ1-207ENST00000475558 IRF7Q92985 503 aa7.18□□□□□ -1.26
SHQ1-207ENST00000475558 ART4Q93070 314 aa7.18□□□□□ -1.26
SHQ1-207ENST00000475558 EXOC4Q96A65 974 aa7.18□□□□□ -1.26
SHQ1-207ENST00000475558 HDAC11Q96DB2 347 aa7.18□□□□□ -1.26
SHQ1-207ENST00000475558 RPRD1AQ96P16 312 aaPredicted RBP7.18□□□□□ -1.26
SHQ1-207ENST00000475558 PRMT1Q99873 361 aaKnown RBP7.18□□□□□ -1.26
SHQ1-207ENST00000475558 TRMT61BQ9BVS5 477 aaKnown RBP7.18□□□□□ -1.26
SHQ1-207ENST00000475558 SLC2A11Q9BYW1 496 aa7.18□□□□□ -1.26
SHQ1-207ENST00000475558 PLA2G2FQ9BZM2 168 aa7.18□□□□□ -1.26
SHQ1-207ENST00000475558 KLC2Q9H0B6 622 aa7.18□□□□□ -1.26
SHQ1-207ENST00000475558 RNF38Q9H0F5 515 aa7.18□□□□□ -1.26
SHQ1-207ENST00000475558 BRD9Q9H8M2 597 aa7.18□□□□□ -1.26
SHQ1-207ENST00000475558 VIPAS39Q9H9C1 493 aa7.18□□□□□ -1.26
SHQ1-207ENST00000475558 LMAN1LQ9HAT1 526 aa7.18□□□□□ -1.26
SHQ1-207ENST00000475558 ZFP14Q9HCL3 533 aa7.18□□□□□ -1.26
SHQ1-207ENST00000475558 TRPV5Q9NQA5 729 aa7.18□□□□□ -1.26
SHQ1-207ENST00000475558 SEMA4GQ9NTN9 838 aa7.18□□□□□ -1.26
SHQ1-207ENST00000475558 TDP1Q9NUW8 608 aa7.18□□□□□ -1.26
SHQ1-207ENST00000475558 DTLQ9NZJ0 730 aa7.18□□□□□ -1.26
SHQ1-207ENST00000475558 ASIC3Q9UHC3 531 aa7.18□□□□□ -1.26
SHQ1-207ENST00000475558 DMGDHQ9UI17 866 aaKnown RBP7.18□□□□□ -1.26
SHQ1-207ENST00000475558 AAR2Q9Y312 384 aaKnown RBP7.18□□□□□ -1.26
SHQ1-207ENST00000475558 NEU2Q9Y3R4 380 aa7.18□□□□□ -1.26
SHQ1-207ENST00000475558 HS3ST4Q9Y661 456 aa7.18□□□□□ -1.26
SHQ1-207ENST00000475558 DYNC1LI1Q9Y6G9 523 aaKnown RBP7.18□□□□□ -1.26
SHQ1-207ENST00000475558 COL4A3Q01955 1670 aa7.18□□□□□ -1.26
SHQ1-207ENST00000475558 CHD6Q8TD26 2715 aa7.18□□□□□ -1.26
SHQ1-207ENST00000475558 VWA8A3KMH1 1905 aa7.17□□□□□ -1.26
SHQ1-207ENST00000475558 A0A0A0MRY4 1105 aa7.17□□□□□ -1.26
SHQ1-207ENST00000475558 A0A1B0GVM2 712 aa7.17□□□□□ -1.26
SHQ1-207ENST00000475558 A0A1W2PRU2 124 aa7.17□□□□□ -1.26
SHQ1-207ENST00000475558 TCRBV7S2A1N4TA0A589 114 aa7.17□□□□□ -1.26
SHQ1-207ENST00000475558 TCAF2A6NFQ2 919 aa7.17□□□□□ -1.26
SHQ1-207ENST00000475558 SHISA7A6NL88 538 aa7.17□□□□□ -1.26
SHQ1-207ENST00000475558 CHADO15335 359 aa7.17□□□□□ -1.26
SHQ1-207ENST00000475558 KCNN4O15554 427 aa7.17□□□□□ -1.26
SHQ1-207ENST00000475558 TIMM44O43615 452 aa7.17□□□□□ -1.26
SHQ1-207ENST00000475558 RAMP2O60895 175 aa7.17□□□□□ -1.26
SHQ1-207ENST00000475558 MOCS2O96007 188 aaPredicted RBP7.17□□□□□ -1.26
SHQ1-207ENST00000475558 IFNB1P01574 187 aa7.17□□□□□ -1.26
SHQ1-207ENST00000475558 H2AFXP16104 143 aaPredicted RBP7.17□□□□□ -1.26
SHQ1-207ENST00000475558 TSHRP16473 764 aa7.17□□□□□ -1.26
SHQ1-207ENST00000475558 OR1E1P30953 314 aa7.17□□□□□ -1.26
SHQ1-207ENST00000475558 CORO1AP31146 461 aaKnown RBP7.17□□□□□ -1.26
SHQ1-207ENST00000475558 HSPA9P38646 679 aaKnown RBP7.17□□□□□ -1.26
SHQ1-207ENST00000475558 GARSP41250 739 aaKnown RBP7.17□□□□□ -1.26
SHQ1-207ENST00000475558 TNNT3P45378 269 aaPredicted RBP7.17□□□□□ -1.26
SHQ1-207ENST00000475558 KCNJ1P48048 391 aa7.17□□□□□ -1.26
SHQ1-207ENST00000475558 IFNAR2P48551 515 aa7.17□□□□□ -1.26
SHQ1-207ENST00000475558 PITX1P78337 314 aaPredicted RBP7.17□□□□□ -1.26
SHQ1-207ENST00000475558 SLC7A5Q01650 507 aa7.17□□□□□ -1.26
SHQ1-207ENST00000475558 TNK2Q07912 1038 aa7.17□□□□□ -1.26
SHQ1-207ENST00000475558 DMWDQ09019 674 aa7.17□□□□□ -1.26
SHQ1-207ENST00000475558 GALNT2Q10471 571 aa7.17□□□□□ -1.26
SHQ1-207ENST00000475558 NR1H3Q13133 447 aa7.17□□□□□ -1.26
SHQ1-207ENST00000475558 LAMB3Q13751 1172 aa7.17□□□□□ -1.26
SHQ1-207ENST00000475558 DMC1Q14565 340 aa7.17□□□□□ -1.26
SHQ1-207ENST00000475558 POLD3Q15054 466 aaPredicted RBP7.17□□□□□ -1.26
SHQ1-207ENST00000475558 LPAL2Q16609 132 aa7.17□□□□□ -1.26
SHQ1-207ENST00000475558 TEX44Q53QW1 395 aa7.17□□□□□ -1.26
SHQ1-207ENST00000475558 RALGPS1Q5JS13 557 aa7.17□□□□□ -1.26
SHQ1-207ENST00000475558 NCBP2-AS2Q69YL0 99 aa7.17□□□□□ -1.26
SHQ1-207ENST00000475558 TXNDC8Q6A555 127 aa7.17□□□□□ -1.26
SHQ1-207ENST00000475558 IL31Q6EBC2 164 aa7.17□□□□□ -1.26
SHQ1-207ENST00000475558 LIAT1Q6ZQX7 453 aa7.17□□□□□ -1.26
SHQ1-207ENST00000475558 PRR23CQ6ZRP0 262 aa7.17□□□□□ -1.26
SHQ1-207ENST00000475558 ARHGEF18Q6ZSZ5 1173 aa7.17□□□□□ -1.26
SHQ1-207ENST00000475558 TMEM150AQ86TG1 271 aa7.17□□□□□ -1.26
SHQ1-207ENST00000475558 LINC00523Q86TU6 105 aa7.17□□□□□ -1.26
SHQ1-207ENST00000475558 ZC3H18Q86VM9 953 aaKnown RBP7.17□□□□□ -1.26
SHQ1-207ENST00000475558 RELL1Q8IUW5 271 aa7.17□□□□□ -1.26
SHQ1-207ENST00000475558 DENND1CQ8IV53 801 aa7.17□□□□□ -1.26
SHQ1-207ENST00000475558 FAM217AQ8IXS0 508 aa7.17□□□□□ -1.26
SHQ1-207ENST00000475558 PPIL6Q8IXY8 311 aa7.17□□□□□ -1.26
SHQ1-207ENST00000475558 CCDC13Q8IYE1 715 aa7.17□□□□□ -1.26
SHQ1-207ENST00000475558 PDIK1LQ8N165 341 aa7.17□□□□□ -1.26
SHQ1-207ENST00000475558 PYROXD2Q8N2H3 581 aa7.17□□□□□ -1.26
SHQ1-207ENST00000475558 SPEM1Q8N4L4 309 aa7.17□□□□□ -1.26
SHQ1-207ENST00000475558 GOLGA6L1Q8N7Z2 621 aa7.17□□□□□ -1.26
SHQ1-207ENST00000475558 MAB21L3Q8N8X9 362 aa7.17□□□□□ -1.26
SHQ1-207ENST00000475558 HJURPQ8NCD3 748 aaPredicted RBP7.17□□□□□ -1.26
SHQ1-207ENST00000475558 MCUQ8NE86 351 aa7.17□□□□□ -1.26
SHQ1-207ENST00000475558 DEPDC1BQ8WUY9 529 aa7.17□□□□□ -1.26
SHQ1-207ENST00000475558 FAM3CQ92520 227 aa7.17□□□□□ -1.26
SHQ1-207ENST00000475558 CAVIN3Q969G5 261 aa7.17□□□□□ -1.26
SHQ1-207ENST00000475558 ACDQ96AP0 544 aa7.17□□□□□ -1.26
SHQ1-207ENST00000475558 LRRC39Q96DD0 335 aa7.17□□□□□ -1.26
SHQ1-207ENST00000475558 SPATA13Q96N96 652 aa7.17□□□□□ -1.26
SHQ1-207ENST00000475558 TTC25Q96NG3 672 aa7.17□□□□□ -1.26
SHQ1-207ENST00000475558 OLFM3Q96PB7 478 aa7.17□□□□□ -1.26
SHQ1-207ENST00000475558 QKIQ96PU8 341 aaKnown RBP eCLIP7.17□□□□□ -1.26
SHQ1-207ENST00000475558 FMO2Q99518 471 aa7.17□□□□□ -1.26
SHQ1-207ENST00000475558 CCDC77Q9BR77 488 aa7.17□□□□□ -1.26
SHQ1-207ENST00000475558 SLC46A2Q9BY10 475 aa7.17□□□□□ -1.26
SHQ1-207ENST00000475558 PPCSQ9HAB8 311 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms