RNA–Protein interactions for RNA: ENST00000468338.5

COL4A6-205, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 5

Gene COL4A6, Length 865 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-205ENST00000468338 SH2D3CQ8N5H7 860 aa11.42□□□□□ -0.58
COL4A6-205ENST00000468338 DEFB119Q8N690 84 aa11.42□□□□□ -0.58
COL4A6-205ENST00000468338 ARFGAP1Q8N6T3 406 aa11.42□□□□□ -0.58
COL4A6-205ENST00000468338 C12orf50Q8NA57 414 aaPredicted RBP11.42□□□□□ -0.58
COL4A6-205ENST00000468338 HSPA12BQ96MM6 686 aa11.42□□□□□ -0.58
COL4A6-205ENST00000468338 C2orf49Q9BVC5 232 aaPredicted RBP11.42□□□□□ -0.58
COL4A6-205ENST00000468338 GPR174Q9BXC1 333 aa11.42□□□□□ -0.58
COL4A6-205ENST00000468338 ACE2Q9BYF1 805 aaPredicted RBP11.42□□□□□ -0.58
COL4A6-205ENST00000468338 PABPC3Q9H361 631 aaKnown RBP11.42□□□□□ -0.58
COL4A6-205ENST00000468338 CAPN10Q9HC96 672 aa11.42□□□□□ -0.58
COL4A6-205ENST00000468338 ADAMTS1Q9UHI8 967 aa11.42□□□□□ -0.58
COL4A6-205ENST00000468338 VPS51Q9UID3 782 aa11.42□□□□□ -0.58
COL4A6-205ENST00000468338 VPS28Q9UK41 221 aa11.42□□□□□ -0.58
COL4A6-205ENST00000468338 NENFQ9UMX5 172 aa11.42□□□□□ -0.58
COL4A6-205ENST00000468338 LUC7L2Q9Y383 392 aaKnown RBP11.42□□□□□ -0.58
COL4A6-205ENST00000468338 ANKRD62A6NC57 917 aa11.41□□□□□ -0.58
COL4A6-205ENST00000468338 CDX4O14627 284 aaPredicted RBP11.41□□□□□ -0.58
COL4A6-205ENST00000468338 MCF2LO15068 1137 aa11.41□□□□□ -0.58
COL4A6-205ENST00000468338 SNAP91O60641 907 aa11.41□□□□□ -0.58
COL4A6-205ENST00000468338 DNTTP04053 509 aa11.41□□□□□ -0.58
COL4A6-205ENST00000468338 MYBL1P10243 752 aa11.41□□□□□ -0.58
COL4A6-205ENST00000468338 SRCP12931 536 aa11.41□□□□□ -0.58
COL4A6-205ENST00000468338 VAV1P15498 845 aa11.41□□□□□ -0.58
COL4A6-205ENST00000468338 CASP14P31944 242 aa11.41□□□□□ -0.58
COL4A6-205ENST00000468338 ACSL1P33121 698 aa11.41□□□□□ -0.58
COL4A6-205ENST00000468338 MAPKAPK2P49137 400 aa11.41□□□□□ -0.58
COL4A6-205ENST00000468338 KRT83P78385 493 aa11.41□□□□□ -0.58
COL4A6-205ENST00000468338 DLG2Q15700 870 aa11.41□□□□□ -0.58
COL4A6-205ENST00000468338 CST6Q15828 149 aa11.41□□□□□ -0.58
COL4A6-205ENST00000468338 TTC31Q49AM3 519 aaPredicted RBP11.41□□□□□ -0.58
COL4A6-205ENST00000468338 TMC6Q7Z403 805 aa11.41□□□□□ -0.58
COL4A6-205ENST00000468338 RABEPKQ7Z6M1 372 aa11.41□□□□□ -0.58
COL4A6-205ENST00000468338 SLFN11Q7Z7L1 901 aa11.41□□□□□ -0.58
COL4A6-205ENST00000468338 CACUL1Q86Y37 369 aa11.41□□□□□ -0.58
COL4A6-205ENST00000468338 STK40Q8N2I9 435 aa11.41□□□□□ -0.58
COL4A6-205ENST00000468338 OR7D4Q8NG98 312 aa11.41□□□□□ -0.58
COL4A6-205ENST00000468338 CEP76Q8TAP6 659 aa11.41□□□□□ -0.58
COL4A6-205ENST00000468338 CPLX3Q8WVH0 158 aa11.41□□□□□ -0.58
COL4A6-205ENST00000468338 TRIM7Q9C029 511 aa11.41□□□□□ -0.58
COL4A6-205ENST00000468338 MUC3BQ9H195 1237 aa11.41□□□□□ -0.58
COL4A6-205ENST00000468338 SGK2Q9HBY8 427 aa11.41□□□□□ -0.58
COL4A6-205ENST00000468338 NDFIP2Q9NV92 336 aa11.41□□□□□ -0.58
COL4A6-205ENST00000468338 TMEM248Q9NWD8 314 aa11.41□□□□□ -0.58
COL4A6-205ENST00000468338 ARHGAP20Q9P2F6 1191 aa11.41□□□□□ -0.58
COL4A6-205ENST00000468338 CNOT8Q9UFF9 292 aaKnown RBP11.41□□□□□ -0.58
COL4A6-205ENST00000468338 SERGEFQ9UGK8 458 aa11.41□□□□□ -0.58
COL4A6-205ENST00000468338 PPM1HQ9ULR3 514 aa11.41□□□□□ -0.58
COL4A6-205ENST00000468338 FZD10Q9ULW2 581 aa11.41□□□□□ -0.58
COL4A6-205ENST00000468338 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.41□□□□□ -0.58
COL4A6-205ENST00000468338 A0A087X0T9 212 aa11.4□□□□□ -0.58
COL4A6-205ENST00000468338 WASH4PA8MWX3 477 aa11.4□□□□□ -0.58
COL4A6-205ENST00000468338 ALOX15BO15296 676 aa11.4□□□□□ -0.58
COL4A6-205ENST00000468338 MID1O15344 667 aa11.4□□□□□ -0.58
COL4A6-205ENST00000468338 RNASEH1O60930 286 aaKnown RBP11.4□□□□□ -0.58
COL4A6-205ENST00000468338 ZNF821O75541 412 aaPredicted RBP11.4□□□□□ -0.58
COL4A6-205ENST00000468338 CD160O95971 181 aa11.4□□□□□ -0.58
COL4A6-205ENST00000468338 TPM3P06753 285 aa11.4□□□□□ -0.58
COL4A6-205ENST00000468338 SERPINF2P08697 491 aa11.4□□□□□ -0.58
COL4A6-205ENST00000468338 FAM228BP0C875 321 aa11.4□□□□□ -0.58
COL4A6-205ENST00000468338 C5AR1P21730 350 aa11.4□□□□□ -0.58
COL4A6-205ENST00000468338 SLC8A1P32418 973 aa11.4□□□□□ -0.58
COL4A6-205ENST00000468338 NUMBP49757 651 aa11.4□□□□□ -0.58
COL4A6-205ENST00000468338 ARF5P84085 180 aa11.4□□□□□ -0.58
COL4A6-205ENST00000468338 GNA12Q03113 381 aa11.4□□□□□ -0.58
COL4A6-205ENST00000468338 SLC20A2Q08357 652 aa11.4□□□□□ -0.58
COL4A6-205ENST00000468338 DUOXA1Q1HG43 343 aa11.4□□□□□ -0.58
COL4A6-205ENST00000468338 AASDHQ4L235 1098 aaPredicted RBP11.4□□□□□ -0.58
COL4A6-205ENST00000468338 TRIM61Q5EBN2 209 aa11.4□□□□□ -0.58
COL4A6-205ENST00000468338 EFHC2Q5JST6 749 aa11.4□□□□□ -0.58
COL4A6-205ENST00000468338 WDR45BQ5MNZ6 344 aa11.4□□□□□ -0.58
COL4A6-205ENST00000468338 SYCP2LQ5T4T6 812 aa11.4□□□□□ -0.58
COL4A6-205ENST00000468338 STPG1Q5TH74 334 aa11.4□□□□□ -0.58
COL4A6-205ENST00000468338 CYP4V2Q6ZWL3 525 aaPredicted RBP11.4□□□□□ -0.58
COL4A6-205ENST00000468338 MMAAQ8IVH4 418 aaKnown RBP11.4□□□□□ -0.58
COL4A6-205ENST00000468338 PYROXD2Q8N2H3 581 aa11.4□□□□□ -0.58
COL4A6-205ENST00000468338 AADATQ8N5Z0 425 aa11.4□□□□□ -0.58
COL4A6-205ENST00000468338 TBC1D31Q96DN5 1066 aa11.4□□□□□ -0.58
COL4A6-205ENST00000468338 TRIM11Q96F44 468 aa11.4□□□□□ -0.58
COL4A6-205ENST00000468338 DNAJC7Q99615 494 aa11.4□□□□□ -0.58
COL4A6-205ENST00000468338 ORAI3Q9BRQ5 295 aa11.4□□□□□ -0.58
COL4A6-205ENST00000468338 BTBD1Q9H0C5 482 aa11.4□□□□□ -0.58
COL4A6-205ENST00000468338 MAGEH1Q9H213 219 aa11.4□□□□□ -0.58
COL4A6-205ENST00000468338 NOL6Q9H6R4 1146 aaKnown RBP11.4□□□□□ -0.58
COL4A6-205ENST00000468338 FBXL12Q9NXK8 326 aa11.4□□□□□ -0.58
COL4A6-205ENST00000468338 SLC25A13Q9UJS0 675 aa11.4□□□□□ -0.58
COL4A6-205ENST00000468338 FZD4Q9ULV1 537 aa11.4□□□□□ -0.58
COL4A6-205ENST00000468338 SLC6A14Q9UN76 642 aa11.4□□□□□ -0.58
COL4A6-205ENST00000468338 ZBTB32Q9Y2Y4 487 aaPredicted RBP11.4□□□□□ -0.58
COL4A6-205ENST00000468338 ATXN2Q99700 1313 aaKnown RBP11.39□□□□□ -0.59
COL4A6-205ENST00000468338 ADAMTS9Q9P2N4 1935 aa11.39□□□□□ -0.59
COL4A6-205ENST00000468338 EIF3CLB5ME19 914 aaKnown RBP11.39□□□□□ -0.59
COL4A6-205ENST00000468338 K7ERQ8 282 aa11.39□□□□□ -0.59
COL4A6-205ENST00000468338 CBFA2T2O43439 604 aa11.39□□□□□ -0.59
COL4A6-205ENST00000468338 SMAD6O43541 496 aaKnown RBP11.39□□□□□ -0.59
COL4A6-205ENST00000468338 SEMA4FO95754 770 aa11.39□□□□□ -0.59
COL4A6-205ENST00000468338 GLDCP23378 1020 aa11.39□□□□□ -0.59
COL4A6-205ENST00000468338 LAMA1P25391 3075 aa11.39□□□□□ -0.59
COL4A6-205ENST00000468338 PSMA2P25787 234 aa11.39□□□□□ -0.59
COL4A6-205ENST00000468338 MAOBP27338 520 aa11.39□□□□□ -0.59
COL4A6-205ENST00000468338 HTR7P34969 479 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms