RNA–Protein interactions for RNA: ENST00000472585.1

VCL-204, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-204ENST00000472585 SEL1L3Q68CR1 1132 aa9.57□□□□□ -0.88
VCL-204ENST00000472585 GCNT7Q6ZNI0 430 aa9.57□□□□□ -0.88
VCL-204ENST00000472585 CHSY1Q86X52 802 aa9.57□□□□□ -0.88
VCL-204ENST00000472585 CCDC117Q8IWD4 279 aaPredicted RBP9.57□□□□□ -0.88
VCL-204ENST00000472585 WDTC1Q8N5D0 677 aa9.57□□□□□ -0.88
VCL-204ENST00000472585 VOPP1Q96AW1 172 aa9.57□□□□□ -0.88
VCL-204ENST00000472585 GRAMD1AQ96CP6 724 aa9.57□□□□□ -0.88
VCL-204ENST00000472585 SPATA32Q96LK8 384 aa9.57□□□□□ -0.88
VCL-204ENST00000472585 PSMB7Q99436 277 aa9.57□□□□□ -0.88
VCL-204ENST00000472585 CNTN6Q9UQ52 1028 aa9.57□□□□□ -0.88
VCL-204ENST00000472585 DMTF1Q9Y222 760 aa9.57□□□□□ -0.88
VCL-204ENST00000472585 CEP83Q9Y592 693 aa9.57□□□□□ -0.88
VCL-204ENST00000472585 NBASA2RRP1 2371 aa9.57□□□□□ -0.88
VCL-204ENST00000472585 SPTBN1Q01082 2364 aaKnown RBP9.56□□□□□ -0.88
VCL-204ENST00000472585 POM121BA6NF01 834 aa9.56□□□□□ -0.88
VCL-204ENST00000472585 NEMP2A6NFY4 417 aa9.56□□□□□ -0.88
VCL-204ENST00000472585 E5RJQ4 531 aa9.56□□□□□ -0.88
VCL-204ENST00000472585 K7ESM1 405 aa9.56□□□□□ -0.88
VCL-204ENST00000472585 RAD51BO15315 384 aa9.56□□□□□ -0.88
VCL-204ENST00000472585 SLC7A4O43246 635 aa9.56□□□□□ -0.88
VCL-204ENST00000472585 SNAP91O60641 907 aa9.56□□□□□ -0.88
VCL-204ENST00000472585 ZNF821O75541 412 aaPredicted RBP9.56□□□□□ -0.88
VCL-204ENST00000472585 CNTN5O94779 1100 aa9.56□□□□□ -0.88
VCL-204ENST00000472585 MOCS3O95396 460 aa9.56□□□□□ -0.88
VCL-204ENST00000472585 SRCP12931 536 aa9.56□□□□□ -0.88
VCL-204ENST00000472585 TBXAS1P24557 533 aaPredicted RBP9.56□□□□□ -0.88
VCL-204ENST00000472585 YWHAEP62258 255 aaKnown RBP9.56□□□□□ -0.88
VCL-204ENST00000472585 CLN3Q13286 438 aa9.56□□□□□ -0.88
VCL-204ENST00000472585 SERINC3Q13530 473 aa9.56□□□□□ -0.88
VCL-204ENST00000472585 LINC00303Q3SY05 128 aa9.56□□□□□ -0.88
VCL-204ENST00000472585 ACCSLQ4AC99 568 aa9.56□□□□□ -0.88
VCL-204ENST00000472585 COBLL1Q53SF7 1204 aa9.56□□□□□ -0.88
VCL-204ENST00000472585 RNF219Q5W0B1 726 aaPredicted RBP9.56□□□□□ -0.88
VCL-204ENST00000472585 OR6B2Q6IFH4 312 aa9.56□□□□□ -0.88
VCL-204ENST00000472585 BEND5Q7L4P6 421 aa9.56□□□□□ -0.88
VCL-204ENST00000472585 ABI3BPQ7Z7G0 1075 aa9.56□□□□□ -0.88
VCL-204ENST00000472585 TMEM110Q86TL2 294 aa9.56□□□□□ -0.88
VCL-204ENST00000472585 PPM1KQ8N3J5 372 aa9.56□□□□□ -0.88
VCL-204ENST00000472585 SH2D3CQ8N5H7 860 aa9.56□□□□□ -0.88
VCL-204ENST00000472585 CHST14Q8NCH0 376 aa9.56□□□□□ -0.88
VCL-204ENST00000472585 ANKK1Q8NFD2 765 aa9.56□□□□□ -0.88
VCL-204ENST00000472585 OR2A12Q8NGT7 310 aa9.56□□□□□ -0.88
VCL-204ENST00000472585 OR8D1Q8WZ84 308 aa9.56□□□□□ -0.88
VCL-204ENST00000472585 EXTL1Q92935 676 aa9.56□□□□□ -0.88
VCL-204ENST00000472585 FAM149B1Q96BN6 582 aa9.56□□□□□ -0.88
VCL-204ENST00000472585 ATXN7L3BQ96GX2 97 aa9.56□□□□□ -0.88
VCL-204ENST00000472585 BTN2A3PQ96KV6 586 aa9.56□□□□□ -0.88
VCL-204ENST00000472585 USP29Q9HBJ7 922 aa9.56□□□□□ -0.88
VCL-204ENST00000472585 GDPD2Q9HCC8 539 aa9.56□□□□□ -0.88
VCL-204ENST00000472585 ST7Q9NRC1 585 aa9.56□□□□□ -0.88
VCL-204ENST00000472585 GPR27Q9NS67 375 aa9.56□□□□□ -0.88
VCL-204ENST00000472585 ARMCX3Q9UH62 379 aaPredicted RBP9.56□□□□□ -0.88
VCL-204ENST00000472585 PNMA8BQ9ULN7 279 aaPredicted RBP9.56□□□□□ -0.88
VCL-204ENST00000472585 PAXBP1Q9Y5B6 917 aa9.56□□□□□ -0.88
VCL-204ENST00000472585 PCDHGA8Q9Y5G5 932 aa9.56□□□□□ -0.88
VCL-204ENST00000472585 COL27A1Q8IZC6 1860 aaPredicted RBP9.55□□□□□ -0.88
VCL-204ENST00000472585 A0A1W2PQ27 194 aa9.55□□□□□ -0.88
VCL-204ENST00000472585 A0A1W2PQ64 194 aa9.55□□□□□ -0.88
VCL-204ENST00000472585 TYW5A2RUC4 315 aaKnown RBP9.55□□□□□ -0.88
VCL-204ENST00000472585 F5H5T6 163 aa9.55□□□□□ -0.88
VCL-204ENST00000472585 SCAMP1O15126 338 aa9.55□□□□□ -0.88
VCL-204ENST00000472585 PMM2O15305 246 aa9.55□□□□□ -0.88
VCL-204ENST00000472585 SPINT1O43278 529 aa9.55□□□□□ -0.88
VCL-204ENST00000472585 BNIP3LO60238 219 aa9.55□□□□□ -0.88
VCL-204ENST00000472585 LZTS3O60299 673 aaPredicted RBP9.55□□□□□ -0.88
VCL-204ENST00000472585 PPFIA2O75334 1257 aa9.55□□□□□ -0.88
VCL-204ENST00000472585 TNFSF15O95150 251 aa9.55□□□□□ -0.88
VCL-204ENST00000472585 ITGB2P05107 769 aa9.55□□□□□ -0.88
VCL-204ENST00000472585 CENPBP07199 599 aaPredicted RBP9.55□□□□□ -0.88
VCL-204ENST00000472585 YWHAZP63104 245 aaKnown RBP9.55□□□□□ -0.88
VCL-204ENST00000472585 FKBP3Q00688 224 aaKnown RBP9.55□□□□□ -0.88
VCL-204ENST00000472585 TLE1Q04724 770 aa9.55□□□□□ -0.88
VCL-204ENST00000472585 SULT2A1Q06520 285 aa9.55□□□□□ -0.88
VCL-204ENST00000472585 SLC12A1Q13621 1099 aa9.55□□□□□ -0.88
VCL-204ENST00000472585 AUHQ13825 339 aaKnown RBP9.55□□□□□ -0.88
VCL-204ENST00000472585 FZD2Q14332 565 aa9.55□□□□□ -0.88
VCL-204ENST00000472585 DRAP1Q14919 205 aaPredicted RBP9.55□□□□□ -0.88
VCL-204ENST00000472585 TMEM259Q4ZIN3 620 aa9.55□□□□□ -0.88
VCL-204ENST00000472585 SETMARQ53H47 684 aaPredicted RBP9.55□□□□□ -0.88
VCL-204ENST00000472585 ALFQ53S48 1182 aa9.55□□□□□ -0.88
VCL-204ENST00000472585 OTUD1Q5VV17 481 aaPredicted RBP9.55□□□□□ -0.88
VCL-204ENST00000472585 Q6ZSR6 202 aa9.55□□□□□ -0.88
VCL-204ENST00000472585 HORMAD1Q86X24 394 aa9.55□□□□□ -0.88
VCL-204ENST00000472585 ZNF683Q8IZ20 524 aa9.55□□□□□ -0.88
VCL-204ENST00000472585 DEFB106AQ8N104 65 aa9.55□□□□□ -0.88
VCL-204ENST00000472585 EHBP1Q8NDI1 1231 aa9.55□□□□□ -0.88
VCL-204ENST00000472585 WDR36Q8NI36 951 aaKnown RBP9.55□□□□□ -0.88
VCL-204ENST00000472585 SPATA20Q8TB22 786 aa9.55□□□□□ -0.88
VCL-204ENST00000472585 IFI44Q8TCB0 444 aa9.55□□□□□ -0.88
VCL-204ENST00000472585 CCDC47Q96A33 483 aaKnown RBP9.55□□□□□ -0.88
VCL-204ENST00000472585 SGF29Q96ES7 293 aa9.55□□□□□ -0.88
VCL-204ENST00000472585 NT5C1BQ96P26 610 aa9.55□□□□□ -0.88
VCL-204ENST00000472585 DUSP23Q9BVJ7 150 aa9.55□□□□□ -0.88
VCL-204ENST00000472585 POPDC2Q9HBU9 364 aa9.55□□□□□ -0.88
VCL-204ENST00000472585 METTL14Q9HCE5 456 aaKnown RBP9.55□□□□□ -0.88
VCL-204ENST00000472585 PREBQ9HCU5 417 aa9.55□□□□□ -0.88
VCL-204ENST00000472585 SLTMQ9NWH9 1034 aaKnown RBP eCLIP9.55□□□□□ -0.88
VCL-204ENST00000472585 NLGN3Q9NZ94 848 aa9.55□□□□□ -0.88
VCL-204ENST00000472585 ATXN7L1Q9ULK2 861 aaPredicted RBP9.55□□□□□ -0.88
VCL-204ENST00000472585 TBC1D30Q9Y2I9 924 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms