RNA–Protein interactions for RNA: ENST00000468468.5

TSPAN4-211, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 2,777 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-211ENST00000468468 WDR6Q9NNW5 1121 aaKnown RBP16.05■□□□□ 0.16
TSPAN4-211ENST00000468468 MID2Q9UJV3 735 aa16.05■□□□□ 0.16
TSPAN4-211ENST00000468468 TLK1Q9UKI8 766 aa16.05■□□□□ 0.16
TSPAN4-211ENST00000468468 RAP2CQ9Y3L5 183 aa16.05■□□□□ 0.16
TSPAN4-211ENST00000468468 RAD54BQ9Y620 910 aa16.05■□□□□ 0.16
TSPAN4-211ENST00000468468 TK2O00142 265 aa16.05■□□□□ 0.16
TSPAN4-211ENST00000468468 HAS3O00219 553 aa16.05■□□□□ 0.16
TSPAN4-211ENST00000468468 CASQ2O14958 399 aaPredicted RBP16.05■□□□□ 0.16
TSPAN4-211ENST00000468468 KCNE1P15382 129 aa16.05■□□□□ 0.16
TSPAN4-211ENST00000468468 EPHA3P29320 983 aa16.05■□□□□ 0.16
TSPAN4-211ENST00000468468 GSTT1P30711 240 aa16.05■□□□□ 0.16
TSPAN4-211ENST00000468468 RPL14P50914 215 aaKnown RBP16.05■□□□□ 0.16
TSPAN4-211ENST00000468468 PGGT1BP53609 377 aa16.05■□□□□ 0.16
TSPAN4-211ENST00000468468 CDC42EP1Q00587 391 aa16.05■□□□□ 0.16
TSPAN4-211ENST00000468468 SEMA3BQ13214 749 aa16.05■□□□□ 0.16
TSPAN4-211ENST00000468468 ITGA7Q13683 1181 aa16.05■□□□□ 0.16
TSPAN4-211ENST00000468468 CNPY1Q3B7I2 92 aa16.05■□□□□ 0.16
TSPAN4-211ENST00000468468 LSM12Q3MHD2 195 aaKnown RBP16.05■□□□□ 0.16
TSPAN4-211ENST00000468468 PPM1LQ5SGD2 360 aa16.05■□□□□ 0.16
TSPAN4-211ENST00000468468 C17orf99Q6UX52 265 aa16.05■□□□□ 0.16
TSPAN4-211ENST00000468468 NTAN1Q96AB6 310 aa16.05■□□□□ 0.16
TSPAN4-211ENST00000468468 RGSL1A5PLK6 1076 aa16.04■□□□□ 0.16
TSPAN4-211ENST00000468468 YJEFN3A6XGL0 299 aa16.04■□□□□ 0.16
TSPAN4-211ENST00000468468 HDAC3O15379 428 aa16.04■□□□□ 0.16
TSPAN4-211ENST00000468468 ZNF189O75820 626 aaPredicted RBP16.04■□□□□ 0.16
TSPAN4-211ENST00000468468 PIGNO95427 931 aa16.04■□□□□ 0.16
TSPAN4-211ENST00000468468 GRIA4P48058 902 aa16.04■□□□□ 0.16
TSPAN4-211ENST00000468468 ANO4Q32M45 955 aa16.04■□□□□ 0.16
TSPAN4-211ENST00000468468 MAP3K21Q5TCX8 1036 aa16.04■□□□□ 0.16
TSPAN4-211ENST00000468468 WSCD1Q658N2 575 aa16.04■□□□□ 0.16
TSPAN4-211ENST00000468468 SEL1L3Q68CR1 1132 aa16.04■□□□□ 0.16
TSPAN4-211ENST00000468468 ITPRIPL1Q6GPH6 555 aa16.04■□□□□ 0.16
TSPAN4-211ENST00000468468 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP16.04■□□□□ 0.16
TSPAN4-211ENST00000468468 TOP6BLQ8N6T0 577 aa16.04■□□□□ 0.16
TSPAN4-211ENST00000468468 ICA1LQ8NDH6 482 aa16.04■□□□□ 0.16
TSPAN4-211ENST00000468468 SCYL1Q96KG9 808 aa16.04■□□□□ 0.16
TSPAN4-211ENST00000468468 SPATA16Q9BXB7 569 aa16.04■□□□□ 0.16
TSPAN4-211ENST00000468468 DRC3Q9H069 523 aa16.04■□□□□ 0.16
TSPAN4-211ENST00000468468 AP5M1Q9H0R1 490 aa16.04■□□□□ 0.16
TSPAN4-211ENST00000468468 FBXW11Q9UKB1 542 aa16.04■□□□□ 0.16
TSPAN4-211ENST00000468468 TRHDEQ9UKU6 1024 aa16.04■□□□□ 0.16
TSPAN4-211ENST00000468468 ZSCAN9O15535 394 aaPredicted RBP16.04■□□□□ 0.16
TSPAN4-211ENST00000468468 PHGDHO43175 533 aaKnown RBP16.04■□□□□ 0.16
TSPAN4-211ENST00000468468 MTSS1O43312 755 aa16.04■□□□□ 0.16
TSPAN4-211ENST00000468468 APOA4P06727 396 aa16.04■□□□□ 0.16
TSPAN4-211ENST00000468468 GLRBP48167 497 aa16.04■□□□□ 0.16
TSPAN4-211ENST00000468468 CPT1AP50416 773 aa16.04■□□□□ 0.16
TSPAN4-211ENST00000468468 AIF1P55008 147 aa16.04■□□□□ 0.16
TSPAN4-211ENST00000468468 LIPMQ5VYY2 423 aa16.04■□□□□ 0.16
TSPAN4-211ENST00000468468 ZYG11AQ6WRX3 759 aa16.04■□□□□ 0.16
TSPAN4-211ENST00000468468 KYQ8NBH2 561 aa16.04■□□□□ 0.16
TSPAN4-211ENST00000468468 TSNARE1Q96NA8 513 aa16.04■□□□□ 0.16
TSPAN4-211ENST00000468468 SERPINI1Q99574 410 aa16.04■□□□□ 0.16
TSPAN4-211ENST00000468468 APBA2Q99767 749 aa16.04■□□□□ 0.16
TSPAN4-211ENST00000468468 MCMBPQ9BTE3 642 aa16.04■□□□□ 0.16
TSPAN4-211ENST00000468468 IL22Q9GZX6 179 aa16.04■□□□□ 0.16
TSPAN4-211ENST00000468468 STK39Q9UEW8 545 aa16.04■□□□□ 0.16
TSPAN4-211ENST00000468468 INPP5FQ9Y2H2 1132 aa16.04■□□□□ 0.16
TSPAN4-211ENST00000468468 SNX10Q9Y5X0 201 aa16.04■□□□□ 0.16
TSPAN4-211ENST00000468468 MYADML2A6NDP7 307 aa16.04■□□□□ 0.16
TSPAN4-211ENST00000468468 MANSC4A6NHS7 340 aaPredicted RBP16.04■□□□□ 0.16
TSPAN4-211ENST00000468468 PEX1O43933 1283 aa16.04■□□□□ 0.16
TSPAN4-211ENST00000468468 FAM200BP0CF97 657 aa16.04■□□□□ 0.16
TSPAN4-211ENST00000468468 NCAM1P13591 858 aa16.04■□□□□ 0.16
TSPAN4-211ENST00000468468 AXLP30530 894 aa16.04■□□□□ 0.16
TSPAN4-211ENST00000468468 AVPR1AP37288 418 aa16.04■□□□□ 0.16
TSPAN4-211ENST00000468468 ALDH1A3P47895 512 aa16.04■□□□□ 0.16
TSPAN4-211ENST00000468468 USP10Q14694 798 aaKnown RBP16.04■□□□□ 0.16
TSPAN4-211ENST00000468468 PDK3Q15120 406 aa16.04■□□□□ 0.16
TSPAN4-211ENST00000468468 ARL13AQ5H913 290 aaPredicted RBP16.04■□□□□ 0.16
TSPAN4-211ENST00000468468 KIAA0319Q5VV43 1072 aa16.04■□□□□ 0.16
TSPAN4-211ENST00000468468 C16orf89Q6UX73 402 aa16.04■□□□□ 0.16
TSPAN4-211ENST00000468468 HDAC11Q96DB2 347 aa16.04■□□□□ 0.16
TSPAN4-211ENST00000468468 NUF2Q9BZD4 464 aa16.04■□□□□ 0.16
TSPAN4-211ENST00000468468 DDIT4Q9NX09 232 aa16.04■□□□□ 0.16
TSPAN4-211ENST00000468468 PRPF19Q9UMS4 504 aaKnown RBP16.04■□□□□ 0.16
TSPAN4-211ENST00000468468 PSMD13Q9UNM6 376 aa16.04■□□□□ 0.16
TSPAN4-211ENST00000468468 RUVBL2Q9Y230 463 aaKnown RBP16.04■□□□□ 0.16
TSPAN4-211ENST00000468468 DTNAQ9Y4J8 743 aa16.04■□□□□ 0.16
TSPAN4-211ENST00000468468 CAPN15O75808 1086 aa16.03■□□□□ 0.16
TSPAN4-211ENST00000468468 JCHAINP01591 159 aa16.03■□□□□ 0.16
TSPAN4-211ENST00000468468 SBK3P0C264 359 aa16.03■□□□□ 0.16
TSPAN4-211ENST00000468468 TFEBP19484 476 aa16.03■□□□□ 0.16
TSPAN4-211ENST00000468468 CTGFP29279 349 aa16.03■□□□□ 0.16
TSPAN4-211ENST00000468468 HCAR3P49019 387 aa16.03■□□□□ 0.16
TSPAN4-211ENST00000468468 NAGLUP54802 743 aa16.03■□□□□ 0.16
TSPAN4-211ENST00000468468 DAOAP59103 153 aa16.03■□□□□ 0.16
TSPAN4-211ENST00000468468 SCAPQ12770 1279 aa16.03■□□□□ 0.16
TSPAN4-211ENST00000468468 PCBP1Q15365 356 aaKnown RBP eCLIP16.03■□□□□ 0.16
TSPAN4-211ENST00000468468 XKR4Q5GH76 650 aa16.03■□□□□ 0.16
TSPAN4-211ENST00000468468 UBXN11Q5T124 520 aa16.03■□□□□ 0.16
TSPAN4-211ENST00000468468 OGFRL1Q5TC84 451 aaPredicted RBP16.03■□□□□ 0.16
TSPAN4-211ENST00000468468 CTU1Q7Z7A3 348 aaKnown RBP16.03■□□□□ 0.16
TSPAN4-211ENST00000468468 SDCCAG8Q86SQ7 713 aaPredicted RBP16.03■□□□□ 0.16
TSPAN4-211ENST00000468468 DSELQ8IZU8 1212 aa16.03■□□□□ 0.16
TSPAN4-211ENST00000468468 TMEM151AQ8N4L1 468 aa16.03■□□□□ 0.16
TSPAN4-211ENST00000468468 ARRDC4Q8NCT1 418 aa16.03■□□□□ 0.16
TSPAN4-211ENST00000468468 GCNAQ96QF7 691 aa16.03■□□□□ 0.16
TSPAN4-211ENST00000468468 CDRT15Q96T59 188 aa16.03■□□□□ 0.16
TSPAN4-211ENST00000468468 GPR22Q99680 433 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms