RNA–Protein interactions for RNA: ENST00000473066.5

MRPL55-226, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 820 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-226ENST00000473066 SLC14A1Q13336 389 aa15.92■□□□□ 0.14
MRPL55-226ENST00000473066 POLD3Q15054 466 aaPredicted RBP15.92■□□□□ 0.14
MRPL55-226ENST00000473066 SLC45A4Q5BKX6 768 aa15.92■□□□□ 0.14
MRPL55-226ENST00000473066 TBC1D3GQ6DHY5 549 aa15.92■□□□□ 0.14
MRPL55-226ENST00000473066 TBC1D3CQ6IPX1 549 aa15.92■□□□□ 0.14
MRPL55-226ENST00000473066 NLRP14Q86W24 1093 aa15.92■□□□□ 0.14
MRPL55-226ENST00000473066 TBC1D3Q8IZP1 549 aaPredicted RBP15.92■□□□□ 0.14
MRPL55-226ENST00000473066 RYBPQ8N488 228 aaPredicted RBP15.92■□□□□ 0.14
MRPL55-226ENST00000473066 RTL3Q8N8U3 475 aaKnown RBP15.92■□□□□ 0.14
MRPL55-226ENST00000473066 GRIN3AQ8TCU5 1115 aa15.92■□□□□ 0.14
MRPL55-226ENST00000473066 SYN2Q92777 582 aaPredicted RBP15.92■□□□□ 0.14
MRPL55-226ENST00000473066 ARHGEF2Q92974 986 aaKnown RBP15.92■□□□□ 0.14
MRPL55-226ENST00000473066 ACE2Q9BYF1 805 aaPredicted RBP15.92■□□□□ 0.14
MRPL55-226ENST00000473066 GAREM1Q9H706 876 aa15.92■□□□□ 0.14
MRPL55-226ENST00000473066 IL36AQ9UHA7 158 aa15.92■□□□□ 0.14
MRPL55-226ENST00000473066 PPM1HQ9ULR3 514 aa15.92■□□□□ 0.14
MRPL55-226ENST00000473066 AP4E1Q9UPM8 1137 aa15.92■□□□□ 0.14
MRPL55-226ENST00000473066 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.92■□□□□ 0.14
MRPL55-226ENST00000473066 KNL1Q8NG31 2342 aa15.92■□□□□ 0.14
MRPL55-226ENST00000473066 TRPM6Q9BX84 2022 aa15.92■□□□□ 0.14
MRPL55-226ENST00000473066 CABIN1Q9Y6J0 2220 aa15.91■□□□□ 0.14
MRPL55-226ENST00000473066 CXorf51AA0A1B0GTR3 108 aa15.91■□□□□ 0.14
MRPL55-226ENST00000473066 UPK3BL1B0FP48 263 aa15.91■□□□□ 0.14
MRPL55-226ENST00000473066 EIF3CLB5ME19 914 aaKnown RBP15.91■□□□□ 0.14
MRPL55-226ENST00000473066 UPK3BL2E5RIL1 263 aa15.91■□□□□ 0.14
MRPL55-226ENST00000473066 PLK4O00444 970 aa15.91■□□□□ 0.14
MRPL55-226ENST00000473066 PLRG1O43660 514 aaKnown RBP15.91■□□□□ 0.14
MRPL55-226ENST00000473066 PRPSAP2O60256 369 aa15.91■□□□□ 0.14
MRPL55-226ENST00000473066 TPM1P09493 284 aa15.91■□□□□ 0.14
MRPL55-226ENST00000473066 NUDT1P36639 197 aa15.91■□□□□ 0.14
MRPL55-226ENST00000473066 RACK1P63244 317 aaKnown RBP15.91■□□□□ 0.14
MRPL55-226ENST00000473066 ARF5P84085 180 aa15.91■□□□□ 0.14
MRPL55-226ENST00000473066 OGDHQ02218 1023 aa15.91■□□□□ 0.14
MRPL55-226ENST00000473066 SEMA3BQ13214 749 aa15.91■□□□□ 0.14
MRPL55-226ENST00000473066 HNRNPDQ14103 355 aaKnown RBP15.91■□□□□ 0.14
MRPL55-226ENST00000473066 N4BP2L1Q5TBK1 243 aaPredicted RBP15.91■□□□□ 0.14
MRPL55-226ENST00000473066 PRPF39Q86UA1 669 aaKnown RBP15.91■□□□□ 0.14
MRPL55-226ENST00000473066 PYROXD2Q8N2H3 581 aa15.91■□□□□ 0.14
MRPL55-226ENST00000473066 TMIEQ8NEW7 156 aa15.91■□□□□ 0.14
MRPL55-226ENST00000473066 OR2A12Q8NGT7 310 aa15.91■□□□□ 0.14
MRPL55-226ENST00000473066 C1orf216Q8TAB5 229 aa15.91■□□□□ 0.14
MRPL55-226ENST00000473066 FNIP1Q8TF40 1166 aa15.91■□□□□ 0.14
MRPL55-226ENST00000473066 EIF3CQ99613 913 aaKnown RBP15.91■□□□□ 0.14
MRPL55-226ENST00000473066 XPO4Q9C0E2 1151 aaKnown RBP15.91■□□□□ 0.14
MRPL55-226ENST00000473066 DHX35Q9H5Z1 703 aaKnown RBP15.91■□□□□ 0.14
MRPL55-226ENST00000473066 NDFIP2Q9NV92 336 aa15.91■□□□□ 0.14
MRPL55-226ENST00000473066 SARDHQ9UL12 918 aa15.91■□□□□ 0.14
MRPL55-226ENST00000473066 CAPN11Q9UMQ6 739 aa15.91■□□□□ 0.14
MRPL55-226ENST00000473066 NEU3Q9UQ49 428 aa15.91■□□□□ 0.14
MRPL55-226ENST00000473066 FCF1Q9Y324 198 aaKnown RBP15.91■□□□□ 0.14
MRPL55-226ENST00000473066 PCDHB9Q9Y5E1 797 aa15.91■□□□□ 0.14
MRPL55-226ENST00000473066 ANKRD36A6QL64 1941 aa15.9■□□□□ 0.14
MRPL55-226ENST00000473066 EEF2KO00418 725 aaKnown RBP15.9■□□□□ 0.14
MRPL55-226ENST00000473066 GIPC1O14908 333 aa15.9■□□□□ 0.14
MRPL55-226ENST00000473066 DAPK3O43293 454 aa15.9■□□□□ 0.14
MRPL55-226ENST00000473066 ZMPSTE24O75844 475 aa15.9■□□□□ 0.14
MRPL55-226ENST00000473066 CCNHP51946 323 aaPredicted RBP15.9■□□□□ 0.14
MRPL55-226ENST00000473066 METAP1P53582 386 aa15.9■□□□□ 0.14
MRPL55-226ENST00000473066 YBEYP58557 167 aaPredicted RBP15.9■□□□□ 0.14
MRPL55-226ENST00000473066 TRIM14Q14142 442 aa15.9■□□□□ 0.14
MRPL55-226ENST00000473066 NFKBIBQ15653 356 aa15.9■□□□□ 0.14
MRPL55-226ENST00000473066 SETMARQ53H47 684 aaPredicted RBP15.9■□□□□ 0.14
MRPL55-226ENST00000473066 CARD16Q5EG05 197 aa15.9■□□□□ 0.14
MRPL55-226ENST00000473066 AGBL4Q5VU57 503 aa15.9■□□□□ 0.14
MRPL55-226ENST00000473066 DPY19L3Q6ZPD9 716 aa15.9■□□□□ 0.14
MRPL55-226ENST00000473066 DNAAF5Q86Y56 855 aa15.9■□□□□ 0.14
MRPL55-226ENST00000473066 CHST14Q8NCH0 376 aa15.9■□□□□ 0.14
MRPL55-226ENST00000473066 SERAC1Q96JX3 654 aa15.9■□□□□ 0.14
MRPL55-226ENST00000473066 SLC6A18Q96N87 628 aa15.9■□□□□ 0.14
MRPL55-226ENST00000473066 HEPHQ9BQS7 1158 aa15.9■□□□□ 0.14
MRPL55-226ENST00000473066 MAGEB5Q9BZ81 275 aa15.9■□□□□ 0.14
MRPL55-226ENST00000473066 TM6SF2Q9BZW4 377 aa15.9■□□□□ 0.14
MRPL55-226ENST00000473066 ZDHHC6Q9H6R6 413 aa15.9■□□□□ 0.14
MRPL55-226ENST00000473066 PREBQ9HCU5 417 aa15.9■□□□□ 0.14
MRPL55-226ENST00000473066 TM7SF3Q9NS93 570 aa15.9■□□□□ 0.14
MRPL55-226ENST00000473066 GPATCH2LQ9NWQ4 482 aa15.9■□□□□ 0.14
MRPL55-226ENST00000473066 PCSK1NQ9UHG2 260 aa15.9■□□□□ 0.14
MRPL55-226ENST00000473066 ANKRD6Q9Y2G4 727 aa15.9■□□□□ 0.14
MRPL55-226ENST00000473066 TMEM191CA6NGB0 347 aa15.89■□□□□ 0.13
MRPL55-226ENST00000473066 BUB1O43683 1085 aa15.89■□□□□ 0.13
MRPL55-226ENST00000473066 CTSLP07711 333 aa15.89■□□□□ 0.13
MRPL55-226ENST00000473066 ZNF883P0CG24 379 aa15.89■□□□□ 0.13
MRPL55-226ENST00000473066 CCT8P50990 548 aa15.89■□□□□ 0.13
MRPL55-226ENST00000473066 NEK3P51956 506 aa15.89■□□□□ 0.13
MRPL55-226ENST00000473066 SNRPD1P62314 119 aaKnown RBP15.89■□□□□ 0.13
MRPL55-226ENST00000473066 PPP2CBP62714 309 aa15.89■□□□□ 0.13
MRPL55-226ENST00000473066 PPP2CAP67775 309 aa15.89■□□□□ 0.13
MRPL55-226ENST00000473066 HLA-BQ31612 363 aa15.89■□□□□ 0.13
MRPL55-226ENST00000473066 PARP15Q460N3 678 aa15.89■□□□□ 0.13
MRPL55-226ENST00000473066 ARSIQ5FYB1 569 aa15.89■□□□□ 0.13
MRPL55-226ENST00000473066 ARTNQ5T4W7 220 aa15.89■□□□□ 0.13
MRPL55-226ENST00000473066 NAPEPLDQ6IQ20 393 aa15.89■□□□□ 0.13
MRPL55-226ENST00000473066 LAYNQ6UX15 382 aa15.89■□□□□ 0.13
MRPL55-226ENST00000473066 NAXDQ8IW45 347 aa15.89■□□□□ 0.13
MRPL55-226ENST00000473066 CASKIN2Q8WXE0 1202 aa15.89■□□□□ 0.13
MRPL55-226ENST00000473066 FAM131CQ96AQ9 280 aa15.89■□□□□ 0.13
MRPL55-226ENST00000473066 ISG20Q96AZ6 181 aaKnown RBP15.89■□□□□ 0.13
MRPL55-226ENST00000473066 SNRNP25Q9BV90 132 aaKnown RBP15.89■□□□□ 0.13
MRPL55-226ENST00000473066 ISCUQ9H1K1 167 aa15.89■□□□□ 0.13
MRPL55-226ENST00000473066 ANGPTL2Q9UKU9 493 aa15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms