RNA–Protein interactions for RNA: ENST00000470094.1

BRCA2-202, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 5

Gene BRCA2, Length 842 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-202ENST00000470094 YWHAQP27348 245 aa4.23□□□□□ -1.73
BRCA2-202ENST00000470094 AVPR1AP37288 418 aa4.23□□□□□ -1.73
BRCA2-202ENST00000470094 CDKN2AP42771 156 aaKnown RBP4.23□□□□□ -1.73
BRCA2-202ENST00000470094 MTNR1AP48039 350 aa4.23□□□□□ -1.73
BRCA2-202ENST00000470094 THBS3P49746 956 aa4.23□□□□□ -1.73
BRCA2-202ENST00000470094 SELENOVP59797 346 aa4.23□□□□□ -1.73
BRCA2-202ENST00000470094 PPFIA1Q13136 1202 aa4.23□□□□□ -1.73
BRCA2-202ENST00000470094 ZRSR2Q15696 482 aaKnown RBP4.23□□□□□ -1.73
BRCA2-202ENST00000470094 OTUD1Q5VV17 481 aaPredicted RBP4.23□□□□□ -1.73
BRCA2-202ENST00000470094 DCAF12L2Q5VW00 463 aa4.23□□□□□ -1.73
BRCA2-202ENST00000470094 SERPINA11Q86U17 422 aa4.23□□□□□ -1.73
BRCA2-202ENST00000470094 ZDHHC23Q8IYP9 409 aa4.23□□□□□ -1.73
BRCA2-202ENST00000470094 USP38Q8NB14 1042 aa4.23□□□□□ -1.73
BRCA2-202ENST00000470094 CEP76Q8TAP6 659 aa4.23□□□□□ -1.73
BRCA2-202ENST00000470094 EVI5LQ96CN4 794 aa4.23□□□□□ -1.73
BRCA2-202ENST00000470094 RNFT2Q96EX2 444 aa4.23□□□□□ -1.73
BRCA2-202ENST00000470094 NAF1Q96HR8 494 aaKnown RBP4.23□□□□□ -1.73
BRCA2-202ENST00000470094 LYZL4Q96KX0 146 aa4.23□□□□□ -1.73
BRCA2-202ENST00000470094 CAMK1GQ96NX5 476 aa4.23□□□□□ -1.73
BRCA2-202ENST00000470094 NPLQ9BXD5 320 aaPredicted RBP4.23□□□□□ -1.73
BRCA2-202ENST00000470094 POLDIP3Q9BY77 421 aaKnown RBP4.23□□□□□ -1.73
BRCA2-202ENST00000470094 KLHL31Q9H511 634 aa4.23□□□□□ -1.73
BRCA2-202ENST00000470094 CATSPERBQ9H7T0 1116 aa4.23□□□□□ -1.73
BRCA2-202ENST00000470094 PLAC1Q9HBJ0 212 aa4.23□□□□□ -1.73
BRCA2-202ENST00000470094 TLR8Q9NR97 1041 aaKnown RBP4.23□□□□□ -1.73
BRCA2-202ENST00000470094 HIF1ANQ9NWT6 349 aa4.23□□□□□ -1.73
BRCA2-202ENST00000470094 GRHL1Q9NZI5 618 aa4.23□□□□□ -1.73
BRCA2-202ENST00000470094 CD207Q9UJ71 328 aa4.23□□□□□ -1.73
BRCA2-202ENST00000470094 GDAQ9Y2T3 454 aa4.23□□□□□ -1.73
BRCA2-202ENST00000470094 TARSL2A2RTX5 802 aaKnown RBP4.22□□□□□ -1.73
BRCA2-202ENST00000470094 DDTLA6NHG4 134 aaPredicted RBP4.22□□□□□ -1.73
BRCA2-202ENST00000470094 PROB1E7EW31 1015 aa4.22□□□□□ -1.73
BRCA2-202ENST00000470094 IL1AP01583 271 aa4.22□□□□□ -1.73
BRCA2-202ENST00000470094 MMP3P08254 477 aa4.22□□□□□ -1.73
BRCA2-202ENST00000470094 CNPP09543 421 aaKnown RBP4.22□□□□□ -1.73
BRCA2-202ENST00000470094 WEE2P0C1S8 567 aa4.22□□□□□ -1.73
BRCA2-202ENST00000470094 ITGB6P18564 788 aa4.22□□□□□ -1.73
BRCA2-202ENST00000470094 ARRB2P32121 409 aa4.22□□□□□ -1.73
BRCA2-202ENST00000470094 RFC1P35251 1148 aaPredicted RBP4.22□□□□□ -1.73
BRCA2-202ENST00000470094 DPP6P42658 865 aa4.22□□□□□ -1.73
BRCA2-202ENST00000470094 PPP3CCP48454 512 aa4.22□□□□□ -1.73
BRCA2-202ENST00000470094 ZP1P60852 638 aa4.22□□□□□ -1.73
BRCA2-202ENST00000470094 ROR2Q01974 943 aaKnown RBP4.22□□□□□ -1.73
BRCA2-202ENST00000470094 SLC12A1Q13621 1099 aa4.22□□□□□ -1.73
BRCA2-202ENST00000470094 PKP1Q13835 747 aa4.22□□□□□ -1.73
BRCA2-202ENST00000470094 EFR3AQ14156 821 aa4.22□□□□□ -1.73
BRCA2-202ENST00000470094 DUSP6Q16828 381 aa4.22□□□□□ -1.73
BRCA2-202ENST00000470094 INO80DQ53TQ3 878 aaPredicted RBP4.22□□□□□ -1.73
BRCA2-202ENST00000470094 DNTTIP2Q5QJE6 756 aaKnown RBP4.22□□□□□ -1.73
BRCA2-202ENST00000470094 SH2D4BQ5SQS7 431 aa4.22□□□□□ -1.73
BRCA2-202ENST00000470094 TMEM71Q6P5X7 295 aa4.22□□□□□ -1.73
BRCA2-202ENST00000470094 GJB7Q6PEY0 223 aa4.22□□□□□ -1.73
BRCA2-202ENST00000470094 ANKRD18AQ8IVF6 992 aa4.22□□□□□ -1.73
BRCA2-202ENST00000470094 CADM3Q8N126 398 aa4.22□□□□□ -1.73
BRCA2-202ENST00000470094 GHDCQ8N2G8 530 aa4.22□□□□□ -1.73
BRCA2-202ENST00000470094 OIT3Q8WWZ8 545 aa4.22□□□□□ -1.73
BRCA2-202ENST00000470094 SH3KBP1Q96B97 665 aa4.22□□□□□ -1.73
BRCA2-202ENST00000470094 URB1-AS1Q96HZ7 61 aa4.22□□□□□ -1.73
BRCA2-202ENST00000470094 MARK4Q96L34 752 aa4.22□□□□□ -1.73
BRCA2-202ENST00000470094 ZSCAN31Q96LW9 406 aaPredicted RBP4.22□□□□□ -1.73
BRCA2-202ENST00000470094 SCLT1Q96NL6 688 aa4.22□□□□□ -1.73
BRCA2-202ENST00000470094 PLK2Q9NYY3 685 aa4.22□□□□□ -1.73
BRCA2-202ENST00000470094 SEL1LQ9UBV2 794 aa4.22□□□□□ -1.73
BRCA2-202ENST00000470094 CKAP5Q14008 2032 aa4.21□□□□□ -1.74
BRCA2-202ENST00000470094 IGKV2D-30A0A075B6S6 120 aa4.21□□□□□ -1.74
BRCA2-202ENST00000470094 CCDC189A1A4V9 331 aa4.21□□□□□ -1.74
BRCA2-202ENST00000470094 VWA3AA6NCI4 1184 aa4.21□□□□□ -1.74
BRCA2-202ENST00000470094 OR6C75A6NL08 312 aa4.21□□□□□ -1.74
BRCA2-202ENST00000470094 BECN2A8MW95 431 aa4.21□□□□□ -1.74
BRCA2-202ENST00000470094 MS4A18H0YCH9 400 aa4.21□□□□□ -1.74
BRCA2-202ENST00000470094 PEX12O00623 359 aa4.21□□□□□ -1.74
BRCA2-202ENST00000470094 HSPB6O14558 160 aa4.21□□□□□ -1.74
BRCA2-202ENST00000470094 IKBKBO14920 756 aa4.21□□□□□ -1.74
BRCA2-202ENST00000470094 KLK10O43240 276 aa4.21□□□□□ -1.74
BRCA2-202ENST00000470094 SMAD6O43541 496 aaKnown RBP4.21□□□□□ -1.74
BRCA2-202ENST00000470094 SPRY3O43610 288 aa4.21□□□□□ -1.74
BRCA2-202ENST00000470094 DHX16O60231 1041 aaKnown RBP4.21□□□□□ -1.74
BRCA2-202ENST00000470094 TSPAN3O60637 253 aa4.21□□□□□ -1.74
BRCA2-202ENST00000470094 T-ENOLP0DO92 83 aa4.21□□□□□ -1.74
BRCA2-202ENST00000470094 ENO3P13929 434 aaPredicted RBP4.21□□□□□ -1.74
BRCA2-202ENST00000470094 HNF1BP35680 557 aa4.21□□□□□ -1.74
BRCA2-202ENST00000470094 PTPN9P43378 593 aa4.21□□□□□ -1.74
BRCA2-202ENST00000470094 CDH12P55289 794 aa4.21□□□□□ -1.74
BRCA2-202ENST00000470094 NANOS2P60321 138 aaKnown RBP4.21□□□□□ -1.74
BRCA2-202ENST00000470094 HSP90AB4PQ58FF6 505 aa4.21□□□□□ -1.74
BRCA2-202ENST00000470094 TBC1D9BQ66K14 1250 aa4.21□□□□□ -1.74
BRCA2-202ENST00000470094 TRIM74Q86UV6 250 aa4.21□□□□□ -1.74
BRCA2-202ENST00000470094 TRIM73Q86UV7 250 aa4.21□□□□□ -1.74
BRCA2-202ENST00000470094 PALB2Q86YC2 1186 aa4.21□□□□□ -1.74
BRCA2-202ENST00000470094 TMC8Q8IU68 726 aa4.21□□□□□ -1.74
BRCA2-202ENST00000470094 FBXL14Q8N1E6 418 aa4.21□□□□□ -1.74
BRCA2-202ENST00000470094 SETD9Q8NE22 299 aa4.21□□□□□ -1.74
BRCA2-202ENST00000470094 SLC35F5Q8WV83 523 aa4.21□□□□□ -1.74
BRCA2-202ENST00000470094 THOC3Q96J01 351 aaKnown RBP4.21□□□□□ -1.74
BRCA2-202ENST00000470094 TMEM204Q9BSN7 226 aa4.21□□□□□ -1.74
BRCA2-202ENST00000470094 DCLK3Q9C098 648 aa4.21□□□□□ -1.74
BRCA2-202ENST00000470094 CXorf56Q9H5V9 222 aa4.21□□□□□ -1.74
BRCA2-202ENST00000470094 STN1Q9H668 368 aaKnown RBP4.21□□□□□ -1.74
BRCA2-202ENST00000470094 TTC12Q9H892 705 aaPredicted RBP4.21□□□□□ -1.74
BRCA2-202ENST00000470094 NOL12Q9UGY1 213 aaKnown RBP eCLIP4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms