RNA–Protein interactions for RNA: ENST00000473345.5

MCF2L-223, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 399 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-223ENST00000473345 DNAJC28Q9NX36 388 aa9.85□□□□□ -0.83
MCF2L-223ENST00000473345 RABGEF1Q9UJ41 708 aa9.85□□□□□ -0.83
MCF2L-223ENST00000473345 ITM2BQ9Y287 266 aa9.85□□□□□ -0.83
MCF2L-223ENST00000473345 TBC1D30Q9Y2I9 924 aa9.85□□□□□ -0.83
MCF2L-223ENST00000473345 MAST4O15021 2626 aa9.85□□□□□ -0.83
MCF2L-223ENST00000473345 TDRD6O60522 2096 aaKnown RBP9.84□□□□□ -0.83
MCF2L-223ENST00000473345 KPNA3O00505 521 aaPredicted RBP9.84□□□□□ -0.83
MCF2L-223ENST00000473345 ALOX15BO15296 676 aa9.84□□□□□ -0.83
MCF2L-223ENST00000473345 NOBOXO60393 691 aa9.84□□□□□ -0.83
MCF2L-223ENST00000473345 LEFTY1O75610 366 aa9.84□□□□□ -0.83
MCF2L-223ENST00000473345 PAK4O96013 591 aaPredicted RBP9.84□□□□□ -0.83
MCF2L-223ENST00000473345 CSF2P04141 144 aa9.84□□□□□ -0.83
MCF2L-223ENST00000473345 PNMA6AP0CW24 399 aaPredicted RBP9.84□□□□□ -0.83
MCF2L-223ENST00000473345 NME1P15531 152 aaKnown RBP9.84□□□□□ -0.83
MCF2L-223ENST00000473345 WT1P19544 449 aaPredicted RBP9.84□□□□□ -0.83
MCF2L-223ENST00000473345 ITIH2P19823 946 aa9.84□□□□□ -0.83
MCF2L-223ENST00000473345 HNRNPA2B1P22626 353 aaKnown RBP9.84□□□□□ -0.83
MCF2L-223ENST00000473345 ABL2P42684 1182 aa9.84□□□□□ -0.83
MCF2L-223ENST00000473345 NUCB2P80303 420 aa9.84□□□□□ -0.83
MCF2L-223ENST00000473345 SULT2A1Q06520 285 aa9.84□□□□□ -0.83
MCF2L-223ENST00000473345 TGIF1Q15583 401 aa9.84□□□□□ -0.83
MCF2L-223ENST00000473345 DEFB133Q30KQ1 61 aa9.84□□□□□ -0.83
MCF2L-223ENST00000473345 IGF2-ASQ6U949 168 aa9.84□□□□□ -0.83
MCF2L-223ENST00000473345 OLFML1Q6UWY5 402 aa9.84□□□□□ -0.83
MCF2L-223ENST00000473345 FAM183BPQ6ZVS7 135 aa9.84□□□□□ -0.83
MCF2L-223ENST00000473345 EFL1Q7Z2Z2 1120 aaKnown RBP9.84□□□□□ -0.83
MCF2L-223ENST00000473345 B3GNT8Q7Z7M8 397 aa9.84□□□□□ -0.83
MCF2L-223ENST00000473345 PASD1Q8IV76 773 aa9.84□□□□□ -0.83
MCF2L-223ENST00000473345 SFTPA2Q8IWL1 248 aa9.84□□□□□ -0.83
MCF2L-223ENST00000473345 ATP6V0D2Q8N8Y2 350 aa9.84□□□□□ -0.83
MCF2L-223ENST00000473345 EHBP1Q8NDI1 1231 aa9.84□□□□□ -0.83
MCF2L-223ENST00000473345 MAPK15Q8TD08 544 aa9.84□□□□□ -0.83
MCF2L-223ENST00000473345 RPRD1AQ96P16 312 aaPredicted RBP9.84□□□□□ -0.83
MCF2L-223ENST00000473345 MED15Q96RN5 788 aa9.84□□□□□ -0.83
MCF2L-223ENST00000473345 MAGEB5Q9BZ81 275 aa9.84□□□□□ -0.83
MCF2L-223ENST00000473345 CLPBQ9H078 707 aa9.84□□□□□ -0.83
MCF2L-223ENST00000473345 INTS2Q9H0H0 1204 aaKnown RBP9.84□□□□□ -0.83
MCF2L-223ENST00000473345 THAP9Q9H5L6 903 aa9.84□□□□□ -0.83
MCF2L-223ENST00000473345 FAM204AQ9H8W3 233 aa9.84□□□□□ -0.83
MCF2L-223ENST00000473345 PIGVQ9NUD9 493 aa9.84□□□□□ -0.83
MCF2L-223ENST00000473345 SLTMQ9NWH9 1034 aaKnown RBP eCLIP9.84□□□□□ -0.83
MCF2L-223ENST00000473345 MPP6Q9NZW5 540 aa9.84□□□□□ -0.83
MCF2L-223ENST00000473345 VPS28Q9UK41 221 aa9.84□□□□□ -0.83
MCF2L-223ENST00000473345 TPX2Q9ULW0 747 aaKnown RBP9.84□□□□□ -0.83
MCF2L-223ENST00000473345 FADS3Q9Y5Q0 445 aa9.84□□□□□ -0.83
MCF2L-223ENST00000473345 HECTD1Q9ULT8 2610 aa9.84□□□□□ -0.83
MCF2L-223ENST00000473345 KIF26BQ2KJY2 2108 aa9.83□□□□□ -0.84
MCF2L-223ENST00000473345 COL6A6A6NMZ7 2263 aa9.83□□□□□ -0.84
MCF2L-223ENST00000473345 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP9.83□□□□□ -0.84
MCF2L-223ENST00000473345 SPTY2D1-AS1A0A0U1RR47 76 aa9.83□□□□□ -0.84
MCF2L-223ENST00000473345 CPED1A4D0V7 1026 aa9.83□□□□□ -0.84
MCF2L-223ENST00000473345 PPP1R3GB7ZBB8 358 aa9.83□□□□□ -0.84
MCF2L-223ENST00000473345 C1QTNF3-AMACRE9PGA6 284 aa9.83□□□□□ -0.84
MCF2L-223ENST00000473345 ARHGAP6O43182 974 aa9.83□□□□□ -0.84
MCF2L-223ENST00000473345 SLC28A2O43868 658 aa9.83□□□□□ -0.84
MCF2L-223ENST00000473345 GP1BAP07359 652 aa9.83□□□□□ -0.84
MCF2L-223ENST00000473345 ZNF18P17022 549 aa9.83□□□□□ -0.84
MCF2L-223ENST00000473345 ITGB6P18564 788 aa9.83□□□□□ -0.84
MCF2L-223ENST00000473345 NUDT1P36639 197 aa9.83□□□□□ -0.84
MCF2L-223ENST00000473345 KRT85P78386 507 aa9.83□□□□□ -0.84
MCF2L-223ENST00000473345 GCNT1Q02742 428 aa9.83□□□□□ -0.84
MCF2L-223ENST00000473345 SRSF1Q07955 248 aaKnown RBP eCLIP9.83□□□□□ -0.84
MCF2L-223ENST00000473345 NME3Q13232 169 aa9.83□□□□□ -0.84
MCF2L-223ENST00000473345 ZNF177Q13360 481 aaPredicted RBP9.83□□□□□ -0.84
MCF2L-223ENST00000473345 C1orf61Q13536 156 aa9.83□□□□□ -0.84
MCF2L-223ENST00000473345 STILQ15468 1287 aa9.83□□□□□ -0.84
MCF2L-223ENST00000473345 PTPN20Q4JDL3 420 aa9.83□□□□□ -0.84
MCF2L-223ENST00000473345 FAM46CQ5VWP2 391 aa9.83□□□□□ -0.84
MCF2L-223ENST00000473345 C22orf39Q6P5X5 142 aa9.83□□□□□ -0.84
MCF2L-223ENST00000473345 ERN2Q76MJ5 926 aaKnown RBP9.83□□□□□ -0.84
MCF2L-223ENST00000473345 PARS2Q7L3T8 475 aaKnown RBP9.83□□□□□ -0.84
MCF2L-223ENST00000473345 PTAR1Q7Z6K3 402 aaPredicted RBP9.83□□□□□ -0.84
MCF2L-223ENST00000473345 TRIM59Q8IWR1 403 aa9.83□□□□□ -0.84
MCF2L-223ENST00000473345 SLC35F3Q8IY50 421 aa9.83□□□□□ -0.84
MCF2L-223ENST00000473345 TMIEQ8NEW7 156 aa9.83□□□□□ -0.84
MCF2L-223ENST00000473345 STK32AQ8WU08 396 aa9.83□□□□□ -0.84
MCF2L-223ENST00000473345 CCDC47Q96A33 483 aaKnown RBP9.83□□□□□ -0.84
MCF2L-223ENST00000473345 MED8Q96G25 268 aa9.83□□□□□ -0.84
MCF2L-223ENST00000473345 HDAC8Q9BY41 377 aa9.83□□□□□ -0.84
MCF2L-223ENST00000473345 SIK2Q9H0K1 926 aa9.83□□□□□ -0.84
MCF2L-223ENST00000473345 CLMPQ9H6B4 373 aa9.83□□□□□ -0.84
MCF2L-223ENST00000473345 PLCB1Q9NQ66 1216 aa9.83□□□□□ -0.84
MCF2L-223ENST00000473345 SLC25A13Q9UJS0 675 aa9.83□□□□□ -0.84
MCF2L-223ENST00000473345 MAN1B1Q9UKM7 699 aa9.83□□□□□ -0.84
MCF2L-223ENST00000473345 BSNQ9UPA5 3926 aa9.82□□□□□ -0.84
MCF2L-223ENST00000473345 EME2A4GXA9 379 aaPredicted RBP9.82□□□□□ -0.84
MCF2L-223ENST00000473345 IGLON5A6NGN9 336 aa9.82□□□□□ -0.84
MCF2L-223ENST00000473345 MUSKO15146 869 aa9.82□□□□□ -0.84
MCF2L-223ENST00000473345 THAP12O43422 761 aa9.82□□□□□ -0.84
MCF2L-223ENST00000473345 MAGEC1O60732 1142 aa9.82□□□□□ -0.84
MCF2L-223ENST00000473345 PCDH8O95206 1070 aa9.82□□□□□ -0.84
MCF2L-223ENST00000473345 WISP1O95388 367 aa9.82□□□□□ -0.84
MCF2L-223ENST00000473345 KRT5P13647 590 aa9.82□□□□□ -0.84
MCF2L-223ENST00000473345 ADRB3P13945 408 aa9.82□□□□□ -0.84
MCF2L-223ENST00000473345 HGFP14210 728 aa9.82□□□□□ -0.84
MCF2L-223ENST00000473345 AKT2P31751 481 aa9.82□□□□□ -0.84
MCF2L-223ENST00000473345 CCR1P32246 355 aa9.82□□□□□ -0.84
MCF2L-223ENST00000473345 NNMTP40261 264 aa9.82□□□□□ -0.84
MCF2L-223ENST00000473345 ACADSBP45954 432 aa9.82□□□□□ -0.84
MCF2L-223ENST00000473345 PFN3P60673 137 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms