RNA–Protein interactions for RNA: ENST00000468211.6

PTCH1-210, Transcript of patched 1, humanhuman

TSL 1 (best) BASIC

Gene PTCH1, Length 1,254 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-210ENST00000468211 MAGEB5Q9BZ81 275 aa25.03■■□□□ 1.6
PTCH1-210ENST00000468211 ACTL7AQ9Y615 435 aa25.03■■□□□ 1.6
PTCH1-210ENST00000468211 URB1O60287 2271 aaKnown RBP25.03■■□□□ 1.6
PTCH1-210ENST00000468211 A0A1W2PQU0 124 aa25.02■■□□□ 1.6
PTCH1-210ENST00000468211 ILVBLA1L0T0 632 aa25.02■■□□□ 1.6
PTCH1-210ENST00000468211 PRAMEF26H0Y7S4 382 aa25.02■■□□□ 1.6
PTCH1-210ENST00000468211 GJB6O95452 261 aa25.02■■□□□ 1.6
PTCH1-210ENST00000468211 NUDT1P36639 197 aa25.02■■□□□ 1.6
PTCH1-210ENST00000468211 ACADVLP49748 655 aa25.02■■□□□ 1.6
PTCH1-210ENST00000468211 CLCN6P51797 869 aa25.02■■□□□ 1.6
PTCH1-210ENST00000468211 FMO1Q01740 532 aa25.02■■□□□ 1.6
PTCH1-210ENST00000468211 CYP4F3Q08477 520 aa25.02■■□□□ 1.6
PTCH1-210ENST00000468211 C15orf59Q2T9L4 293 aaPredicted RBP25.02■■□□□ 1.6
PTCH1-210ENST00000468211 CT47A1Q5JQC4 288 aaPredicted RBP25.02■■□□□ 1.6
PTCH1-210ENST00000468211 ARCQ7LC44 396 aa25.02■■□□□ 1.6
PTCH1-210ENST00000468211 TMEM145Q8NBT3 493 aa25.02■■□□□ 1.6
PTCH1-210ENST00000468211 SLC30A5Q8TAD4 765 aa25.02■■□□□ 1.6
PTCH1-210ENST00000468211 ENOX1Q8TC92 643 aaKnown RBP25.02■■□□□ 1.6
PTCH1-210ENST00000468211 ZYG11BQ9C0D3 744 aa25.02■■□□□ 1.6
PTCH1-210ENST00000468211 FZD3Q9NPG1 666 aa25.02■■□□□ 1.6
PTCH1-210ENST00000468211 FARP1Q9Y4F1 1045 aaPredicted RBP25.02■■□□□ 1.6
PTCH1-210ENST00000468211 SDC3O75056 442 aa25.01■■□□□ 1.59
PTCH1-210ENST00000468211 MMP8P22894 467 aa25.01■■□□□ 1.59
PTCH1-210ENST00000468211 JAM2P57087 298 aa25.01■■□□□ 1.59
PTCH1-210ENST00000468211 POLR2FP61218 127 aaKnown RBP25.01■■□□□ 1.59
PTCH1-210ENST00000468211 ARF5P84085 180 aa25.01■■□□□ 1.59
PTCH1-210ENST00000468211 CDR2Q01850 454 aa25.01■■□□□ 1.59
PTCH1-210ENST00000468211 ZNF284Q2VY69 593 aa25.01■■□□□ 1.59
PTCH1-210ENST00000468211 DRC7Q8IY82 874 aa25.01■■□□□ 1.59
PTCH1-210ENST00000468211 OXR1Q8N573 874 aa25.01■■□□□ 1.59
PTCH1-210ENST00000468211 MSANTD4Q8NCY6 345 aa25.01■■□□□ 1.59
PTCH1-210ENST00000468211 JOSD2Q8TAC2 188 aa25.01■■□□□ 1.59
PTCH1-210ENST00000468211 CCDC114Q96M63 670 aa25.01■■□□□ 1.59
PTCH1-210ENST00000468211 NLRC4Q9NPP4 1024 aa25.01■■□□□ 1.59
PTCH1-210ENST00000468211 FAM207AQ9NSI2 230 aaPredicted RBP25.01■■□□□ 1.59
PTCH1-210ENST00000468211 NDFIP2Q9NV92 336 aa25.01■■□□□ 1.59
PTCH1-210ENST00000468211 DKK4Q9UBT3 224 aa25.01■■□□□ 1.59
PTCH1-210ENST00000468211 IL36AQ9UHA7 158 aa25.01■■□□□ 1.59
PTCH1-210ENST00000468211 ZFR2Q9UPR6 939 aaKnown RBP25.01■■□□□ 1.59
PTCH1-210ENST00000468211 PCDHGA1Q9Y5H4 931 aa25.01■■□□□ 1.59
PTCH1-210ENST00000468211 WASF2Q9Y6W5 498 aa25.01■■□□□ 1.59
PTCH1-210ENST00000468211 LEFTY1O75610 366 aa25■■□□□ 1.59
PTCH1-210ENST00000468211 CD160O95971 181 aa25■■□□□ 1.59
PTCH1-210ENST00000468211 PRNPP04156 253 aa25■■□□□ 1.59
PTCH1-210ENST00000468211 SERPINH1P50454 418 aaKnown RBP25■■□□□ 1.59
PTCH1-210ENST00000468211 GNA12Q03113 381 aa25■■□□□ 1.59
PTCH1-210ENST00000468211 OVGP1Q12889 678 aa25■■□□□ 1.59
PTCH1-210ENST00000468211 CDO1Q16878 200 aa25■■□□□ 1.59
PTCH1-210ENST00000468211 CCDC14Q49A88 953 aa25■■□□□ 1.59
PTCH1-210ENST00000468211 ACBD5Q5T8D3 534 aaPredicted RBP25■■□□□ 1.59
PTCH1-210ENST00000468211 ZNF677Q86XU0 584 aa25■■□□□ 1.59
PTCH1-210ENST00000468211 RXFP2Q8WXD0 754 aa25■■□□□ 1.59
PTCH1-210ENST00000468211 KLHDC7BQ96G42 594 aa25■■□□□ 1.59
PTCH1-210ENST00000468211 PCDHB18PQ96TA0 734 aa25■■□□□ 1.59
PTCH1-210ENST00000468211 C11orf70Q9BRQ4 267 aa25■■□□□ 1.59
PTCH1-210ENST00000468211 ATP13A1Q9HD20 1204 aa25■■□□□ 1.59
PTCH1-210ENST00000468211 FAM72CH0Y354 149 aa24.99■■□□□ 1.59
PTCH1-210ENST00000468211 RFPL3O75679 317 aa24.99■■□□□ 1.59
PTCH1-210ENST00000468211 SOX5P35711 763 aa24.99■■□□□ 1.59
PTCH1-210ENST00000468211 ACVRL1P37023 503 aa24.99■■□□□ 1.59
PTCH1-210ENST00000468211 PTP4A2Q12974 167 aa24.99■■□□□ 1.59
PTCH1-210ENST00000468211 FAM72AQ5TYM5 149 aa24.99■■□□□ 1.59
PTCH1-210ENST00000468211 MANEALQ5VSG8 457 aa24.99■■□□□ 1.59
PTCH1-210ENST00000468211 SEL1L3Q68CR1 1132 aa24.99■■□□□ 1.59
PTCH1-210ENST00000468211 FAM72DQ6L9T8 149 aa24.99■■□□□ 1.59
PTCH1-210ENST00000468211 NEK5Q6P3R8 708 aa24.99■■□□□ 1.59
PTCH1-210ENST00000468211 ZNF783Q6ZMS7 281 aa24.99■■□□□ 1.59
PTCH1-210ENST00000468211 CLEC17AQ6ZS10 378 aa24.99■■□□□ 1.59
PTCH1-210ENST00000468211 ERN2Q76MJ5 926 aaKnown RBP24.99■■□□□ 1.59
PTCH1-210ENST00000468211 TMPRSS12Q86WS5 348 aa24.99■■□□□ 1.59
PTCH1-210ENST00000468211 HORMAD1Q86X24 394 aa24.99■■□□□ 1.59
PTCH1-210ENST00000468211 FAM72BQ86X60 149 aa24.99■■□□□ 1.59
PTCH1-210ENST00000468211 GPT2Q8TD30 523 aa24.99■■□□□ 1.59
PTCH1-210ENST00000468211 HDAC8Q9BY41 377 aa24.99■■□□□ 1.59
PTCH1-210ENST00000468211 FANCLQ9NW38 375 aa24.99■■□□□ 1.59
PTCH1-210ENST00000468211 TMEM51Q9NW97 253 aa24.99■■□□□ 1.59
PTCH1-210ENST00000468211 PPARGC1AQ9UBK2 798 aaKnown RBP24.99■■□□□ 1.59
PTCH1-210ENST00000468211 SIK3Q9Y2K2 1263 aa24.99■■□□□ 1.59
PTCH1-210ENST00000468211 FCF1Q9Y324 198 aaKnown RBP24.99■■□□□ 1.59
PTCH1-210ENST00000468211 MAGEC1O60732 1142 aa24.98■■□□□ 1.59
PTCH1-210ENST00000468211 THEGLP0DJG4 465 aa24.98■■□□□ 1.59
PTCH1-210ENST00000468211 ADRA1BP35368 520 aa24.98■■□□□ 1.59
PTCH1-210ENST00000468211 CLDN2P57739 230 aa24.98■■□□□ 1.59
PTCH1-210ENST00000468211 COL28A1Q2UY09 1125 aa24.98■■□□□ 1.59
PTCH1-210ENST00000468211 RETSATQ6NUM9 610 aa24.98■■□□□ 1.59
PTCH1-210ENST00000468211 SLC25A45Q8N413 288 aa24.98■■□□□ 1.59
PTCH1-210ENST00000468211 PDCD7Q8N8D1 485 aaKnown RBP24.98■■□□□ 1.59
PTCH1-210ENST00000468211 OR13H1Q8NG92 308 aa24.98■■□□□ 1.59
PTCH1-210ENST00000468211 DYRK4Q9NR20 520 aa24.98■■□□□ 1.59
PTCH1-210ENST00000468211 OR12D3Q9UGF7 316 aa24.98■■□□□ 1.59
PTCH1-210ENST00000468211 NEU3Q9UQ49 428 aa24.98■■□□□ 1.59
PTCH1-210ENST00000468211 C2CD4BA6NLJ0 364 aa24.97■■□□□ 1.59
PTCH1-210ENST00000468211 TRIM38O00635 465 aa24.97■■□□□ 1.59
PTCH1-210ENST00000468211 PCDH8O95206 1070 aa24.97■■□□□ 1.59
PTCH1-210ENST00000468211 C1SP09871 688 aa24.97■■□□□ 1.59
PTCH1-210ENST00000468211 RECQLP46063 649 aaPredicted RBP24.97■■□□□ 1.59
PTCH1-210ENST00000468211 DNA2P51530 1060 aa24.97■■□□□ 1.59
PTCH1-210ENST00000468211 TMEM259Q4ZIN3 620 aa24.97■■□□□ 1.59
PTCH1-210ENST00000468211 HNRNPLLQ8WVV9 542 aaKnown RBP24.97■■□□□ 1.59
PTCH1-210ENST00000468211 CEP44Q9C0F1 390 aa24.97■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms