RNA–Protein interactions for RNA: ENST00000468844.1

RPL39-202, Transcript of ribosomal protein L39, humanhuman

TSL 1 (best)

Gene RPL39, Length 1,915 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39-202ENST00000468844 NAIF1Q69YI7 327 aaPredicted RBP17.83■□□□□ 0.44
RPL39-202ENST00000468844 WDR93Q6P2C0 686 aa17.83■□□□□ 0.44
RPL39-202ENST00000468844 ARHGEF18Q6ZSZ5 1173 aa17.83■□□□□ 0.44
RPL39-202ENST00000468844 PID1Q7Z2X4 250 aa17.83■□□□□ 0.44
RPL39-202ENST00000468844 ADIPOR2Q86V24 386 aa17.83■□□□□ 0.44
RPL39-202ENST00000468844 TEX26Q8N6G2 289 aa17.83■□□□□ 0.44
RPL39-202ENST00000468844 SNF8Q96H20 258 aa17.83■□□□□ 0.44
RPL39-202ENST00000468844 ZNF599Q96NL3 588 aa17.83■□□□□ 0.44
RPL39-202ENST00000468844 RBM22Q9NW64 420 aaKnown RBP eCLIP17.83■□□□□ 0.44
RPL39-202ENST00000468844 DNALI1O14645 258 aaPredicted RBP17.82■□□□□ 0.44
RPL39-202ENST00000468844 MT-CO1P00395 513 aa17.82■□□□□ 0.44
RPL39-202ENST00000468844 MYBL2P10244 700 aa17.82■□□□□ 0.44
RPL39-202ENST00000468844 ECHS1P30084 290 aa17.82■□□□□ 0.44
RPL39-202ENST00000468844 NR1H3Q13133 447 aa17.82■□□□□ 0.44
RPL39-202ENST00000468844 IFT20Q8IY31 132 aa17.82■□□□□ 0.44
RPL39-202ENST00000468844 NSMCE1Q8WV22 266 aa17.82■□□□□ 0.44
RPL39-202ENST00000468844 RUBCNQ92622 972 aa17.82■□□□□ 0.44
RPL39-202ENST00000468844 UBA2Q9UBT2 640 aaPredicted RBP17.82■□□□□ 0.44
RPL39-202ENST00000468844 TRHDEQ9UKU6 1024 aa17.82■□□□□ 0.44
RPL39-202ENST00000468844 SLC27A6Q9Y2P4 619 aa17.82■□□□□ 0.44
RPL39-202ENST00000468844 TTLL3Q9Y4R7 772 aa17.82■□□□□ 0.44
RPL39-202ENST00000468844 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP17.82■□□□□ 0.44
RPL39-202ENST00000468844 F5H423 210 aaPredicted RBP17.82■□□□□ 0.44
RPL39-202ENST00000468844 ASGR2P07307 311 aa17.82■□□□□ 0.44
RPL39-202ENST00000468844 NFKB1P19838 968 aa17.82■□□□□ 0.44
RPL39-202ENST00000468844 PSMB4P28070 264 aa17.82■□□□□ 0.44
RPL39-202ENST00000468844 OPRD1P41143 372 aa17.82■□□□□ 0.44
RPL39-202ENST00000468844 CTSOP43234 321 aaPredicted RBP17.82■□□□□ 0.44
RPL39-202ENST00000468844 MMP13P45452 471 aa17.82■□□□□ 0.44
RPL39-202ENST00000468844 BASP1P80723 227 aaKnown RBP17.82■□□□□ 0.44
RPL39-202ENST00000468844 ITPRIPL2Q3MIP1 535 aa17.82■□□□□ 0.44
RPL39-202ENST00000468844 AHI1Q8N157 1196 aa17.82■□□□□ 0.44
RPL39-202ENST00000468844 IFT81Q8WYA0 676 aa17.82■□□□□ 0.44
RPL39-202ENST00000468844 CPT1BQ92523 772 aa17.82■□□□□ 0.44
RPL39-202ENST00000468844 GORASP1Q9BQQ3 440 aa17.82■□□□□ 0.44
RPL39-202ENST00000468844 NEUROG2Q9H2A3 272 aa17.82■□□□□ 0.44
RPL39-202ENST00000468844 ETNK1Q9HBU6 452 aa17.82■□□□□ 0.44
RPL39-202ENST00000468844 RAB6BQ9NRW1 208 aa17.82■□□□□ 0.44
RPL39-202ENST00000468844 FAM114A2Q9NRY5 505 aa17.82■□□□□ 0.44
RPL39-202ENST00000468844 WHRNQ9P202 907 aa17.82■□□□□ 0.44
RPL39-202ENST00000468844 IGSF9Q9P2J2 1179 aa17.82■□□□□ 0.44
RPL39-202ENST00000468844 RAB21Q9UL25 225 aa17.82■□□□□ 0.44
RPL39-202ENST00000468844 FARP1Q9Y4F1 1045 aaPredicted RBP17.82■□□□□ 0.44
RPL39-202ENST00000468844 CKAP5Q14008 2032 aa17.81■□□□□ 0.44
RPL39-202ENST00000468844 MUSKO15146 869 aa17.81■□□□□ 0.44
RPL39-202ENST00000468844 MAXP61244 160 aa17.81■□□□□ 0.44
RPL39-202ENST00000468844 SYCP2LQ5T4T6 812 aa17.81■□□□□ 0.44
RPL39-202ENST00000468844 IZUMO3Q5VZ72 239 aa17.81■□□□□ 0.44
RPL39-202ENST00000468844 PGBD5Q8N414 524 aa17.81■□□□□ 0.44
RPL39-202ENST00000468844 SLC44A3Q8N4M1 653 aa17.81■□□□□ 0.44
RPL39-202ENST00000468844 TSEN2Q8NCE0 465 aaKnown RBP17.81■□□□□ 0.44
RPL39-202ENST00000468844 FBXO25Q8TCJ0 367 aa17.81■□□□□ 0.44
RPL39-202ENST00000468844 NXPE3Q969Y0 559 aa17.81■□□□□ 0.44
RPL39-202ENST00000468844 LRRC45Q96CN5 670 aa17.81■□□□□ 0.44
RPL39-202ENST00000468844 GBA3Q9H227 469 aa17.81■□□□□ 0.44
RPL39-202ENST00000468844 NT5MQ9NPB1 228 aa17.81■□□□□ 0.44
RPL39-202ENST00000468844 DEC1Q9P2X7 70 aa17.81■□□□□ 0.44
RPL39-202ENST00000468844 TPX2Q9ULW0 747 aaKnown RBP17.81■□□□□ 0.44
RPL39-202ENST00000468844 ATP8A1Q9Y2Q0 1164 aa17.81■□□□□ 0.44
RPL39-202ENST00000468844 TNFRSF8P28908 595 aa17.8■□□□□ 0.44
RPL39-202ENST00000468844 SOX9P48436 509 aa17.8■□□□□ 0.44
RPL39-202ENST00000468844 ITGA8P53708 1063 aa17.8■□□□□ 0.44
RPL39-202ENST00000468844 CUL1Q13616 776 aa17.8■□□□□ 0.44
RPL39-202ENST00000468844 ZNF235Q14590 738 aa17.8■□□□□ 0.44
RPL39-202ENST00000468844 RFTN1Q14699 578 aaPredicted RBP17.8■□□□□ 0.44
RPL39-202ENST00000468844 PUS10Q3MIT2 529 aaKnown RBP17.8■□□□□ 0.44
RPL39-202ENST00000468844 INO80DQ53TQ3 878 aaPredicted RBP17.8■□□□□ 0.44
RPL39-202ENST00000468844 RNASEH2BQ5TBB1 312 aaKnown RBP17.8■□□□□ 0.44
RPL39-202ENST00000468844 RETSATQ6NUM9 610 aa17.8■□□□□ 0.44
RPL39-202ENST00000468844 ZDHHC24Q6UX98 284 aa17.8■□□□□ 0.44
RPL39-202ENST00000468844 C4orf22Q6V702 233 aa17.8■□□□□ 0.44
RPL39-202ENST00000468844 GSPT2Q8IYD1 628 aaKnown RBP17.8■□□□□ 0.44
RPL39-202ENST00000468844 PHTF2Q8N3S3 785 aa17.8■□□□□ 0.44
RPL39-202ENST00000468844 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP17.8■□□□□ 0.449e-10■□□□□ 10.6
RPL39-202ENST00000468844 RPL10LQ96L21 214 aaKnown RBP17.8■□□□□ 0.44
RPL39-202ENST00000468844 PSKH2Q96QS6 385 aa17.8■□□□□ 0.44
RPL39-202ENST00000468844 ZDHHC18Q9NUE0 388 aa17.8■□□□□ 0.44
RPL39-202ENST00000468844 RSPH14Q9UHP6 348 aa17.8■□□□□ 0.44
RPL39-202ENST00000468844 NFU1Q9UMS0 254 aa17.8■□□□□ 0.44
RPL39-202ENST00000468844 FAM50BQ9Y247 325 aa17.8■□□□□ 0.44
RPL39-202ENST00000468844 BDP1A6H8Y1 2624 aa17.8■□□□□ 0.44
RPL39-202ENST00000468844 TCRBV7S3A2A0A539 114 aa17.8■□□□□ 0.44
RPL39-202ENST00000468844 TMCC1O94876 653 aa17.8■□□□□ 0.44
RPL39-202ENST00000468844 ITIH2P19823 946 aa17.8■□□□□ 0.44
RPL39-202ENST00000468844 STK19P49842 368 aaPredicted RBP17.8■□□□□ 0.44
RPL39-202ENST00000468844 SERPINH1P50454 418 aaKnown RBP17.8■□□□□ 0.44
RPL39-202ENST00000468844 PLTPP55058 493 aa17.8■□□□□ 0.44
RPL39-202ENST00000468844 KDSRQ06136 332 aa17.8■□□□□ 0.44
RPL39-202ENST00000468844 CALCOCO2Q13137 446 aa17.8■□□□□ 0.44
RPL39-202ENST00000468844 DMC1Q14565 340 aa17.8■□□□□ 0.44
RPL39-202ENST00000468844 PARP6Q2NL67 630 aa17.8■□□□□ 0.44
RPL39-202ENST00000468844 ANKRD22Q5VYY1 191 aa17.8■□□□□ 0.44
RPL39-202ENST00000468844 MBLAC2Q68D91 279 aa17.8■□□□□ 0.44
RPL39-202ENST00000468844 ITPRIPL1Q6GPH6 555 aa17.8■□□□□ 0.44
RPL39-202ENST00000468844 ART4Q93070 314 aa17.8■□□□□ 0.44
RPL39-202ENST00000468844 PRRT4C9JH25 899 aa17.79■□□□□ 0.44
RPL39-202ENST00000468844 K7ERQ8 282 aa17.79■□□□□ 0.44
RPL39-202ENST00000468844 SMAD6O43541 496 aaKnown RBP17.79■□□□□ 0.44
RPL39-202ENST00000468844 NEBLO76041 1014 aa17.79■□□□□ 0.44
RPL39-202ENST00000468844 TMEM63AO94886 807 aa17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms