RNA–Protein interactions for RNA: ENST00000474835.5

USP16-205, Transcript of ubiquitin specific peptidase 16, humanhuman

TSL 1 (best)

Gene USP16, Length 3,835 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-205ENST00000474835 GABBR2O75899 941 aa4.17□□□□□ -1.74
USP16-205ENST00000474835 PTTG1O95997 202 aa4.17□□□□□ -1.74
USP16-205ENST00000474835 APOC2P02655 101 aa4.17□□□□□ -1.74
USP16-205ENST00000474835 HNRNPCP07910 306 aaKnown RBP eCLIP4.17□□□□□ -1.74
USP16-205ENST00000474835 CYP3A5P20815 502 aa4.17□□□□□ -1.74
USP16-205ENST00000474835 OSBPP22059 807 aa4.17□□□□□ -1.74
USP16-205ENST00000474835 GRK2P25098 689 aa4.17□□□□□ -1.74
USP16-205ENST00000474835 GMPRP36959 345 aa4.17□□□□□ -1.74
USP16-205ENST00000474835 HTR3AP46098 478 aa4.17□□□□□ -1.74
USP16-205ENST00000474835 PRKCDQ05655 676 aa4.17□□□□□ -1.74
USP16-205ENST00000474835 NFE2Q16621 373 aaPredicted RBP4.17□□□□□ -1.74
USP16-205ENST00000474835 CTU2Q2VPK5 515 aaKnown RBP4.17□□□□□ -1.74
USP16-205ENST00000474835 LETM2Q2VYF4 491 aa4.17□□□□□ -1.74
USP16-205ENST00000474835 TBC1D10BQ4KMP7 808 aaPredicted RBP4.17□□□□□ -1.74
USP16-205ENST00000474835 CATSPEREQ5SY80 951 aa4.17□□□□□ -1.74
USP16-205ENST00000474835 ATAD3BQ5T9A4 648 aa4.17□□□□□ -1.74
USP16-205ENST00000474835 UBE2UQ5VVX9 321 aa4.17□□□□□ -1.74
USP16-205ENST00000474835 TIGD3Q6B0B8 471 aa4.17□□□□□ -1.74
USP16-205ENST00000474835 UNC5AQ6ZN44 842 aa4.17□□□□□ -1.74
USP16-205ENST00000474835 DENND5BQ6ZUT9 1274 aa4.17□□□□□ -1.74
USP16-205ENST00000474835 LPCAT2Q7L5N7 544 aa4.17□□□□□ -1.74
USP16-205ENST00000474835 ZC3H7AQ8IWR0 971 aaKnown RBP4.17□□□□□ -1.74
USP16-205ENST00000474835 UNC45BQ8IWX7 931 aa4.17□□□□□ -1.74
USP16-205ENST00000474835 THNSL1Q8IYQ7 743 aa4.17□□□□□ -1.74
USP16-205ENST00000474835 PGBD3Q8N328 593 aa4.17□□□□□ -1.74
USP16-205ENST00000474835 FAM109AQ8N4B1 249 aa4.17□□□□□ -1.74
USP16-205ENST00000474835 PLD5Q8N7P1 536 aa4.17□□□□□ -1.74
USP16-205ENST00000474835 TMEM161BQ8NDZ6 487 aa4.17□□□□□ -1.74
USP16-205ENST00000474835 OR13J1Q8NGT2 312 aa4.17□□□□□ -1.74
USP16-205ENST00000474835 RDH11Q8TC12 318 aa4.17□□□□□ -1.74
USP16-205ENST00000474835 PDCD6IPQ8WUM4 868 aaKnown RBP4.17□□□□□ -1.74
USP16-205ENST00000474835 GJA10Q969M2 543 aa4.17□□□□□ -1.74
USP16-205ENST00000474835 HDAC11Q96DB2 347 aa4.17□□□□□ -1.74
USP16-205ENST00000474835 PRPF18Q99633 342 aaKnown RBP4.17□□□□□ -1.74
USP16-205ENST00000474835 EIF2AK1Q9BQI3 630 aaKnown RBP4.17□□□□□ -1.74
USP16-205ENST00000474835 C1QTNF7Q9BXJ2 289 aa4.17□□□□□ -1.74
USP16-205ENST00000474835 ADAM33Q9BZ11 813 aa4.17□□□□□ -1.74
USP16-205ENST00000474835 GLT8D2Q9H1C3 349 aa4.17□□□□□ -1.74
USP16-205ENST00000474835 ATP13A2Q9NQ11 1180 aa4.17□□□□□ -1.74
USP16-205ENST00000474835 OXSMQ9NWU1 459 aa4.17□□□□□ -1.74
USP16-205ENST00000474835 PKD2L2Q9NZM6 624 aa4.17□□□□□ -1.74
USP16-205ENST00000474835 TNFRSF10DQ9UBN6 386 aa4.17□□□□□ -1.74
USP16-205ENST00000474835 KCNN3Q9UGI6 736 aa4.17□□□□□ -1.74
USP16-205ENST00000474835 CPSF3Q9UKF6 684 aaKnown RBP4.17□□□□□ -1.74
USP16-205ENST00000474835 TLR6Q9Y2C9 796 aa4.17□□□□□ -1.74
USP16-205ENST00000474835 SSUH2Q9Y2M2 353 aa4.17□□□□□ -1.74
USP16-205ENST00000474835 ZNF541Q9H0D2 1346 aa4.17□□□□□ -1.74
USP16-205ENST00000474835 G3V3Q6 166 aa4.17□□□□□ -1.74
USP16-205ENST00000474835 MEIS1O00470 390 aa4.17□□□□□ -1.74
USP16-205ENST00000474835 TRIM38O00635 465 aa4.17□□□□□ -1.74
USP16-205ENST00000474835 POLR1CO15160 346 aaPredicted RBP4.17□□□□□ -1.74
USP16-205ENST00000474835 SMAD6O43541 496 aaKnown RBP4.17□□□□□ -1.74
USP16-205ENST00000474835 NDUFB5O43674 189 aa4.17□□□□□ -1.74
USP16-205ENST00000474835 BCAS1O75363 584 aaPredicted RBP4.17□□□□□ -1.74
USP16-205ENST00000474835 USP2O75604 605 aaPredicted RBP4.17□□□□□ -1.74
USP16-205ENST00000474835 UPK1BO75841 260 aa4.17□□□□□ -1.74
USP16-205ENST00000474835 MYO1DO94832 1006 aa4.17□□□□□ -1.74
USP16-205ENST00000474835 ZBTB7AO95365 584 aa4.17□□□□□ -1.74
USP16-205ENST00000474835 MATN4O95460 622 aa4.17□□□□□ -1.74
USP16-205ENST00000474835 SERPINE1P05121 402 aa4.17□□□□□ -1.74
USP16-205ENST00000474835 ALPLP05186 524 aa4.17□□□□□ -1.74
USP16-205ENST00000474835 GSTM1P09488 218 aa4.17□□□□□ -1.74
USP16-205ENST00000474835 OCM2P0CE71 109 aa4.17□□□□□ -1.74
USP16-205ENST00000474835 OCMP0CE72 109 aaPredicted RBP4.17□□□□□ -1.74
USP16-205ENST00000474835 EEF2P13639 858 aaKnown RBP4.17□□□□□ -1.74
USP16-205ENST00000474835 GPX3P22352 226 aa4.17□□□□□ -1.74
USP16-205ENST00000474835 CA4P22748 312 aa4.17□□□□□ -1.74
USP16-205ENST00000474835 PIK3R1P27986 724 aa4.17□□□□□ -1.74
USP16-205ENST00000474835 SHMT2P34897 504 aa4.17□□□□□ -1.74
USP16-205ENST00000474835 RYKP34925 604 aa4.17□□□□□ -1.74
USP16-205ENST00000474835 MAGEA2P43356 314 aa4.17□□□□□ -1.74
USP16-205ENST00000474835 PLA2G16P53816 162 aa4.17□□□□□ -1.74
USP16-205ENST00000474835 ISL1P61371 349 aa4.17□□□□□ -1.74
USP16-205ENST00000474835 NFKB2Q00653 900 aa4.17□□□□□ -1.74
USP16-205ENST00000474835 FOXM1Q08050 763 aa4.17□□□□□ -1.74
USP16-205ENST00000474835 FSTL1Q12841 308 aa4.17□□□□□ -1.74
USP16-205ENST00000474835 CALCOCO2Q13137 446 aa4.17□□□□□ -1.74
USP16-205ENST00000474835 NR1D2Q14995 579 aa4.17□□□□□ -1.74
USP16-205ENST00000474835 ZNF181Q2M3W8 571 aa4.17□□□□□ -1.74
USP16-205ENST00000474835 ADPRMQ3LIE5 342 aa4.17□□□□□ -1.74
USP16-205ENST00000474835 COLEC12Q5KU26 742 aa4.17□□□□□ -1.74
USP16-205ENST00000474835 KRT79Q5XKE5 535 aa4.17□□□□□ -1.74
USP16-205ENST00000474835 IQSEC1Q6DN90 963 aa4.17□□□□□ -1.74
USP16-205ENST00000474835 TBPL2Q6SJ96 375 aa4.17□□□□□ -1.74
USP16-205ENST00000474835 CCDC149Q6ZUS6 474 aa4.17□□□□□ -1.74
USP16-205ENST00000474835 CCDC190Q86UF4 302 aa4.17□□□□□ -1.74
USP16-205ENST00000474835 TXNRD3Q86VQ6 643 aa4.17□□□□□ -1.74
USP16-205ENST00000474835 CCDC60Q8IWA6 550 aaPredicted RBP4.17□□□□□ -1.74
USP16-205ENST00000474835 SEPT12Q8IYM1 358 aa4.17□□□□□ -1.74
USP16-205ENST00000474835 TCTE3Q8IZS6 198 aa4.17□□□□□ -1.74
USP16-205ENST00000474835 NLGN4XQ8N0W4 816 aa4.17□□□□□ -1.74
USP16-205ENST00000474835 SLC25A41Q8N5S1 370 aa4.17□□□□□ -1.74
USP16-205ENST00000474835 TNIP2Q8NFZ5 429 aa4.17□□□□□ -1.74
USP16-205ENST00000474835 TADA1Q96BN2 335 aa4.17□□□□□ -1.74
USP16-205ENST00000474835 TAMM41Q96BW9 452 aa4.17□□□□□ -1.74
USP16-205ENST00000474835 CMTM5Q96DZ9 223 aa4.17□□□□□ -1.74
USP16-205ENST00000474835 RIPOR3Q96MK2 946 aa4.17□□□□□ -1.74
USP16-205ENST00000474835 WDFY2Q96P53 400 aa4.17□□□□□ -1.74
USP16-205ENST00000474835 LENG8Q96PV6 779 aaPredicted RBP4.17□□□□□ -1.74
USP16-205ENST00000474835 FAM111AQ96PZ2 611 aa4.17□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms