RNA–Protein interactions for RNA: ENST00000468179.6

COMMD3-206, Transcript of COMM domain containing 3, humanhuman

TSL 2

Gene COMMD3, Length 1,344 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-206ENST00000468179 SEMA3BQ13214 749 aa14.92□□□□□ -0.02
COMMD3-206ENST00000468179 TRIM14Q14142 442 aa14.92□□□□□ -0.02
COMMD3-206ENST00000468179 SUZ12Q15022 739 aaKnown RBP14.92□□□□□ -0.02
COMMD3-206ENST00000468179 CARD16Q5EG05 197 aa14.92□□□□□ -0.02
COMMD3-206ENST00000468179 ARTNQ5T4W7 220 aa14.92□□□□□ -0.02
COMMD3-206ENST00000468179 FAM72AQ5TYM5 149 aa14.92□□□□□ -0.02
COMMD3-206ENST00000468179 FAM72DQ6L9T8 149 aa14.92□□□□□ -0.02
COMMD3-206ENST00000468179 PSAPL1Q6NUJ1 521 aa14.92□□□□□ -0.02
COMMD3-206ENST00000468179 LINGO4Q6UY18 593 aa14.92□□□□□ -0.02
COMMD3-206ENST00000468179 PRPF39Q86UA1 669 aaKnown RBP14.92□□□□□ -0.02
COMMD3-206ENST00000468179 FAM72BQ86X60 149 aa14.92□□□□□ -0.02
COMMD3-206ENST00000468179 ZNF354CQ86Y25 554 aa14.92□□□□□ -0.02
COMMD3-206ENST00000468179 PLPP6Q8IY26 295 aa14.92□□□□□ -0.02
COMMD3-206ENST00000468179 RTL3Q8N8U3 475 aaKnown RBP14.92□□□□□ -0.02
COMMD3-206ENST00000468179 CASKIN2Q8WXE0 1202 aa14.92□□□□□ -0.02
COMMD3-206ENST00000468179 ARHGEF2Q92974 986 aaKnown RBP14.92□□□□□ -0.02
COMMD3-206ENST00000468179 FAM131CQ96AQ9 280 aa14.92□□□□□ -0.02
COMMD3-206ENST00000468179 ISG20Q96AZ6 181 aaKnown RBP14.92□□□□□ -0.02
COMMD3-206ENST00000468179 ISCUQ9H1K1 167 aa14.92□□□□□ -0.02
COMMD3-206ENST00000468179 TSPY26PQ9H489 355 aa14.92□□□□□ -0.02
COMMD3-206ENST00000468179 TM9SF3Q9HD45 589 aa14.92□□□□□ -0.02
COMMD3-206ENST00000468179 FSCN3Q9NQT6 498 aa14.92□□□□□ -0.02
COMMD3-206ENST00000468179 IL36AQ9UHA7 158 aa14.92□□□□□ -0.02
COMMD3-206ENST00000468179 TNRC6BQ9UPQ9 1833 aaKnown RBP14.91□□□□□ -0.02
COMMD3-206ENST00000468179 WASH4PA8MWX3 477 aa14.91□□□□□ -0.02
COMMD3-206ENST00000468179 K7ERQ8 282 aa14.91□□□□□ -0.02
COMMD3-206ENST00000468179 KPNA3O00505 521 aaPredicted RBP14.91□□□□□ -0.02
COMMD3-206ENST00000468179 SMAD6O43541 496 aaKnown RBP14.91□□□□□ -0.02
COMMD3-206ENST00000468179 PLRG1O43660 514 aaKnown RBP14.91□□□□□ -0.02
COMMD3-206ENST00000468179 KDELR3O43731 214 aa14.91□□□□□ -0.02
COMMD3-206ENST00000468179 PRPSAP2O60256 369 aa14.91□□□□□ -0.02
COMMD3-206ENST00000468179 IGHV4-34P06331 123 aa14.91□□□□□ -0.02
COMMD3-206ENST00000468179 TPM1P09493 284 aa14.91□□□□□ -0.02
COMMD3-206ENST00000468179 ZNF883P0CG24 379 aa14.91□□□□□ -0.02
COMMD3-206ENST00000468179 DRD3P35462 400 aa14.91□□□□□ -0.02
COMMD3-206ENST00000468179 CSNK1EP49674 416 aaKnown RBP14.91□□□□□ -0.02
COMMD3-206ENST00000468179 DNA2P51530 1060 aa14.91□□□□□ -0.02
COMMD3-206ENST00000468179 C21orf59P57076 290 aa14.91□□□□□ -0.02
COMMD3-206ENST00000468179 TSR1Q2NL82 804 aaKnown RBP14.91□□□□□ -0.02
COMMD3-206ENST00000468179 ERMARDQ5T6L9 678 aa14.91□□□□□ -0.02
COMMD3-206ENST00000468179 E4F1Q66K89 784 aaPredicted RBP14.91□□□□□ -0.02
COMMD3-206ENST00000468179 NEK5Q6P3R8 708 aa14.91□□□□□ -0.02
COMMD3-206ENST00000468179 PSTKQ8IV42 348 aaKnown RBP14.91□□□□□ -0.02
COMMD3-206ENST00000468179 HEPHQ9BQS7 1158 aa14.91□□□□□ -0.02
COMMD3-206ENST00000468179 GAREM1Q9H706 876 aa14.91□□□□□ -0.02
COMMD3-206ENST00000468179 PREBQ9HCU5 417 aa14.91□□□□□ -0.02
COMMD3-206ENST00000468179 SARDHQ9UL12 918 aa14.91□□□□□ -0.02
COMMD3-206ENST00000468179 DMTF1Q9Y222 760 aa14.91□□□□□ -0.02
COMMD3-206ENST00000468179 ANKRD6Q9Y2G4 727 aa14.91□□□□□ -0.02
COMMD3-206ENST00000468179 A0A1B0GVT2 93 aa14.9□□□□□ -0.02
COMMD3-206ENST00000468179 DAPK3O43293 454 aa14.9□□□□□ -0.02
COMMD3-206ENST00000468179 GLDCP23378 1020 aa14.9□□□□□ -0.02
COMMD3-206ENST00000468179 ACVRL1P37023 503 aa14.9□□□□□ -0.02
COMMD3-206ENST00000468179 TPI1P60174 286 aa14.9□□□□□ -0.02
COMMD3-206ENST00000468179 ARF5P84085 180 aa14.9□□□□□ -0.02
COMMD3-206ENST00000468179 OGDHQ02218 1023 aa14.9□□□□□ -0.02
COMMD3-206ENST00000468179 CNTN1Q12860 1018 aa14.9□□□□□ -0.02
COMMD3-206ENST00000468179 NFKBIBQ15653 356 aa14.9□□□□□ -0.02
COMMD3-206ENST00000468179 HLA-BQ31612 363 aa14.9□□□□□ -0.02
COMMD3-206ENST00000468179 PARP15Q460N3 678 aa14.9□□□□□ -0.02
COMMD3-206ENST00000468179 N4BP2L1Q5TBK1 243 aaPredicted RBP14.9□□□□□ -0.02
COMMD3-206ENST00000468179 HGSNATQ68CP4 663 aa14.9□□□□□ -0.02
COMMD3-206ENST00000468179 PIP4P1Q86T03 277 aa14.9□□□□□ -0.02
COMMD3-206ENST00000468179 PYROXD2Q8N2H3 581 aa14.9□□□□□ -0.02
COMMD3-206ENST00000468179 LRIG1Q96JA1 1093 aa14.9□□□□□ -0.02
COMMD3-206ENST00000468179 HDAC8Q9BY41 377 aa14.9□□□□□ -0.02
COMMD3-206ENST00000468179 XPO4Q9C0E2 1151 aaKnown RBP14.9□□□□□ -0.02
COMMD3-206ENST00000468179 TNKS2Q9H2K2 1166 aa14.9□□□□□ -0.02
COMMD3-206ENST00000468179 AASDHPPTQ9NRN7 309 aa14.9□□□□□ -0.02
COMMD3-206ENST00000468179 ZNHIT6Q9NWK9 470 aaKnown RBP14.9□□□□□ -0.02
COMMD3-206ENST00000468179 MYO1AQ9UBC5 1043 aa14.9□□□□□ -0.02
COMMD3-206ENST00000468179 AP4E1Q9UPM8 1137 aa14.9□□□□□ -0.02
COMMD3-206ENST00000468179 PCDHB9Q9Y5E1 797 aa14.9□□□□□ -0.02
COMMD3-206ENST00000468179 CEP192Q8TEP8 1941 aa14.89□□□□□ -0.03
COMMD3-206ENST00000468179 EEF2KO00418 725 aaKnown RBP14.89□□□□□ -0.03
COMMD3-206ENST00000468179 VILLO15195 856 aa14.89□□□□□ -0.03
COMMD3-206ENST00000468179 BUB1O43683 1085 aa14.89□□□□□ -0.03
COMMD3-206ENST00000468179 MAGEC1O60732 1142 aa14.89□□□□□ -0.03
COMMD3-206ENST00000468179 GJB3O75712 270 aa14.89□□□□□ -0.03
COMMD3-206ENST00000468179 PCK1P35558 622 aa14.89□□□□□ -0.03
COMMD3-206ENST00000468179 SNRPD1P62314 119 aaKnown RBP14.89□□□□□ -0.03
COMMD3-206ENST00000468179 RAD51Q06609 339 aa14.89□□□□□ -0.03
COMMD3-206ENST00000468179 PIGHQ14442 188 aaPredicted RBP14.89□□□□□ -0.03
COMMD3-206ENST00000468179 INO80DQ53TQ3 878 aaPredicted RBP14.89□□□□□ -0.03
COMMD3-206ENST00000468179 ARSIQ5FYB1 569 aa14.89□□□□□ -0.03
COMMD3-206ENST00000468179 AGBL4Q5VU57 503 aa14.89□□□□□ -0.03
COMMD3-206ENST00000468179 SPECC1LQ69YQ0 1117 aa14.89□□□□□ -0.03
COMMD3-206ENST00000468179 DPY19L3Q6ZPD9 716 aa14.89□□□□□ -0.03
COMMD3-206ENST00000468179 ZSCAN30Q86W11 494 aa14.89□□□□□ -0.03
COMMD3-206ENST00000468179 TRIM69Q86WT6 500 aa14.89□□□□□ -0.03
COMMD3-206ENST00000468179 UMODL1-AS1Q8N2C9 162 aa14.89□□□□□ -0.03
COMMD3-206ENST00000468179 EFCAB3Q8N7B9 438 aa14.89□□□□□ -0.03
COMMD3-206ENST00000468179 DEFB124Q8NES8 71 aa14.89□□□□□ -0.03
COMMD3-206ENST00000468179 RNF25Q96BH1 459 aaPredicted RBP14.89□□□□□ -0.03
COMMD3-206ENST00000468179 SERAC1Q96JX3 654 aa14.89□□□□□ -0.03
COMMD3-206ENST00000468179 MAGEB5Q9BZ81 275 aa14.89□□□□□ -0.03
COMMD3-206ENST00000468179 DHX35Q9H5Z1 703 aaKnown RBP14.89□□□□□ -0.03
COMMD3-206ENST00000468179 NDFIP2Q9NV92 336 aa14.89□□□□□ -0.03
COMMD3-206ENST00000468179 NEU3Q9UQ49 428 aa14.89□□□□□ -0.03
COMMD3-206ENST00000468179 PCDHGB2Q9Y5G2 931 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms