RNA–Protein interactions for RNA: ENST00000473348.5

TRAPPC12-217, Transcript of trafficking protein particle complex 12, humanhuman

TSL 5

Gene TRAPPC12, Length 491 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-217ENST00000473348 HLA-DQB2P05538 268 aa12.77□□□□□ -0.37
TRAPPC12-217ENST00000473348 SRPRAP08240 638 aaKnown RBP12.77□□□□□ -0.37
TRAPPC12-217ENST00000473348 SRCP12931 536 aa12.77□□□□□ -0.37
TRAPPC12-217ENST00000473348 CD72P21854 359 aa12.77□□□□□ -0.37
TRAPPC12-217ENST00000473348 STIP1P31948 543 aaKnown RBP12.77□□□□□ -0.37
TRAPPC12-217ENST00000473348 TNFRSF4P43489 277 aa12.77□□□□□ -0.37
TRAPPC12-217ENST00000473348 RENBPP51606 427 aa12.77□□□□□ -0.37
TRAPPC12-217ENST00000473348 NRLP54845 237 aa12.77□□□□□ -0.37
TRAPPC12-217ENST00000473348 DR1Q01658 176 aa12.77□□□□□ -0.37
TRAPPC12-217ENST00000473348 SLC20A2Q08357 652 aa12.77□□□□□ -0.37
TRAPPC12-217ENST00000473348 PTPRNQ16849 979 aa12.77□□□□□ -0.37
TRAPPC12-217ENST00000473348 INO80DQ53TQ3 878 aaPredicted RBP12.77□□□□□ -0.37
TRAPPC12-217ENST00000473348 FAM182AQ5T1J6 154 aa12.77□□□□□ -0.37
TRAPPC12-217ENST00000473348 EGFLAMQ63HQ2 1017 aa12.77□□□□□ -0.37
TRAPPC12-217ENST00000473348 ZNF852Q6ZMS4 543 aa12.77□□□□□ -0.37
TRAPPC12-217ENST00000473348 METTL3Q86U44 580 aaKnown RBP12.77□□□□□ -0.37
TRAPPC12-217ENST00000473348 BBS5Q8N3I7 341 aa12.77□□□□□ -0.37
TRAPPC12-217ENST00000473348 TEX26Q8N6G2 289 aa12.77□□□□□ -0.37
TRAPPC12-217ENST00000473348 CCDC89Q8N998 374 aa12.77□□□□□ -0.37
TRAPPC12-217ENST00000473348 NOA1Q8NC60 698 aaKnown RBP12.77□□□□□ -0.37
TRAPPC12-217ENST00000473348 CASKIN2Q8WXE0 1202 aa12.77□□□□□ -0.37
TRAPPC12-217ENST00000473348 SLCO2A1Q92959 643 aa12.77□□□□□ -0.37
TRAPPC12-217ENST00000473348 RTP4Q96DX8 246 aa12.77□□□□□ -0.37
TRAPPC12-217ENST00000473348 ZNF419Q96HQ0 510 aaPredicted RBP12.77□□□□□ -0.37
TRAPPC12-217ENST00000473348 MRGPRX3Q96LB0 322 aa12.77□□□□□ -0.37
TRAPPC12-217ENST00000473348 VAT1Q99536 393 aa12.77□□□□□ -0.37
TRAPPC12-217ENST00000473348 IL12RB2Q99665 862 aa12.77□□□□□ -0.37
TRAPPC12-217ENST00000473348 NT5MQ9NPB1 228 aa12.77□□□□□ -0.37
TRAPPC12-217ENST00000473348 RBM22Q9NW64 420 aaKnown RBP eCLIP12.77□□□□□ -0.372e-6■■■□□ 15.6
TRAPPC12-217ENST00000473348 KLHL8Q9P2G9 620 aaPredicted RBP12.77□□□□□ -0.37
TRAPPC12-217ENST00000473348 SEPT3Q9UH03 358 aa12.77□□□□□ -0.37
TRAPPC12-217ENST00000473348 AMACRQ9UHK6 382 aa12.77□□□□□ -0.37
TRAPPC12-217ENST00000473348 NDRG2Q9UN36 371 aaKnown RBP12.77□□□□□ -0.37
TRAPPC12-217ENST00000473348 FCF1Q9Y324 198 aaKnown RBP12.77□□□□□ -0.37
TRAPPC12-217ENST00000473348 TTLL3Q9Y4R7 772 aa12.77□□□□□ -0.37
TRAPPC12-217ENST00000473348 KRBA1A5PL33 1030 aa12.76□□□□□ -0.37
TRAPPC12-217ENST00000473348 ANTXRLA6NF34 631 aa12.76□□□□□ -0.37
TRAPPC12-217ENST00000473348 C5orf60A6NFR6 353 aa12.76□□□□□ -0.37
TRAPPC12-217ENST00000473348 K7EQS6 105 aa12.76□□□□□ -0.37
TRAPPC12-217ENST00000473348 SMAD6O43541 496 aaKnown RBP12.76□□□□□ -0.37
TRAPPC12-217ENST00000473348 ETS1P14921 441 aa12.76□□□□□ -0.37
TRAPPC12-217ENST00000473348 NNMTP40261 264 aa12.76□□□□□ -0.37
TRAPPC12-217ENST00000473348 PTGIRP43119 386 aa12.76□□□□□ -0.37
TRAPPC12-217ENST00000473348 VASPP50552 380 aaPredicted RBP12.76□□□□□ -0.37
TRAPPC12-217ENST00000473348 SEC13P55735 322 aa12.76□□□□□ -0.37
TRAPPC12-217ENST00000473348 RHOAP61586 193 aa12.76□□□□□ -0.37
TRAPPC12-217ENST00000473348 ST8SIA6P61647 398 aa12.76□□□□□ -0.37
TRAPPC12-217ENST00000473348 DHX34Q14147 1143 aaKnown RBP12.76□□□□□ -0.37
TRAPPC12-217ENST00000473348 ZNF234Q14588 700 aa12.76□□□□□ -0.37
TRAPPC12-217ENST00000473348 PPP1R7Q15435 360 aa12.76□□□□□ -0.37
TRAPPC12-217ENST00000473348 CYTH1Q15438 398 aa12.76□□□□□ -0.37
TRAPPC12-217ENST00000473348 KCTD19Q17RG1 926 aaPredicted RBP12.76□□□□□ -0.37
TRAPPC12-217ENST00000473348 FNDC3BQ53EP0 1204 aaKnown RBP12.76□□□□□ -0.37
TRAPPC12-217ENST00000473348 TEX44Q53QW1 395 aa12.76□□□□□ -0.37
TRAPPC12-217ENST00000473348 ANKRD20A2Q5SQ80 823 aa12.76□□□□□ -0.37
TRAPPC12-217ENST00000473348 ANKRD20A1Q5TYW2 823 aa12.76□□□□□ -0.37
TRAPPC12-217ENST00000473348 ANKRD20A3Q5VUR7 823 aa12.76□□□□□ -0.37
TRAPPC12-217ENST00000473348 C8orf74Q6P047 294 aa12.76□□□□□ -0.37
TRAPPC12-217ENST00000473348 C22orf39Q6P5X5 142 aa12.76□□□□□ -0.37
TRAPPC12-217ENST00000473348 PRUNE1Q86TP1 453 aa12.76□□□□□ -0.37
TRAPPC12-217ENST00000473348 ZNF567Q8N184 647 aa12.76□□□□□ -0.37
TRAPPC12-217ENST00000473348 SIX5Q8N196 739 aa12.76□□□□□ -0.37
TRAPPC12-217ENST00000473348 ZNF513Q8N8E2 541 aaPredicted RBP12.76□□□□□ -0.37
TRAPPC12-217ENST00000473348 GLIS1Q8NBF1 620 aa12.76□□□□□ -0.37
TRAPPC12-217ENST00000473348 TSEN2Q8NCE0 465 aaKnown RBP12.76□□□□□ -0.37
TRAPPC12-217ENST00000473348 LRRN4CLQ8ND94 238 aa12.76□□□□□ -0.37
TRAPPC12-217ENST00000473348 CCDC110Q8TBZ0 833 aa12.76□□□□□ -0.37
TRAPPC12-217ENST00000473348 MYO19Q96H55 970 aa12.76□□□□□ -0.37
TRAPPC12-217ENST00000473348 SHDQ96IW2 340 aa12.76□□□□□ -0.37
TRAPPC12-217ENST00000473348 EXOC2Q96KP1 924 aa12.76□□□□□ -0.37
TRAPPC12-217ENST00000473348 TEKT5Q96M29 485 aa12.76□□□□□ -0.37
TRAPPC12-217ENST00000473348 SPATA13Q96N96 652 aa12.76□□□□□ -0.37
TRAPPC12-217ENST00000473348 AGAP3Q96P47 875 aa12.76□□□□□ -0.37
TRAPPC12-217ENST00000473348 UHRF1Q96T88 793 aaPredicted RBP12.76□□□□□ -0.37
TRAPPC12-217ENST00000473348 PCDH9Q9HC56 1237 aa12.76□□□□□ -0.37
TRAPPC12-217ENST00000473348 ZDHHC4Q9NPG8 344 aa12.76□□□□□ -0.37
TRAPPC12-217ENST00000473348 LHX3Q9UBR4 397 aa12.76□□□□□ -0.37
TRAPPC12-217ENST00000473348 FEZ2Q9UHY8 353 aaPredicted RBP12.76□□□□□ -0.37
TRAPPC12-217ENST00000473348 SLCO3A1Q9UIG8 710 aa12.76□□□□□ -0.37
TRAPPC12-217ENST00000473348 TRHDEQ9UKU6 1024 aa12.76□□□□□ -0.37
TRAPPC12-217ENST00000473348 HCN2Q9UL51 889 aa12.76□□□□□ -0.37
TRAPPC12-217ENST00000473348 PLA2G4CQ9UP65 541 aa12.76□□□□□ -0.37
TRAPPC12-217ENST00000473348 STARD13Q9Y3M8 1113 aa12.76□□□□□ -0.37
TRAPPC12-217ENST00000473348 TRIOO75962 3097 aa12.76□□□□□ -0.37
TRAPPC12-217ENST00000473348 MUSKO15146 869 aa12.75□□□□□ -0.37
TRAPPC12-217ENST00000473348 TTI1O43156 1089 aa12.75□□□□□ -0.37
TRAPPC12-217ENST00000473348 ZBTB24O43167 697 aaPredicted RBP12.75□□□□□ -0.37
TRAPPC12-217ENST00000473348 RAD51CO43502 376 aa12.75□□□□□ -0.37
TRAPPC12-217ENST00000473348 ATP9BO43861 1147 aa12.75□□□□□ -0.37
TRAPPC12-217ENST00000473348 OPHN1O60890 802 aa12.75□□□□□ -0.37
TRAPPC12-217ENST00000473348 TECTAO75443 2155 aa12.75□□□□□ -0.37
TRAPPC12-217ENST00000473348 GCATO75600 419 aa12.75□□□□□ -0.37
TRAPPC12-217ENST00000473348 SLU7O95391 586 aaKnown RBP12.75□□□□□ -0.37
TRAPPC12-217ENST00000473348 KRT14P02533 472 aa12.75□□□□□ -0.37
TRAPPC12-217ENST00000473348 ZSCAN5DPP0CG00 497 aa12.75□□□□□ -0.37
TRAPPC12-217ENST00000473348 NFKB1P19838 968 aa12.75□□□□□ -0.37
TRAPPC12-217ENST00000473348 TIE1P35590 1138 aa12.75□□□□□ -0.37
TRAPPC12-217ENST00000473348 ACTN2P35609 894 aa12.75□□□□□ -0.37
TRAPPC12-217ENST00000473348 HSPA9P38646 679 aaKnown RBP12.75□□□□□ -0.37
TRAPPC12-217ENST00000473348 KIR2DL1P43626 348 aaPredicted RBP12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms