RNA–Protein interactions for RNA: ENST00000473533.6

HERC4-209, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best)

Gene HERC4, Length 3,593 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-209ENST00000473533 ZUFSPQ96AP4 578 aa6.21□□□□□ -1.41
HERC4-209ENST00000473533 OR52B2Q96RD2 323 aa6.21□□□□□ -1.41
HERC4-209ENST00000473533 TCF12Q99081 682 aa6.21□□□□□ -1.41
HERC4-209ENST00000473533 TMEM79Q9BSE2 394 aa6.21□□□□□ -1.41
HERC4-209ENST00000473533 C9orf16Q9BUW7 83 aa6.21□□□□□ -1.41
HERC4-209ENST00000473533 ANKRD60Q9BZ19 345 aa6.21□□□□□ -1.41
HERC4-209ENST00000473533 OSBPL6Q9BZF3 934 aa6.21□□□□□ -1.41
HERC4-209ENST00000473533 TMEM9Q9P0T7 183 aa6.21□□□□□ -1.41
HERC4-209ENST00000473533 UBQLN1Q9UMX0 589 aaKnown RBP6.21□□□□□ -1.41
HERC4-209ENST00000473533 ZSWIM8A7E2V4 1837 aa6.21□□□□□ -1.42
HERC4-209ENST00000473533 TYW5A2RUC4 315 aaKnown RBP6.21□□□□□ -1.42
HERC4-209ENST00000473533 AQP12BA6NM10 295 aa6.21□□□□□ -1.42
HERC4-209ENST00000473533 H3BNH8 94 aa6.21□□□□□ -1.42
HERC4-209ENST00000473533 NEMP1O14524 444 aa6.21□□□□□ -1.42
HERC4-209ENST00000473533 MFSD11O43934 449 aa6.21□□□□□ -1.42
HERC4-209ENST00000473533 PRKCGP05129 697 aa6.21□□□□□ -1.42
HERC4-209ENST00000473533 ZNF12P17014 697 aa6.21□□□□□ -1.42
HERC4-209ENST00000473533 GOT1P17174 413 aa6.21□□□□□ -1.42
HERC4-209ENST00000473533 CYP2C18P33260 490 aa6.21□□□□□ -1.42
HERC4-209ENST00000473533 RAB10P61026 200 aa6.21□□□□□ -1.42
HERC4-209ENST00000473533 SNX17Q15036 470 aa6.21□□□□□ -1.42
HERC4-209ENST00000473533 FAM83EQ2M2I3 478 aa6.21□□□□□ -1.42
HERC4-209ENST00000473533 SLC10A6Q3KNW5 377 aa6.21□□□□□ -1.42
HERC4-209ENST00000473533 ZBED5Q49AG3 693 aa6.21□□□□□ -1.42
HERC4-209ENST00000473533 ARL13AQ5H913 290 aaPredicted RBP6.21□□□□□ -1.42
HERC4-209ENST00000473533 PPM1JQ5JR12 505 aa6.21□□□□□ -1.42
HERC4-209ENST00000473533 LRRC8EQ6NSJ5 796 aa6.21□□□□□ -1.42
HERC4-209ENST00000473533 LBX2Q6XYB7 198 aa6.21□□□□□ -1.42
HERC4-209ENST00000473533 PATL1Q86TB9 770 aaKnown RBP6.21□□□□□ -1.42
HERC4-209ENST00000473533 ACOT1Q86TX2 421 aa6.21□□□□□ -1.42
HERC4-209ENST00000473533 AQP12AQ8IXF9 295 aa6.21□□□□□ -1.42
HERC4-209ENST00000473533 GALNT4Q8N4A0 578 aa6.21□□□□□ -1.42
HERC4-209ENST00000473533 TMEM102Q8N9M5 508 aaPredicted RBP6.21□□□□□ -1.42
HERC4-209ENST00000473533 PDPRQ8NCN5 879 aa6.21□□□□□ -1.42
HERC4-209ENST00000473533 HDAC11Q96DB2 347 aa6.21□□□□□ -1.42
HERC4-209ENST00000473533 TMA16Q96EY4 203 aaKnown RBP6.21□□□□□ -1.42
HERC4-209ENST00000473533 NRBF2Q96F24 287 aa6.21□□□□□ -1.42
HERC4-209ENST00000473533 MAELQ96JY0 434 aaKnown RBP6.21□□□□□ -1.42
HERC4-209ENST00000473533 CNDP2Q96KP4 475 aaKnown RBP6.21□□□□□ -1.42
HERC4-209ENST00000473533 PKP2Q99959 881 aa6.21□□□□□ -1.42
HERC4-209ENST00000473533 HOPXQ9BPY8 73 aaPredicted RBP6.21□□□□□ -1.42
HERC4-209ENST00000473533 FTHL17Q9BXU8 183 aa6.21□□□□□ -1.42
HERC4-209ENST00000473533 SENP6Q9GZR1 1112 aaPredicted RBP6.21□□□□□ -1.42
HERC4-209ENST00000473533 MTMR10Q9NXD2 777 aa6.21□□□□□ -1.42
HERC4-209ENST00000473533 CROTQ9UKG9 612 aa6.21□□□□□ -1.42
HERC4-209ENST00000473533 SLC39A10Q9ULF5 831 aa6.21□□□□□ -1.42
HERC4-209ENST00000473533 PAIP2BQ9ULR5 123 aaKnown RBP6.21□□□□□ -1.42
HERC4-209ENST00000473533 RUVBL2Q9Y230 463 aaKnown RBP6.21□□□□□ -1.42
HERC4-209ENST00000473533 SNX9Q9Y5X1 595 aa6.21□□□□□ -1.42
HERC4-209ENST00000473533 CEPT1Q9Y6K0 416 aa6.21□□□□□ -1.42
HERC4-209ENST00000473533 ASB14A6NK59 587 aa6.21□□□□□ -1.42
HERC4-209ENST00000473533 ACOT8O14734 319 aa6.21□□□□□ -1.42
HERC4-209ENST00000473533 UBDO15205 165 aa6.21□□□□□ -1.42
HERC4-209ENST00000473533 B4GALT5O43286 388 aa6.21□□□□□ -1.42
HERC4-209ENST00000473533 PYGLP06737 847 aa6.21□□□□□ -1.42
HERC4-209ENST00000473533 HNRNPCP07910 306 aaKnown RBP eCLIP6.21□□□□□ -1.422e-7■■■■□ 24.4
HERC4-209ENST00000473533 SNRPB2P08579 225 aaKnown RBP6.21□□□□□ -1.42
HERC4-209ENST00000473533 CDK4P11802 303 aa6.21□□□□□ -1.42
HERC4-209ENST00000473533 CYP3A5P20815 502 aa6.21□□□□□ -1.42
HERC4-209ENST00000473533 MPSTP25325 297 aa6.21□□□□□ -1.42
HERC4-209ENST00000473533 GRIA1P42261 906 aa6.21□□□□□ -1.42
HERC4-209ENST00000473533 NME5P56597 212 aa6.21□□□□□ -1.42
HERC4-209ENST00000473533 TPI1P60174 286 aa6.21□□□□□ -1.42
HERC4-209ENST00000473533 POU4F1Q01851 419 aa6.21□□□□□ -1.42
HERC4-209ENST00000473533 SCAPQ12770 1279 aa6.21□□□□□ -1.42
HERC4-209ENST00000473533 LAMC2Q13753 1193 aa6.21□□□□□ -1.42
HERC4-209ENST00000473533 CEACAM7Q14002 265 aa6.21□□□□□ -1.42
HERC4-209ENST00000473533 IKBKEQ14164 716 aa6.21□□□□□ -1.42
HERC4-209ENST00000473533 HSDL1Q3SXM5 330 aa6.21□□□□□ -1.42
HERC4-209ENST00000473533 MGAT5BQ3V5L5 792 aa6.21□□□□□ -1.42
HERC4-209ENST00000473533 SV2CQ496J9 727 aa6.21□□□□□ -1.42
HERC4-209ENST00000473533 PCID2Q5JVF3 399 aa6.21□□□□□ -1.42
HERC4-209ENST00000473533 GLRA4Q5JXX5 417 aa6.21□□□□□ -1.42
HERC4-209ENST00000473533 INTS11Q5TA45 600 aaKnown RBP6.21□□□□□ -1.42
HERC4-209ENST00000473533 AGAP9Q5VTM2 703 aa6.21□□□□□ -1.42
HERC4-209ENST00000473533 FKBP9P1Q75LS8 142 aa6.21□□□□□ -1.42
HERC4-209ENST00000473533 CMC1Q7Z7K0 106 aa6.21□□□□□ -1.42
HERC4-209ENST00000473533 CARM1Q86X55 608 aa6.21□□□□□ -1.42
HERC4-209ENST00000473533 DHFR2Q86XF0 187 aa6.21□□□□□ -1.42
HERC4-209ENST00000473533 HOMEZQ8IX15 550 aa6.21□□□□□ -1.42
HERC4-209ENST00000473533 ANKRD13AQ8IZ07 590 aa6.21□□□□□ -1.42
HERC4-209ENST00000473533 SIX6OS1Q8N1H7 587 aa6.21□□□□□ -1.42
HERC4-209ENST00000473533 FNDC8Q8TC99 324 aa6.21□□□□□ -1.42
HERC4-209ENST00000473533 GAB3Q8WWW8 586 aa6.21□□□□□ -1.42
HERC4-209ENST00000473533 WNT8BQ93098 351 aa6.21□□□□□ -1.42
HERC4-209ENST00000473533 BORCS5Q969J3 196 aa6.21□□□□□ -1.42
HERC4-209ENST00000473533 PPWD1Q96BP3 646 aaKnown RBP6.21□□□□□ -1.42
HERC4-209ENST00000473533 SGF29Q96ES7 293 aa6.21□□□□□ -1.42
HERC4-209ENST00000473533 PRDM12Q9H4Q4 367 aa6.21□□□□□ -1.42
HERC4-209ENST00000473533 ARMC1Q9NVT9 282 aa6.21□□□□□ -1.42
HERC4-209ENST00000473533 GID8Q9NWU2 228 aa6.21□□□□□ -1.42
HERC4-209ENST00000473533 UBAP1Q9NZ09 502 aa6.21□□□□□ -1.42
HERC4-209ENST00000473533 CAMSAP3Q9P1Y5 1249 aaPredicted RBP6.21□□□□□ -1.42
HERC4-209ENST00000473533 SEPT3Q9UH03 358 aa6.21□□□□□ -1.42
HERC4-209ENST00000473533 AKT3Q9Y243 479 aa6.21□□□□□ -1.42
HERC4-209ENST00000473533 PSAT1Q9Y617 370 aa6.21□□□□□ -1.42
HERC4-209ENST00000473533 RLFQ13129 1914 aa6.2□□□□□ -1.42
HERC4-209ENST00000473533 A0A0J9YVX5 310 aa6.2□□□□□ -1.42
HERC4-209ENST00000473533 A0A1B0GVG6 124 aa6.2□□□□□ -1.42
HERC4-209ENST00000473533 TCRBV3S1A0A5B6 114 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms