RNA–Protein interactions for RNA: ENST00000469087.1

RUNX1-213, Transcript of runt related transcription factor 1, humanhuman

TSL 1 (best)

Gene RUNX1, Length 1,790 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX1-213ENST00000469087 MAGEA6P43360 314 aa13.07□□□□□ -0.32
RUNX1-213ENST00000469087 MMP13P45452 471 aa13.07□□□□□ -0.32
RUNX1-213ENST00000469087 MAXP61244 160 aa13.07□□□□□ -0.32
RUNX1-213ENST00000469087 SKIV2LQ15477 1246 aaKnown RBP13.07□□□□□ -0.32
RUNX1-213ENST00000469087 PLEKHG6Q3KR16 790 aa13.07□□□□□ -0.32
RUNX1-213ENST00000469087 MAP9Q49MG5 647 aa13.07□□□□□ -0.32
RUNX1-213ENST00000469087 EMBQ6PCB8 327 aa13.07□□□□□ -0.32
RUNX1-213ENST00000469087 HOOK3Q86VS8 718 aa13.07□□□□□ -0.32
RUNX1-213ENST00000469087 NSMCE1Q8WV22 266 aa13.07□□□□□ -0.32
RUNX1-213ENST00000469087 ATP2A3Q93084 1043 aa13.07□□□□□ -0.32
RUNX1-213ENST00000469087 GBA3Q9H227 469 aa13.07□□□□□ -0.32
RUNX1-213ENST00000469087 ECT2Q9H8V3 914 aa13.07□□□□□ -0.32
RUNX1-213ENST00000469087 GLOD4Q9HC38 313 aa13.07□□□□□ -0.32
RUNX1-213ENST00000469087 ARFGAP3Q9NP61 516 aa13.07□□□□□ -0.32
RUNX1-213ENST00000469087 NT5MQ9NPB1 228 aa13.07□□□□□ -0.32
RUNX1-213ENST00000469087 HPS4Q9NQG7 708 aa13.07□□□□□ -0.32
RUNX1-213ENST00000469087 EPS15L1Q9UBC2 864 aa13.07□□□□□ -0.32
RUNX1-213ENST00000469087 VPS51Q9UID3 782 aa13.07□□□□□ -0.32
RUNX1-213ENST00000469087 MUSKO15146 869 aa13.06□□□□□ -0.32
RUNX1-213ENST00000469087 MBTPS2O43462 519 aa13.06□□□□□ -0.32
RUNX1-213ENST00000469087 ECI2O75521 394 aa13.06□□□□□ -0.32
RUNX1-213ENST00000469087 NFATC1O95644 943 aa13.06□□□□□ -0.32
RUNX1-213ENST00000469087 MT-CO1P00395 513 aa13.06□□□□□ -0.32
RUNX1-213ENST00000469087 CISD3P0C7P0 127 aa13.06□□□□□ -0.32
RUNX1-213ENST00000469087 ADH5P11766 374 aa13.06□□□□□ -0.32
RUNX1-213ENST00000469087 FOSL2P15408 326 aa13.06□□□□□ -0.32
RUNX1-213ENST00000469087 SLC12A1Q13621 1099 aa13.06□□□□□ -0.32
RUNX1-213ENST00000469087 IHHQ14623 411 aa13.06□□□□□ -0.32
RUNX1-213ENST00000469087 PDGFRLQ15198 375 aa13.06□□□□□ -0.32
RUNX1-213ENST00000469087 CYTH1Q15438 398 aa13.06□□□□□ -0.32
RUNX1-213ENST00000469087 GAB4Q2WGN9 574 aa13.06□□□□□ -0.32
RUNX1-213ENST00000469087 PITRM1Q5JRX3 1037 aa13.06□□□□□ -0.32
RUNX1-213ENST00000469087 TMCO4Q5TGY1 634 aa13.06□□□□□ -0.32
RUNX1-213ENST00000469087 ITPRIPL1Q6GPH6 555 aa13.06□□□□□ -0.32
RUNX1-213ENST00000469087 C12orf40Q86WS4 652 aa13.06□□□□□ -0.32
RUNX1-213ENST00000469087 ZCCHC9Q8N567 271 aaKnown RBP13.06□□□□□ -0.32
RUNX1-213ENST00000469087 DCAF4L2Q8NA75 395 aa13.06□□□□□ -0.32
RUNX1-213ENST00000469087 TSEN2Q8NCE0 465 aaKnown RBP13.06□□□□□ -0.32
RUNX1-213ENST00000469087 SPATA22Q8NHS9 363 aa13.06□□□□□ -0.32
RUNX1-213ENST00000469087 CAVIN3Q969G5 261 aa13.06□□□□□ -0.32
RUNX1-213ENST00000469087 EXOC4Q96A65 974 aa13.06□□□□□ -0.32
RUNX1-213ENST00000469087 FCRL5Q96RD9 977 aa13.06□□□□□ -0.32
RUNX1-213ENST00000469087 MLPHQ9BV36 600 aaPredicted RBP13.06□□□□□ -0.32
RUNX1-213ENST00000469087 UBP1Q9NZI7 540 aa13.06□□□□□ -0.32
RUNX1-213ENST00000469087 UBA2Q9UBT2 640 aaPredicted RBP13.06□□□□□ -0.32
RUNX1-213ENST00000469087 MTRF1LQ9UGC7 380 aaKnown RBP13.06□□□□□ -0.32
RUNX1-213ENST00000469087 SHOC2Q9UQ13 582 aa13.06□□□□□ -0.32
RUNX1-213ENST00000469087 TTLL3Q9Y4R7 772 aa13.06□□□□□ -0.32
RUNX1-213ENST00000469087 KIF26AQ9ULI4 1882 aaPredicted RBP13.06□□□□□ -0.32
RUNX1-213ENST00000469087 TTC24A2A3L6 582 aaPredicted RBP13.05□□□□□ -0.32
RUNX1-213ENST00000469087 E7EVH7 732 aa13.05□□□□□ -0.32
RUNX1-213ENST00000469087 SMAPO00193 183 aa13.05□□□□□ -0.32
RUNX1-213ENST00000469087 HOXC11O43248 304 aaPredicted RBP13.05□□□□□ -0.32
RUNX1-213ENST00000469087 NEBLO76041 1014 aa13.05□□□□□ -0.32
RUNX1-213ENST00000469087 MT-CYBP00156 380 aaPredicted RBP13.05□□□□□ -0.32
RUNX1-213ENST00000469087 ADH1CP00326 375 aa13.05□□□□□ -0.32
RUNX1-213ENST00000469087 GRIA1P42261 906 aa13.05□□□□□ -0.32
RUNX1-213ENST00000469087 DHX9Q08211 1270 aaKnown RBP13.05□□□□□ -0.32
RUNX1-213ENST00000469087 ITKQ08881 620 aa13.05□□□□□ -0.32
RUNX1-213ENST00000469087 NIPAL4Q0D2K0 466 aa13.05□□□□□ -0.32
RUNX1-213ENST00000469087 MTM1Q13496 603 aa13.05□□□□□ -0.32
RUNX1-213ENST00000469087 RUNX3Q13761 415 aa13.05□□□□□ -0.32
RUNX1-213ENST00000469087 FUT11Q495W5 492 aa13.05□□□□□ -0.32
RUNX1-213ENST00000469087 HABP4Q5JVS0 413 aaKnown RBP13.05□□□□□ -0.32
RUNX1-213ENST00000469087 TMEM215Q68D42 235 aa13.05□□□□□ -0.32
RUNX1-213ENST00000469087 KCTD11Q693B1 232 aa13.05□□□□□ -0.32
RUNX1-213ENST00000469087 KIAA0907Q7Z7F0 614 aaPredicted RBP13.05□□□□□ -0.32
RUNX1-213ENST00000469087 YAF2Q8IY57 180 aa13.05□□□□□ -0.32
RUNX1-213ENST00000469087 ACDQ96AP0 544 aa13.05□□□□□ -0.32
RUNX1-213ENST00000469087 OXNAD1Q96HP4 312 aaPredicted RBP13.05□□□□□ -0.32
RUNX1-213ENST00000469087 C2orf49Q9BVC5 232 aaPredicted RBP13.05□□□□□ -0.32
RUNX1-213ENST00000469087 SLC2A11Q9BYW1 496 aa13.05□□□□□ -0.32
RUNX1-213ENST00000469087 TXLNGYQ9BZA5 131 aa13.05□□□□□ -0.32
RUNX1-213ENST00000469087 DNAJC17Q9NVM6 304 aaKnown RBP13.05□□□□□ -0.32
RUNX1-213ENST00000469087 GTSE1Q9NYZ3 720 aa13.05□□□□□ -0.32
RUNX1-213ENST00000469087 GGA2Q9UJY4 613 aa13.05□□□□□ -0.32
RUNX1-213ENST00000469087 NUMBLQ9Y6R0 609 aa13.05□□□□□ -0.32
RUNX1-213ENST00000469087 ANHXE9PGG2 379 aa13.04□□□□□ -0.32
RUNX1-213ENST00000469087 K7ERQ8 282 aa13.04□□□□□ -0.32
RUNX1-213ENST00000469087 NDC80O14777 642 aa13.04□□□□□ -0.32
RUNX1-213ENST00000469087 AVILO75366 819 aa13.04□□□□□ -0.32
RUNX1-213ENST00000469087 GJB3O75712 270 aa13.04□□□□□ -0.32
RUNX1-213ENST00000469087 PABPC1P11940 636 aaKnown RBP13.04□□□□□ -0.32
RUNX1-213ENST00000469087 TPSB2P20231 275 aa13.04□□□□□ -0.32
RUNX1-213ENST00000469087 CTSOP43234 321 aaPredicted RBP13.04□□□□□ -0.32
RUNX1-213ENST00000469087 SLC6A11P48066 632 aa13.04□□□□□ -0.32
RUNX1-213ENST00000469087 DSC2Q02487 901 aa13.04□□□□□ -0.32
RUNX1-213ENST00000469087 OLIG2Q13516 323 aa13.04□□□□□ -0.32
RUNX1-213ENST00000469087 SPARCL1Q14515 664 aa13.04□□□□□ -0.32
RUNX1-213ENST00000469087 RFTN1Q14699 578 aaPredicted RBP13.04□□□□□ -0.32
RUNX1-213ENST00000469087 TPSAB1Q15661 275 aa13.04□□□□□ -0.32
RUNX1-213ENST00000469087 GEN1Q17RS7 908 aa13.04□□□□□ -0.32
RUNX1-213ENST00000469087 INO80DQ53TQ3 878 aaPredicted RBP13.04□□□□□ -0.32
RUNX1-213ENST00000469087 FNBP1LQ5T0N5 605 aa13.04□□□□□ -0.32
RUNX1-213ENST00000469087 TMC3Q7Z5M5 1100 aa13.04□□□□□ -0.32
RUNX1-213ENST00000469087 PRPF39Q86UA1 669 aaKnown RBP13.04□□□□□ -0.32
RUNX1-213ENST00000469087 ADIPOR2Q86V24 386 aa13.04□□□□□ -0.32
RUNX1-213ENST00000469087 CAND1Q86VP6 1230 aaKnown RBP13.04□□□□□ -0.32
RUNX1-213ENST00000469087 CCDC25Q86WR0 208 aa13.04□□□□□ -0.32
RUNX1-213ENST00000469087 ETFBKMTQ8IXQ9 262 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms