RNA–Protein interactions for RNA: ENST00000470091.1

LINC00173-201, long intergenic non-protein coding RNA 173, humanhuman

TSL 1 (best) BASIC

Gene LINC00173, Length 435 nt, Biotype lincRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00173-201ENST00000470091 RARAP10276 462 aa13.97□□□□□ -0.17
LINC00173-201ENST00000470091 RDXP35241 583 aaKnown RBP13.97□□□□□ -0.17
LINC00173-201ENST00000470091 GRIK2Q13002 908 aa13.97□□□□□ -0.17
LINC00173-201ENST00000470091 TRIP4Q15650 581 aaPredicted RBP13.97□□□□□ -0.17
LINC00173-201ENST00000470091 TRIP6Q15654 476 aaKnown RBP13.97□□□□□ -0.17
LINC00173-201ENST00000470091 FNDC3BQ53EP0 1204 aaKnown RBP13.97□□□□□ -0.17
LINC00173-201ENST00000470091 MPPE1Q53F39 396 aa13.97□□□□□ -0.17
LINC00173-201ENST00000470091 ODF2Q5BJF6 829 aa13.97□□□□□ -0.17
LINC00173-201ENST00000470091 SPOCD1Q6ZMY3 1216 aa13.97□□□□□ -0.17
LINC00173-201ENST00000470091 STRADAQ7RTN6 431 aa13.97□□□□□ -0.17
LINC00173-201ENST00000470091 METTL3Q86U44 580 aaKnown RBP13.97□□□□□ -0.17
LINC00173-201ENST00000470091 RCOR2Q8IZ40 523 aa13.97□□□□□ -0.17
LINC00173-201ENST00000470091 CPXM2Q8N436 756 aa13.97□□□□□ -0.17
LINC00173-201ENST00000470091 PNPLA1Q8N8W4 532 aa13.97□□□□□ -0.17
LINC00173-201ENST00000470091 ADAM32Q8TC27 787 aa13.97□□□□□ -0.17
LINC00173-201ENST00000470091 UBXN4Q92575 508 aa13.97□□□□□ -0.17
LINC00173-201ENST00000470091 GATA6Q92908 595 aa13.97□□□□□ -0.17
LINC00173-201ENST00000470091 TMA16Q96EY4 203 aaKnown RBP13.97□□□□□ -0.17
LINC00173-201ENST00000470091 NAP1L3Q99457 506 aaPredicted RBP13.97□□□□□ -0.17
LINC00173-201ENST00000470091 NCAPGQ9BPX3 1015 aa13.97□□□□□ -0.17
LINC00173-201ENST00000470091 SNRNP25Q9BV90 132 aaKnown RBP13.97□□□□□ -0.17
LINC00173-201ENST00000470091 HEMGNQ9BXL5 484 aa13.97□□□□□ -0.17
LINC00173-201ENST00000470091 TMEM121BQ9BXQ6 578 aaPredicted RBP13.97□□□□□ -0.17
LINC00173-201ENST00000470091 SLC2A11Q9BYW1 496 aa13.97□□□□□ -0.17
LINC00173-201ENST00000470091 FAM204AQ9H8W3 233 aa13.97□□□□□ -0.17
LINC00173-201ENST00000470091 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.97□□□□□ -0.17
LINC00173-201ENST00000470091 DNAAF2Q9NVR5 837 aaKnown RBP13.97□□□□□ -0.17
LINC00173-201ENST00000470091 USP36Q9P275 1121 aaKnown RBP13.97□□□□□ -0.17
LINC00173-201ENST00000470091 PKD1L2Q7Z442 2459 aa13.97□□□□□ -0.17
LINC00173-201ENST00000470091 A0A1B0GTW7 788 aa13.96□□□□□ -0.17
LINC00173-201ENST00000470091 C3orf70A6NLC5 250 aaPredicted RBP13.96□□□□□ -0.17
LINC00173-201ENST00000470091 M0QYT0 321 aa13.96□□□□□ -0.17
LINC00173-201ENST00000470091 RHOXF2BP0C7M4 288 aa13.96□□□□□ -0.17
LINC00173-201ENST00000470091 OXTRP30559 389 aa13.96□□□□□ -0.17
LINC00173-201ENST00000470091 COPAP53621 1224 aa13.96□□□□□ -0.17
LINC00173-201ENST00000470091 NME3Q13232 169 aa13.96□□□□□ -0.17
LINC00173-201ENST00000470091 ENPP2Q13822 863 aa13.96□□□□□ -0.17
LINC00173-201ENST00000470091 SIX1Q15475 284 aaPredicted RBP13.96□□□□□ -0.17
LINC00173-201ENST00000470091 BNIPLQ7Z465 357 aa13.96□□□□□ -0.17
LINC00173-201ENST00000470091 TAC4Q86UU9 113 aa13.96□□□□□ -0.17
LINC00173-201ENST00000470091 FAM131BQ86XD5 332 aa13.96□□□□□ -0.17
LINC00173-201ENST00000470091 KLHL7Q8IXQ5 586 aa13.96□□□□□ -0.17
LINC00173-201ENST00000470091 MMGT1Q8N4V1 131 aa13.96□□□□□ -0.17
LINC00173-201ENST00000470091 CCDC185Q8N715 623 aa13.96□□□□□ -0.17
LINC00173-201ENST00000470091 DQX1Q8TE96 717 aaKnown RBP13.96□□□□□ -0.17
LINC00173-201ENST00000470091 DNASE2BQ8WZ79 361 aa13.96□□□□□ -0.17
LINC00173-201ENST00000470091 SNX19Q92543 992 aa13.96□□□□□ -0.17
LINC00173-201ENST00000470091 NT5C3BQ969T7 300 aa13.96□□□□□ -0.17
LINC00173-201ENST00000470091 KRT12Q99456 494 aa13.96□□□□□ -0.17
LINC00173-201ENST00000470091 RHOXF2Q9BQY4 288 aa13.96□□□□□ -0.17
LINC00173-201ENST00000470091 TRIM62Q9BVG3 475 aa13.96□□□□□ -0.17
LINC00173-201ENST00000470091 OSBPL8Q9BZF1 889 aa13.96□□□□□ -0.17
LINC00173-201ENST00000470091 IL21RQ9HBE5 538 aa13.96□□□□□ -0.17
LINC00173-201ENST00000470091 OLA1Q9NTK5 396 aaKnown RBP13.96□□□□□ -0.17
LINC00173-201ENST00000470091 ABCB8Q9NUT2 735 aa13.96□□□□□ -0.17
LINC00173-201ENST00000470091 EIF2B4Q9UI10 523 aaKnown RBP13.96□□□□□ -0.17
LINC00173-201ENST00000470091 PLA2G4CQ9UP65 541 aa13.96□□□□□ -0.17
LINC00173-201ENST00000470091 HBS1LQ9Y450 684 aaKnown RBP13.96□□□□□ -0.17
LINC00173-201ENST00000470091 NEUROG3Q9Y4Z2 214 aa13.96□□□□□ -0.17
LINC00173-201ENST00000470091 LAMA5O15230 3695 aa13.95□□□□□ -0.18
LINC00173-201ENST00000470091 hCG_1818297A0A087WSY0 165 aa13.95□□□□□ -0.18
LINC00173-201ENST00000470091 GOLGA6L10A0A0M3HER8 536 aa13.95□□□□□ -0.18
LINC00173-201ENST00000470091 GOLGA6L7A0A1B0GV03 622 aa13.95□□□□□ -0.18
LINC00173-201ENST00000470091 METTL12A8MUP2 240 aa13.95□□□□□ -0.18
LINC00173-201ENST00000470091 GJB3O75712 270 aa13.95□□□□□ -0.18
LINC00173-201ENST00000470091 CD48P09326 243 aa13.95□□□□□ -0.18
LINC00173-201ENST00000470091 KRT10P13645 584 aa13.95□□□□□ -0.18
LINC00173-201ENST00000470091 HOXD9P28356 352 aaPredicted RBP13.95□□□□□ -0.18
LINC00173-201ENST00000470091 HLA-FP30511 346 aa13.95□□□□□ -0.18
LINC00173-201ENST00000470091 PTPN7P35236 360 aa13.95□□□□□ -0.18
LINC00173-201ENST00000470091 CETN2P41208 172 aa13.95□□□□□ -0.18
LINC00173-201ENST00000470091 CDKN2BP42772 138 aa13.95□□□□□ -0.18
LINC00173-201ENST00000470091 SGSHP51688 502 aa13.95□□□□□ -0.18
LINC00173-201ENST00000470091 ARSEP51690 589 aa13.95□□□□□ -0.18
LINC00173-201ENST00000470091 CDH6P55285 790 aa13.95□□□□□ -0.18
LINC00173-201ENST00000470091 MRPS25P82663 173 aaKnown RBP13.95□□□□□ -0.18
LINC00173-201ENST00000470091 DEUP1Q05D60 604 aa13.95□□□□□ -0.18
LINC00173-201ENST00000470091 EIF4HQ15056 248 aaKnown RBP13.95□□□□□ -0.18
LINC00173-201ENST00000470091 E2F5Q15329 346 aa13.95□□□□□ -0.18
LINC00173-201ENST00000470091 PPP2R5EQ16537 467 aa13.95□□□□□ -0.18
LINC00173-201ENST00000470091 CA9Q16790 459 aa13.95□□□□□ -0.18
LINC00173-201ENST00000470091 ZC3H12AQ5D1E8 599 aaKnown RBP13.95□□□□□ -0.18
LINC00173-201ENST00000470091 ADGRF1Q5T601 910 aa13.95□□□□□ -0.18
LINC00173-201ENST00000470091 KAZNQ674X7 775 aa13.95□□□□□ -0.18
LINC00173-201ENST00000470091 RFWD3Q6PCD5 774 aa13.95□□□□□ -0.18
LINC00173-201ENST00000470091 CHST9Q7L1S5 443 aa13.95□□□□□ -0.18
LINC00173-201ENST00000470091 FAM217AQ8IXS0 508 aa13.95□□□□□ -0.18
LINC00173-201ENST00000470091 PRELID2Q8N945 189 aa13.95□□□□□ -0.18
LINC00173-201ENST00000470091 KCTD6Q8NC69 237 aa13.95□□□□□ -0.18
LINC00173-201ENST00000470091 CADM4Q8NFZ8 388 aa13.95□□□□□ -0.18
LINC00173-201ENST00000470091 SETD7Q8WTS6 366 aaKnown RBP13.95□□□□□ -0.18
LINC00173-201ENST00000470091 TEKT4Q8WW24 435 aa13.95□□□□□ -0.18
LINC00173-201ENST00000470091 ZCCHC14Q8WYQ9 949 aaKnown RBP13.95□□□□□ -0.18
LINC00173-201ENST00000470091 DDX47Q9H0S4 455 aaKnown RBP13.95□□□□□ -0.18
LINC00173-201ENST00000470091 ABCC13Q9NSE7 274 aa13.95□□□□□ -0.18
LINC00173-201ENST00000470091 PIGVQ9NUD9 493 aa13.95□□□□□ -0.18
LINC00173-201ENST00000470091 DDIT4Q9NX09 232 aa13.95□□□□□ -0.18
LINC00173-201ENST00000470091 RRN3Q9NYV6 651 aa13.95□□□□□ -0.18
LINC00173-201ENST00000470091 STIM2Q9P246 746 aa13.95□□□□□ -0.18
LINC00173-201ENST00000470091 MSRB2Q9Y3D2 182 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms