RNA–Protein interactions for RNA: ENST00000474246.1

SMARCE1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-208ENST00000474246 GARSP41250 739 aaKnown RBP6.21□□□□□ -1.42
SMARCE1-208ENST00000474246 CLCNKAP51800 687 aa6.21□□□□□ -1.42
SMARCE1-208ENST00000474246 MLLT6P55198 1093 aaPredicted RBP6.21□□□□□ -1.42
SMARCE1-208ENST00000474246 CORO7P57737 925 aa6.21□□□□□ -1.42
SMARCE1-208ENST00000474246 ERVFC1P60507 584 aa6.21□□□□□ -1.42
SMARCE1-208ENST00000474246 PDE1BQ01064 536 aa6.21□□□□□ -1.42
SMARCE1-208ENST00000474246 GCNT1Q02742 428 aa6.21□□□□□ -1.42
SMARCE1-208ENST00000474246 UBE3AQ05086 875 aa6.21□□□□□ -1.42
SMARCE1-208ENST00000474246 CDC20Q12834 499 aa6.21□□□□□ -1.42
SMARCE1-208ENST00000474246 CALCOCO2Q13137 446 aa6.21□□□□□ -1.42
SMARCE1-208ENST00000474246 TYSND1Q2T9J0 566 aa6.21□□□□□ -1.42
SMARCE1-208ENST00000474246 KRTAP21-3Q3LHN1 58 aa6.21□□□□□ -1.42
SMARCE1-208ENST00000474246 DUSP28Q4G0W2 176 aa6.21□□□□□ -1.42
SMARCE1-208ENST00000474246 EXOSC6Q5RKV6 272 aaKnown RBP6.21□□□□□ -1.42
SMARCE1-208ENST00000474246 KLHDC7AQ5VTJ3 777 aa6.21□□□□□ -1.42
SMARCE1-208ENST00000474246 SULT6B1Q6IMI4 303 aa6.21□□□□□ -1.42
SMARCE1-208ENST00000474246 FAM171BQ6P995 826 aa6.21□□□□□ -1.42
SMARCE1-208ENST00000474246 BLOC1S2Q6QNY1 142 aa6.21□□□□□ -1.42
SMARCE1-208ENST00000474246 SLC36A4Q6YBV0 504 aa6.21□□□□□ -1.42
SMARCE1-208ENST00000474246 OTOAQ7RTW8 1153 aa6.21□□□□□ -1.42
SMARCE1-208ENST00000474246 DSG4Q86SJ6 1040 aa6.21□□□□□ -1.42
SMARCE1-208ENST00000474246 KBTBD6Q86V97 674 aa6.21□□□□□ -1.42
SMARCE1-208ENST00000474246 FBXL6Q8N531 539 aa6.21□□□□□ -1.42
SMARCE1-208ENST00000474246 SCAIQ8N9R8 606 aa6.21□□□□□ -1.42
SMARCE1-208ENST00000474246 BBS1Q8NFJ9 593 aa6.21□□□□□ -1.42
SMARCE1-208ENST00000474246 PHF21BQ96EK2 531 aa6.21□□□□□ -1.42
SMARCE1-208ENST00000474246 PLIN2Q99541 437 aa6.21□□□□□ -1.42
SMARCE1-208ENST00000474246 ZFYVE21Q9BQ24 234 aa6.21□□□□□ -1.42
SMARCE1-208ENST00000474246 ITPAQ9BY32 194 aa6.21□□□□□ -1.42
SMARCE1-208ENST00000474246 IFIH1Q9BYX4 1025 aaKnown RBP6.21□□□□□ -1.42
SMARCE1-208ENST00000474246 GPR61Q9BZJ8 451 aa6.21□□□□□ -1.42
SMARCE1-208ENST00000474246 TSPAN10Q9H1Z9 355 aaPredicted RBP6.21□□□□□ -1.42
SMARCE1-208ENST00000474246 ZSCAN16Q9H4T2 348 aaPredicted RBP6.21□□□□□ -1.42
SMARCE1-208ENST00000474246 APPL1Q9UKG1 709 aa6.21□□□□□ -1.42
SMARCE1-208ENST00000474246 CAPN11Q9UMQ6 739 aa6.21□□□□□ -1.42
SMARCE1-208ENST00000474246 PIAS3Q9Y6X2 628 aa6.21□□□□□ -1.42
SMARCE1-208ENST00000474246 FLT4P35916 1363 aa6.21□□□□□ -1.42
SMARCE1-208ENST00000474246 A0A087WUV0 522 aaPredicted RBP6.2□□□□□ -1.42
SMARCE1-208ENST00000474246 A0A0A6YYJ9 748 aa6.2□□□□□ -1.42
SMARCE1-208ENST00000474246 POM121BA6NF01 834 aa6.2□□□□□ -1.42
SMARCE1-208ENST00000474246 ZNF891A8MT65 544 aaPredicted RBP6.2□□□□□ -1.42
SMARCE1-208ENST00000474246 KPNA7A9QM74 516 aa6.2□□□□□ -1.42
SMARCE1-208ENST00000474246 SPECC1L-ADORA2AF8WAN1 911 aa6.2□□□□□ -1.42
SMARCE1-208ENST00000474246 SLCO1B7G3V0H7 640 aa6.2□□□□□ -1.42
SMARCE1-208ENST00000474246 H0Y858 1186 aa6.2□□□□□ -1.42
SMARCE1-208ENST00000474246 H0Y8G0 127 aa6.2□□□□□ -1.42
SMARCE1-208ENST00000474246 CTAG2O75638 210 aa6.2□□□□□ -1.42
SMARCE1-208ENST00000474246 UBXN7O94888 489 aa6.2□□□□□ -1.42
SMARCE1-208ENST00000474246 CSF2P04141 144 aa6.2□□□□□ -1.42
SMARCE1-208ENST00000474246 FHP07954 510 aa6.2□□□□□ -1.42
SMARCE1-208ENST00000474246 KRT7P08729 469 aa6.2□□□□□ -1.42
SMARCE1-208ENST00000474246 ODC1P11926 461 aa6.2□□□□□ -1.42
SMARCE1-208ENST00000474246 HOXD8P13378 290 aaPredicted RBP6.2□□□□□ -1.42
SMARCE1-208ENST00000474246 APEHP13798 732 aaKnown RBP6.2□□□□□ -1.42
SMARCE1-208ENST00000474246 CPN2P22792 545 aa6.2□□□□□ -1.42
SMARCE1-208ENST00000474246 CRKLP46109 303 aaKnown RBP6.2□□□□□ -1.42
SMARCE1-208ENST00000474246 ADCY7P51828 1080 aa6.2□□□□□ -1.42
SMARCE1-208ENST00000474246 METAP1P53582 386 aa6.2□□□□□ -1.42
SMARCE1-208ENST00000474246 CASP9P55211 416 aa6.2□□□□□ -1.42
SMARCE1-208ENST00000474246 ST5P78524 1137 aa6.2□□□□□ -1.42
SMARCE1-208ENST00000474246 LMAN2Q12907 356 aa6.2□□□□□ -1.42
SMARCE1-208ENST00000474246 TRA2AQ13595 282 aaKnown RBP eCLIP6.2□□□□□ -1.42
SMARCE1-208ENST00000474246 CNN3Q15417 329 aaKnown RBP6.2□□□□□ -1.42
SMARCE1-208ENST00000474246 SEC23AQ15436 765 aa6.2□□□□□ -1.42
SMARCE1-208ENST00000474246 CDONQ4KMG0 1287 aa6.2□□□□□ -1.42
SMARCE1-208ENST00000474246 AARS2Q5JTZ9 985 aaKnown RBP6.2□□□□□ -1.42
SMARCE1-208ENST00000474246 RARS2Q5T160 578 aaKnown RBP6.2□□□□□ -1.42
SMARCE1-208ENST00000474246 WLSQ5T9L3 541 aa6.2□□□□□ -1.42
SMARCE1-208ENST00000474246 ARHGAP17Q68EM7 881 aa6.2□□□□□ -1.42
SMARCE1-208ENST00000474246 FOXR2Q6PJQ5 311 aa6.2□□□□□ -1.42
SMARCE1-208ENST00000474246 GK5Q6ZS86 529 aa6.2□□□□□ -1.42
SMARCE1-208ENST00000474246 HERC6Q8IVU3 1022 aa6.2□□□□□ -1.42
SMARCE1-208ENST00000474246 FAM217AQ8IXS0 508 aa6.2□□□□□ -1.42
SMARCE1-208ENST00000474246 GLB1L3Q8NCI6 653 aaPredicted RBP6.2□□□□□ -1.42
SMARCE1-208ENST00000474246 METTL6Q8TCB7 284 aa6.2□□□□□ -1.42
SMARCE1-208ENST00000474246 UBLCP1Q8WVY7 318 aaPredicted RBP6.2□□□□□ -1.42
SMARCE1-208ENST00000474246 SLC13A3Q8WWT9 602 aa6.2□□□□□ -1.42
SMARCE1-208ENST00000474246 ZBED3Q96IU2 234 aaPredicted RBP6.2□□□□□ -1.42
SMARCE1-208ENST00000474246 MYRFLQ96LU7 910 aa6.2□□□□□ -1.42
SMARCE1-208ENST00000474246 BTBD1Q9H0C5 482 aa6.2□□□□□ -1.42
SMARCE1-208ENST00000474246 SLC26A1Q9H2B4 701 aa6.2□□□□□ -1.42
SMARCE1-208ENST00000474246 IKZF4Q9H2S9 585 aa6.2□□□□□ -1.42
SMARCE1-208ENST00000474246 TREM1Q9NP99 234 aa6.2□□□□□ -1.42
SMARCE1-208ENST00000474246 TLR9Q9NR96 1032 aa6.2□□□□□ -1.42
SMARCE1-208ENST00000474246 DDX43Q9NXZ2 648 aaKnown RBP6.2□□□□□ -1.42
SMARCE1-208ENST00000474246 KCNK4Q9NYG8 393 aa6.2□□□□□ -1.42
SMARCE1-208ENST00000474246 TAB2Q9NYJ8 693 aa6.2□□□□□ -1.42
SMARCE1-208ENST00000474246 NDOR1Q9UHB4 597 aa6.2□□□□□ -1.42
SMARCE1-208ENST00000474246 LIPT1Q9Y234 373 aa6.2□□□□□ -1.42
SMARCE1-208ENST00000474246 USP16Q9Y5T5 823 aa6.2□□□□□ -1.42
SMARCE1-208ENST00000474246 SYCE3A1L190 88 aa6.2□□□□□ -1.42
SMARCE1-208ENST00000474246 GSAPA4D1B5 854 aa6.2□□□□□ -1.42
SMARCE1-208ENST00000474246 FAM187AA6NFU0 413 aa6.2□□□□□ -1.42
SMARCE1-208ENST00000474246 MFSD2BA6NFX1 497 aa6.2□□□□□ -1.42
SMARCE1-208ENST00000474246 A6NHS1 94 aa6.2□□□□□ -1.42
SMARCE1-208ENST00000474246 SYT5O00445 386 aa6.2□□□□□ -1.42
SMARCE1-208ENST00000474246 LCE2BO14633 110 aa6.2□□□□□ -1.42
SMARCE1-208ENST00000474246 CHUKO15111 745 aa6.2□□□□□ -1.42
SMARCE1-208ENST00000474246 MEFVO15553 781 aaPredicted RBP6.2□□□□□ -1.42
SMARCE1-208ENST00000474246 SMIM24O75264 130 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms