RNA–Protein interactions for RNA: ENST00000469232.5

NPHP3-204, Transcript of nephrocystin 3, humanhuman

TSL 2

Gene NPHP3, Length 1,616 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-204ENST00000469232 VOPP1Q96AW1 172 aa8.32□□□□□ -1.08
NPHP3-204ENST00000469232 PSKH2Q96QS6 385 aa8.32□□□□□ -1.08
NPHP3-204ENST00000469232 GORASP1Q9BQQ3 440 aa8.32□□□□□ -1.08
NPHP3-204ENST00000469232 RPP25Q9BUL9 199 aaKnown RBP8.32□□□□□ -1.08
NPHP3-204ENST00000469232 BBS2Q9BXC9 721 aa8.32□□□□□ -1.08
NPHP3-204ENST00000469232 PARD6BQ9BYG5 372 aa8.32□□□□□ -1.08
NPHP3-204ENST00000469232 GBA3Q9H227 469 aa8.32□□□□□ -1.08
NPHP3-204ENST00000469232 C10orf88Q9H8K7 445 aa8.32□□□□□ -1.08
NPHP3-204ENST00000469232 EIF2B3Q9NR50 452 aaKnown RBP8.32□□□□□ -1.08
NPHP3-204ENST00000469232 FAM114A2Q9NRY5 505 aa8.32□□□□□ -1.08
NPHP3-204ENST00000469232 SHOC2Q9UQ13 582 aa8.32□□□□□ -1.08
NPHP3-204ENST00000469232 HS3ST2Q9Y278 367 aa8.32□□□□□ -1.08
NPHP3-204ENST00000469232 UTP11Q9Y3A2 253 aaKnown RBP8.32□□□□□ -1.08
NPHP3-204ENST00000469232 C5orf42Q9H799 3197 aa8.31□□□□□ -1.08
NPHP3-204ENST00000469232 MYOFQ9NZM1 2061 aa8.31□□□□□ -1.08
NPHP3-204ENST00000469232 SPTBN5Q9NRC6 3674 aaKnown RBP8.31□□□□□ -1.08
NPHP3-204ENST00000469232 H0Y626 953 aa8.31□□□□□ -1.08
NPHP3-204ENST00000469232 SGK1O00141 431 aa8.31□□□□□ -1.08
NPHP3-204ENST00000469232 KCNK1O00180 336 aa8.31□□□□□ -1.08
NPHP3-204ENST00000469232 DFFAO00273 331 aa8.31□□□□□ -1.08
NPHP3-204ENST00000469232 SUN1O94901 812 aa8.31□□□□□ -1.08
NPHP3-204ENST00000469232 RHOXF2BP0C7M4 288 aa8.31□□□□□ -1.08
NPHP3-204ENST00000469232 ZSCAN5DPP0CG00 497 aa8.31□□□□□ -1.08
NPHP3-204ENST00000469232 H2AFXP16104 143 aaPredicted RBP8.31□□□□□ -1.08
NPHP3-204ENST00000469232 CR2P20023 1033 aa8.31□□□□□ -1.08
NPHP3-204ENST00000469232 TPSB2P20231 275 aa8.31□□□□□ -1.08
NPHP3-204ENST00000469232 MCM3P25205 808 aa8.31□□□□□ -1.08
NPHP3-204ENST00000469232 CD70P32970 193 aa8.31□□□□□ -1.08
NPHP3-204ENST00000469232 FDFT1P37268 417 aa8.31□□□□□ -1.08
NPHP3-204ENST00000469232 HSPA9P38646 679 aaKnown RBP8.31□□□□□ -1.08
NPHP3-204ENST00000469232 OPRD1P41143 372 aa8.31□□□□□ -1.08
NPHP3-204ENST00000469232 CSKP41240 450 aa8.31□□□□□ -1.08
NPHP3-204ENST00000469232 MAGEA3P43357 314 aa8.31□□□□□ -1.08
NPHP3-204ENST00000469232 CSNK1DP48730 415 aa8.31□□□□□ -1.08
NPHP3-204ENST00000469232 RENBPP51606 427 aa8.31□□□□□ -1.08
NPHP3-204ENST00000469232 NRLP54845 237 aa8.31□□□□□ -1.08
NPHP3-204ENST00000469232 CDK16Q00536 496 aa8.31□□□□□ -1.08
NPHP3-204ENST00000469232 SLC7A5Q01650 507 aa8.31□□□□□ -1.08
NPHP3-204ENST00000469232 CAV1Q03135 178 aa8.31□□□□□ -1.08
NPHP3-204ENST00000469232 AP1B1Q10567 949 aa8.31□□□□□ -1.08
NPHP3-204ENST00000469232 CDH18Q13634 790 aa8.31□□□□□ -1.08
NPHP3-204ENST00000469232 KCNJ11Q14654 390 aa8.31□□□□□ -1.08
NPHP3-204ENST00000469232 MORF4L2Q15014 288 aa8.31□□□□□ -1.08
NPHP3-204ENST00000469232 TRADDQ15628 312 aa8.31□□□□□ -1.08
NPHP3-204ENST00000469232 TPSAB1Q15661 275 aa8.31□□□□□ -1.08
NPHP3-204ENST00000469232 RALGPS1Q5JS13 557 aa8.31□□□□□ -1.08
NPHP3-204ENST00000469232 RNF219Q5W0B1 726 aaPredicted RBP8.31□□□□□ -1.08
NPHP3-204ENST00000469232 HIBCHQ6NVY1 386 aaPredicted RBP8.31□□□□□ -1.08
NPHP3-204ENST00000469232 TPGS1Q6ZTW0 290 aa8.31□□□□□ -1.08
NPHP3-204ENST00000469232 RELL1Q8IUW5 271 aa8.31□□□□□ -1.08
NPHP3-204ENST00000469232 IFT20Q8IY31 132 aa8.31□□□□□ -1.08
NPHP3-204ENST00000469232 CARNMT1Q8N4J0 409 aa8.31□□□□□ -1.08
NPHP3-204ENST00000469232 CPA6Q8N4T0 437 aa8.31□□□□□ -1.08
NPHP3-204ENST00000469232 NAT8LQ8N9F0 302 aa8.31□□□□□ -1.08
NPHP3-204ENST00000469232 BBOF1Q8ND07 529 aa8.31□□□□□ -1.08
NPHP3-204ENST00000469232 MCUQ8NE86 351 aa8.31□□□□□ -1.08
NPHP3-204ENST00000469232 ARRDC2Q8TBH0 407 aa8.31□□□□□ -1.08
NPHP3-204ENST00000469232 HNRNPLLQ8WVV9 542 aaKnown RBP8.31□□□□□ -1.08
NPHP3-204ENST00000469232 CPT1BQ92523 772 aa8.31□□□□□ -1.08
NPHP3-204ENST00000469232 ISG20Q96AZ6 181 aaKnown RBP8.31□□□□□ -1.08
NPHP3-204ENST00000469232 LRRC45Q96CN5 670 aa8.31□□□□□ -1.08
NPHP3-204ENST00000469232 SNF8Q96H20 258 aa8.31□□□□□ -1.08
NPHP3-204ENST00000469232 PPP1R2P1Q96PQ5 205 aa8.31□□□□□ -1.08
NPHP3-204ENST00000469232 FCRL5Q96RD9 977 aa8.31□□□□□ -1.08
NPHP3-204ENST00000469232 FERMT1Q9BQL6 677 aa8.31□□□□□ -1.08
NPHP3-204ENST00000469232 MGME1Q9BQP7 344 aa8.31□□□□□ -1.08
NPHP3-204ENST00000469232 RHOXF2Q9BQY4 288 aa8.31□□□□□ -1.08
NPHP3-204ENST00000469232 C2orf49Q9BVC5 232 aaPredicted RBP8.31□□□□□ -1.08
NPHP3-204ENST00000469232 TRMT61BQ9BVS5 477 aaKnown RBP8.31□□□□□ -1.08
NPHP3-204ENST00000469232 REPIN1Q9BWE0 567 aaKnown RBP8.31□□□□□ -1.08
NPHP3-204ENST00000469232 FOXP3Q9BZS1 431 aa8.31□□□□□ -1.08
NPHP3-204ENST00000469232 EPB41L5Q9HCM4 733 aa8.31□□□□□ -1.08
NPHP3-204ENST00000469232 ABCB8Q9NUT2 735 aa8.31□□□□□ -1.08
NPHP3-204ENST00000469232 VPS51Q9UID3 782 aa8.31□□□□□ -1.08
NPHP3-204ENST00000469232 NUMBLQ9Y6R0 609 aa8.31□□□□□ -1.08
NPHP3-204ENST00000469232 MUC22E2RYF6 1773 aaPredicted RBP8.3□□□□□ -1.08
NPHP3-204ENST00000469232 ERI2A8K979 691 aaKnown RBP8.3□□□□□ -1.08
NPHP3-204ENST00000469232 TULP3O75386 442 aa8.3□□□□□ -1.08
NPHP3-204ENST00000469232 ZNF821O75541 412 aaPredicted RBP8.3□□□□□ -1.08
NPHP3-204ENST00000469232 STK10O94804 968 aaKnown RBP8.3□□□□□ -1.08
NPHP3-204ENST00000469232 METTL18O95568 372 aa8.3□□□□□ -1.08
NPHP3-204ENST00000469232 JCHAINP01591 159 aa8.3□□□□□ -1.08
NPHP3-204ENST00000469232 PABPC1P11940 636 aaKnown RBP8.3□□□□□ -1.08
NPHP3-204ENST00000469232 CES1P23141 567 aa8.3□□□□□ -1.08
NPHP3-204ENST00000469232 GJA4P35212 333 aa8.3□□□□□ -1.08
NPHP3-204ENST00000469232 CARSP49589 748 aaKnown RBP8.3□□□□□ -1.08
NPHP3-204ENST00000469232 GEMIN4P57678 1058 aaKnown RBP8.3□□□□□ -1.08
NPHP3-204ENST00000469232 VSNL1P62760 191 aa8.3□□□□□ -1.08
NPHP3-204ENST00000469232 MRPS25P82663 173 aaKnown RBP8.3□□□□□ -1.08
NPHP3-204ENST00000469232 GUCY2DQ02846 1103 aa8.3□□□□□ -1.08
NPHP3-204ENST00000469232 SULT2A1Q06520 285 aa8.3□□□□□ -1.08
NPHP3-204ENST00000469232 NSUN2Q08J23 767 aaKnown RBP eCLIP8.3□□□□□ -1.08
NPHP3-204ENST00000469232 SLC10A7Q0GE19 358 aa8.3□□□□□ -1.08
NPHP3-204ENST00000469232 NR1H3Q13133 447 aa8.3□□□□□ -1.08
NPHP3-204ENST00000469232 IHHQ14623 411 aa8.3□□□□□ -1.08
NPHP3-204ENST00000469232 EIF4HQ15056 248 aaKnown RBP8.3□□□□□ -1.08
NPHP3-204ENST00000469232 BRD3Q15059 726 aa8.3□□□□□ -1.08
NPHP3-204ENST00000469232 PPP1R7Q15435 360 aa8.3□□□□□ -1.08
NPHP3-204ENST00000469232 CYTH1Q15438 398 aa8.3□□□□□ -1.08
NPHP3-204ENST00000469232 ELF2Q15723 593 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms