RNA–Protein interactions for RNA: ENST00000469415.1

MCF2L-221, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best)

Gene MCF2L, Length 3,027 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-221ENST00000469415 A0A1W2PQH9 124 aa18.12■□□□□ 0.49
MCF2L-221ENST00000469415 HNRNPCL1O60812 293 aaKnown RBP18.12■□□□□ 0.49
MCF2L-221ENST00000469415 PIGNO95427 931 aa18.12■□□□□ 0.49
MCF2L-221ENST00000469415 ASGR1P07306 291 aa18.12■□□□□ 0.49
MCF2L-221ENST00000469415 ZCCHC18P0CG32 403 aa18.12■□□□□ 0.49
MCF2L-221ENST00000469415 HNRNPLP14866 589 aaKnown RBP eCLIP18.12■□□□□ 0.49
MCF2L-221ENST00000469415 PBX3P40426 434 aa18.12■□□□□ 0.49
MCF2L-221ENST00000469415 CDH17Q12864 832 aa18.12■□□□□ 0.49
MCF2L-221ENST00000469415 ZNF789Q5FWF6 425 aa18.12■□□□□ 0.49
MCF2L-221ENST00000469415 ZNF470Q6ECI4 717 aa18.12■□□□□ 0.49
MCF2L-221ENST00000469415 CEP97Q8IW35 865 aa18.12■□□□□ 0.49
MCF2L-221ENST00000469415 PPFIBP2Q8ND30 876 aa18.12■□□□□ 0.49
MCF2L-221ENST00000469415 ELMO2Q96JJ3 720 aa18.12■□□□□ 0.49
MCF2L-221ENST00000469415 TRPV6Q9H1D0 765 aa18.12■□□□□ 0.49
MCF2L-221ENST00000469415 DLGAP2Q9P1A6 1054 aa18.12■□□□□ 0.49
MCF2L-221ENST00000469415 OR1G1P47890 313 aa18.12■□□□□ 0.49
MCF2L-221ENST00000469415 GRIA4P48058 902 aa18.12■□□□□ 0.49
MCF2L-221ENST00000469415 GALNT2Q10471 571 aa18.12■□□□□ 0.49
MCF2L-221ENST00000469415 BIRC2Q13490 618 aa18.12■□□□□ 0.49
MCF2L-221ENST00000469415 INTS6LQ5JSJ4 861 aaKnown RBP18.12■□□□□ 0.49
MCF2L-221ENST00000469415 CCNJLQ8IV13 435 aa18.12■□□□□ 0.49
MCF2L-221ENST00000469415 ENDOVQ8N8Q3 282 aaKnown RBP18.12■□□□□ 0.49
MCF2L-221ENST00000469415 TRIB2Q92519 343 aa18.12■□□□□ 0.49
MCF2L-221ENST00000469415 TSNARE1Q96NA8 513 aa18.12■□□□□ 0.49
MCF2L-221ENST00000469415 CATSPER2Q96P56 530 aa18.12■□□□□ 0.49
MCF2L-221ENST00000469415 MTG1Q9BT17 334 aaPredicted RBP18.12■□□□□ 0.49
MCF2L-221ENST00000469415 SOX13Q9UN79 622 aa18.12■□□□□ 0.49
MCF2L-221ENST00000469415 G3V2L1 256 aa18.12■□□□□ 0.49
MCF2L-221ENST00000469415 SCAMP3O14828 347 aaKnown RBP18.12■□□□□ 0.49
MCF2L-221ENST00000469415 PTPRCAPQ14761 206 aa18.12■□□□□ 0.49
MCF2L-221ENST00000469415 PCBP1Q15365 356 aaKnown RBP eCLIP18.12■□□□□ 0.49
MCF2L-221ENST00000469415 ARL13AQ5H913 290 aaPredicted RBP18.12■□□□□ 0.49
MCF2L-221ENST00000469415 NAIF1Q69YI7 327 aaPredicted RBP18.12■□□□□ 0.49
MCF2L-221ENST00000469415 TMEM154Q6P9G4 183 aa18.12■□□□□ 0.49
MCF2L-221ENST00000469415 TMEM86AQ8N2M4 240 aa18.12■□□□□ 0.49
MCF2L-221ENST00000469415 ATAD1Q8NBU5 361 aa18.12■□□□□ 0.49
MCF2L-221ENST00000469415 USP13Q92995 863 aaPredicted RBP18.12■□□□□ 0.49
MCF2L-221ENST00000469415 NTAN1Q96AB6 310 aa18.12■□□□□ 0.49
MCF2L-221ENST00000469415 NT5MQ9NPB1 228 aa18.12■□□□□ 0.49
MCF2L-221ENST00000469415 SLC27A5Q9Y2P5 690 aa18.12■□□□□ 0.49
MCF2L-221ENST00000469415 TRIM13O60858 407 aa18.11■□□□□ 0.49
MCF2L-221ENST00000469415 TM7SF2O76062 418 aa18.11■□□□□ 0.49
MCF2L-221ENST00000469415 TOMM70O94826 608 aa18.11■□□□□ 0.49
MCF2L-221ENST00000469415 HLA-DQB2P05538 268 aa18.11■□□□□ 0.49
MCF2L-221ENST00000469415 NAPEPLDQ6IQ20 393 aa18.11■□□□□ 0.49
MCF2L-221ENST00000469415 PTAR1Q7Z6K3 402 aaPredicted RBP18.11■□□□□ 0.49
MCF2L-221ENST00000469415 RYBPQ8N488 228 aaPredicted RBP18.11■□□□□ 0.49
MCF2L-221ENST00000469415 ACMSDQ8TDX5 336 aa18.11■□□□□ 0.49
MCF2L-221ENST00000469415 SH3TC2Q8TF17 1288 aa18.11■□□□□ 0.49
MCF2L-221ENST00000469415 HDAC11Q96DB2 347 aa18.11■□□□□ 0.49
MCF2L-221ENST00000469415 LENG8Q96PV6 779 aaPredicted RBP18.11■□□□□ 0.49
MCF2L-221ENST00000469415 XPR1Q9UBH6 696 aa18.11■□□□□ 0.49
MCF2L-221ENST00000469415 OR51F1A6NGY5 319 aa18.11■□□□□ 0.49
MCF2L-221ENST00000469415 F9P00740 461 aa18.11■□□□□ 0.49
MCF2L-221ENST00000469415 FLT3LGP49771 235 aa18.11■□□□□ 0.49
MCF2L-221ENST00000469415 EFEMP1Q12805 493 aa18.11■□□□□ 0.49
MCF2L-221ENST00000469415 CSHL1Q14406 222 aa18.11■□□□□ 0.49
MCF2L-221ENST00000469415 LPCAT4Q643R3 524 aa18.11■□□□□ 0.49
MCF2L-221ENST00000469415 KCTD11Q693B1 232 aa18.11■□□□□ 0.49
MCF2L-221ENST00000469415 IZUMO2Q6UXV1 221 aa18.11■□□□□ 0.49
MCF2L-221ENST00000469415 LMNTD2Q8IXW0 634 aa18.11■□□□□ 0.49
MCF2L-221ENST00000469415 FSTL5Q8N475 847 aaPredicted RBP18.11■□□□□ 0.49
MCF2L-221ENST00000469415 OR6P1Q8NGX9 317 aa18.11■□□□□ 0.49
MCF2L-221ENST00000469415 SUDS3Q9H7L9 328 aaPredicted RBP18.11■□□□□ 0.49
MCF2L-221ENST00000469415 OSER1Q9NX31 292 aa18.11■□□□□ 0.49
MCF2L-221ENST00000469415 MKS1Q9NXB0 559 aa18.11■□□□□ 0.49
MCF2L-221ENST00000469415 DPPA5A6NC42 116 aa18.1■□□□□ 0.49
MCF2L-221ENST00000469415 PKNOX1P55347 436 aa18.1■□□□□ 0.49
MCF2L-221ENST00000469415 TSPY1Q01534 308 aa18.1■□□□□ 0.49
MCF2L-221ENST00000469415 KCNA10Q16322 511 aa18.1■□□□□ 0.49
MCF2L-221ENST00000469415 RAB41Q5JT25 222 aa18.1■□□□□ 0.49
MCF2L-221ENST00000469415 CAPRIN2Q6IMN6 1127 aaKnown RBP18.1■□□□□ 0.49
MCF2L-221ENST00000469415 BNIPLQ7Z465 357 aa18.1■□□□□ 0.49
MCF2L-221ENST00000469415 PHF21BQ96EK2 531 aa18.1■□□□□ 0.49
MCF2L-221ENST00000469415 ZNF333Q96JL9 665 aa18.1■□□□□ 0.49
MCF2L-221ENST00000469415 SLC9A7Q96T83 725 aa18.1■□□□□ 0.49
MCF2L-221ENST00000469415 TBL1YQ9BQ87 522 aa18.1■□□□□ 0.49
MCF2L-221ENST00000469415 SENP6Q9GZR1 1112 aaPredicted RBP18.1■□□□□ 0.49
MCF2L-221ENST00000469415 IL22Q9GZX6 179 aa18.1■□□□□ 0.49
MCF2L-221ENST00000469415 LRRC42Q9Y546 428 aa18.1■□□□□ 0.49
MCF2L-221ENST00000469415 PRRC2BQ5JSZ5 2229 aaKnown RBP18.1■□□□□ 0.49
MCF2L-221ENST00000469415 A0A088AWK7 358 aa18.1■□□□□ 0.49
MCF2L-221ENST00000469415 J3KR12 359 aa18.1■□□□□ 0.49
MCF2L-221ENST00000469415 PAPOLAP51003 745 aaKnown RBP18.1■□□□□ 0.49
MCF2L-221ENST00000469415 RABGAP1LQ5R372 815 aa18.1■□□□□ 0.49
MCF2L-221ENST00000469415 RBM20Q5T481 1227 aaKnown RBP18.1■□□□□ 0.49
MCF2L-221ENST00000469415 GTSE1Q9NYZ3 720 aa18.1■□□□□ 0.49
MCF2L-221ENST00000469415 HCSTQ9UBK5 93 aa18.1■□□□□ 0.49
MCF2L-221ENST00000469415 TLL2Q9Y6L7 1015 aa18.1■□□□□ 0.49
MCF2L-221ENST00000469415 GPR182O15218 404 aa18.09■□□□□ 0.49
MCF2L-221ENST00000469415 MAP3K7O43318 606 aa18.09■□□□□ 0.49
MCF2L-221ENST00000469415 CNTN5O94779 1100 aa18.09■□□□□ 0.49
MCF2L-221ENST00000469415 ANPEPP15144 967 aa18.09■□□□□ 0.49
MCF2L-221ENST00000469415 ATP6V1C1P21283 382 aa18.09■□□□□ 0.49
MCF2L-221ENST00000469415 GRK2P25098 689 aa18.09■□□□□ 0.49
MCF2L-221ENST00000469415 NUDT2P50583 147 aa18.09■□□□□ 0.49
MCF2L-221ENST00000469415 YWHAHQ04917 246 aaPredicted RBP18.09■□□□□ 0.49
MCF2L-221ENST00000469415 FBXO48Q5FWF7 155 aa18.09■□□□□ 0.49
MCF2L-221ENST00000469415 CNSTQ6PJW8 725 aa18.09■□□□□ 0.49
MCF2L-221ENST00000469415 ZC3HC1Q86WB0 502 aaKnown RBP18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms