RNA–Protein interactions for RNA: ENST00000473214.1

RTF1-203, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene RTF1, Length 475 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-203ENST00000473214 KCNK16Q96T55 309 aa6.17□□□□□ -1.42
RTF1-203ENST00000473214 MMP19Q99542 508 aa6.17□□□□□ -1.42
RTF1-203ENST00000473214 PIP5K1AQ99755 562 aa6.17□□□□□ -1.42
RTF1-203ENST00000473214 PRRX2Q99811 253 aa6.17□□□□□ -1.42
RTF1-203ENST00000473214 SH3GL1Q99961 368 aa6.17□□□□□ -1.42
RTF1-203ENST00000473214 SYT17Q9BSW7 474 aa6.17□□□□□ -1.42
RTF1-203ENST00000473214 THUMPD2Q9BTF0 503 aaKnown RBP6.17□□□□□ -1.42
RTF1-203ENST00000473214 HEMGNQ9BXL5 484 aa6.17□□□□□ -1.42
RTF1-203ENST00000473214 ASPNQ9BXN1 380 aa6.17□□□□□ -1.42
RTF1-203ENST00000473214 WDCPQ9H6R7 721 aa6.17□□□□□ -1.42
RTF1-203ENST00000473214 SH2D4AQ9H788 454 aa6.17□□□□□ -1.42
RTF1-203ENST00000473214 MBNL1Q9NR56 388 aaKnown RBP6.17□□□□□ -1.42
RTF1-203ENST00000473214 PRSS50Q9UI38 385 aa6.17□□□□□ -1.42
RTF1-203ENST00000473214 AJAP1Q9UKB5 411 aaPredicted RBP6.17□□□□□ -1.42
RTF1-203ENST00000473214 SARDHQ9UL12 918 aa6.17□□□□□ -1.42
RTF1-203ENST00000473214 MINPP1Q9UNW1 487 aa6.17□□□□□ -1.42
RTF1-203ENST00000473214 BTBD3Q9Y2F9 522 aa6.17□□□□□ -1.42
RTF1-203ENST00000473214 ZNF281Q9Y2X9 895 aa6.17□□□□□ -1.42
RTF1-203ENST00000473214 PTRH2Q9Y3E5 179 aaKnown RBP6.17□□□□□ -1.42
RTF1-203ENST00000473214 KIF1AQ12756 1690 aa6.17□□□□□ -1.42
RTF1-203ENST00000473214 HFM1A2PYH4 1435 aa6.16□□□□□ -1.42
RTF1-203ENST00000473214 CCDC144AA2RUR9 1427 aa6.16□□□□□ -1.42
RTF1-203ENST00000473214 TRPM3Q9HCF6 1732 aaPredicted RBP6.16□□□□□ -1.42
RTF1-203ENST00000473214 COL14A1Q05707 1796 aaKnown RBP6.16□□□□□ -1.42
RTF1-203ENST00000473214 XKRY2A2RUG3 117 aa6.16□□□□□ -1.42
RTF1-203ENST00000473214 FAM171A2A8MVW0 826 aa6.16□□□□□ -1.42
RTF1-203ENST00000473214 TNFSF14O43557 240 aa6.16□□□□□ -1.42
RTF1-203ENST00000473214 RANBP6O60518 1105 aaKnown RBP6.16□□□□□ -1.42
RTF1-203ENST00000473214 RECQL5O94762 991 aaPredicted RBP6.16□□□□□ -1.42
RTF1-203ENST00000473214 PRPF6O94906 941 aaKnown RBP6.16□□□□□ -1.42
RTF1-203ENST00000473214 KCNK5O95279 499 aa6.16□□□□□ -1.42
RTF1-203ENST00000473214 SMC2O95347 1197 aa6.16□□□□□ -1.42
RTF1-203ENST00000473214 TFRCP02786 760 aaKnown RBP6.16□□□□□ -1.42
RTF1-203ENST00000473214 CYC1P08574 325 aa6.16□□□□□ -1.42
RTF1-203ENST00000473214 TXNP10599 105 aaKnown RBP6.16□□□□□ -1.42
RTF1-203ENST00000473214 KLRC1P26715 233 aa6.16□□□□□ -1.42
RTF1-203ENST00000473214 SERPINA4P29622 427 aa6.16□□□□□ -1.42
RTF1-203ENST00000473214 ICAM3P32942 547 aa6.16□□□□□ -1.42
RTF1-203ENST00000473214 AP3M2P53677 418 aa6.16□□□□□ -1.42
RTF1-203ENST00000473214 EPHB4P54760 987 aa6.16□□□□□ -1.42
RTF1-203ENST00000473214 PRAMEP78395 509 aa6.16□□□□□ -1.42
RTF1-203ENST00000473214 FAM189BP81408 668 aa6.16□□□□□ -1.42
RTF1-203ENST00000473214 CDC42EP1Q00587 391 aa6.16□□□□□ -1.42
RTF1-203ENST00000473214 TFAP4Q01664 338 aa6.16□□□□□ -1.42
RTF1-203ENST00000473214 ZP2Q05996 745 aa6.16□□□□□ -1.42
RTF1-203ENST00000473214 MGAT2Q10469 447 aa6.16□□□□□ -1.42
RTF1-203ENST00000473214 GRSF1Q12849 480 aaKnown RBP eCLIP6.16□□□□□ -1.42
RTF1-203ENST00000473214 RAB32Q13637 225 aa6.16□□□□□ -1.42
RTF1-203ENST00000473214 SNTB1Q13884 538 aaKnown RBP6.16□□□□□ -1.42
RTF1-203ENST00000473214 SQLEQ14534 574 aa6.16□□□□□ -1.42
RTF1-203ENST00000473214 DPYSL2Q16555 572 aa6.16□□□□□ -1.42
RTF1-203ENST00000473214 INSCQ1MX18 579 aa6.16□□□□□ -1.42
RTF1-203ENST00000473214 AARDQ4LEZ3 155 aa6.16□□□□□ -1.42
RTF1-203ENST00000473214 HS1BP3Q53T59 392 aa6.16□□□□□ -1.42
RTF1-203ENST00000473214 EEF1AKMT2Q5JPI9 291 aaKnown RBP6.16□□□□□ -1.42
RTF1-203ENST00000473214 CATSPEREQ5SY80 951 aa6.16□□□□□ -1.42
RTF1-203ENST00000473214 C1orf185Q5T7R7 199 aa6.16□□□□□ -1.42
RTF1-203ENST00000473214 FCRLBQ6BAA4 426 aa6.16□□□□□ -1.42
RTF1-203ENST00000473214 RINT1Q6NUQ1 792 aa6.16□□□□□ -1.42
RTF1-203ENST00000473214 MFSD7Q6UXD7 560 aa6.16□□□□□ -1.42
RTF1-203ENST00000473214 KIAA0408Q6ZU52 694 aa6.16□□□□□ -1.42
RTF1-203ENST00000473214 RSPH3Q86UC2 560 aa6.16□□□□□ -1.42
RTF1-203ENST00000473214 TLK2Q86UE8 772 aa6.16□□□□□ -1.42
RTF1-203ENST00000473214 CAND1Q86VP6 1230 aaKnown RBP6.16□□□□□ -1.42
RTF1-203ENST00000473214 CCDC28AQ8IWP9 274 aa6.16□□□□□ -1.42
RTF1-203ENST00000473214 YAF2Q8IY57 180 aa6.16□□□□□ -1.42
RTF1-203ENST00000473214 MPP5Q8N3R9 675 aa6.16□□□□□ -1.42
RTF1-203ENST00000473214 TRIML2Q8N7C3 387 aa6.16□□□□□ -1.42
RTF1-203ENST00000473214 GBP7Q8N8V2 638 aaPredicted RBP6.16□□□□□ -1.42
RTF1-203ENST00000473214 IFI44Q8TCB0 444 aa6.16□□□□□ -1.42
RTF1-203ENST00000473214 POMGNT1Q8WZA1 660 aa6.16□□□□□ -1.42
RTF1-203ENST00000473214 RSC1A1Q92681 617 aa6.16□□□□□ -1.42
RTF1-203ENST00000473214 CORO2AQ92828 525 aa6.16□□□□□ -1.42
RTF1-203ENST00000473214 LIN37Q96GY3 246 aaPredicted RBP6.16□□□□□ -1.42
RTF1-203ENST00000473214 RBM17Q96I25 401 aaKnown RBP6.16□□□□□ -1.42
RTF1-203ENST00000473214 WRNIP1Q96S55 665 aa6.16□□□□□ -1.42
RTF1-203ENST00000473214 FERMT1Q9BQL6 677 aa6.16□□□□□ -1.42
RTF1-203ENST00000473214 PHF7Q9BWX1 381 aaPredicted RBP6.16□□□□□ -1.42
RTF1-203ENST00000473214 CARD6Q9BX69 1037 aa6.16□□□□□ -1.42
RTF1-203ENST00000473214 STRA6Q9BX79 667 aa6.16□□□□□ -1.42
RTF1-203ENST00000473214 DPH1Q9BZG8 443 aa6.16□□□□□ -1.42
RTF1-203ENST00000473214 CDIP1Q9H305 208 aa6.16□□□□□ -1.42
RTF1-203ENST00000473214 RIBC2Q9H4K1 309 aa6.16□□□□□ -1.42
RTF1-203ENST00000473214 SLC32A1Q9H598 525 aa6.16□□□□□ -1.42
RTF1-203ENST00000473214 TTC12Q9H892 705 aaPredicted RBP6.16□□□□□ -1.42
RTF1-203ENST00000473214 COQ10BQ9H8M1 238 aa6.16□□□□□ -1.42
RTF1-203ENST00000473214 CHST7Q9NS84 486 aa6.16□□□□□ -1.42
RTF1-203ENST00000473214 IARS2Q9NSE4 1012 aaKnown RBP6.16□□□□□ -1.42
RTF1-203ENST00000473214 CENPMQ9NSP4 180 aa6.16□□□□□ -1.42
RTF1-203ENST00000473214 UCKL1Q9NWZ5 548 aa6.16□□□□□ -1.42
RTF1-203ENST00000473214 SIRT5Q9NXA8 310 aa6.16□□□□□ -1.42
RTF1-203ENST00000473214 GDAP2Q9NXN4 497 aa6.16□□□□□ -1.42
RTF1-203ENST00000473214 CYP39A1Q9NYL5 469 aa6.16□□□□□ -1.42
RTF1-203ENST00000473214 CNIH4Q9P003 139 aa6.16□□□□□ -1.42
RTF1-203ENST00000473214 STK39Q9UEW8 545 aa6.16□□□□□ -1.42
RTF1-203ENST00000473214 SEC63Q9UGP8 760 aaKnown RBP6.16□□□□□ -1.42
RTF1-203ENST00000473214 BAIAP2L1Q9UHR4 511 aa6.16□□□□□ -1.42
RTF1-203ENST00000473214 MID2Q9UJV3 735 aa6.16□□□□□ -1.42
RTF1-203ENST00000473214 AGO2Q9UKV8 859 aaKnown RBP6.16□□□□□ -1.42
RTF1-203ENST00000473214 AGAP1Q9UPQ3 857 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms