RNA–Protein interactions for RNA: ENST00000467681.5

SSBP1-206, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 2

Gene SSBP1, Length 630 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-206ENST00000467681 A0A0U1RQJ8 604 aa13.87□□□□□ -0.19
SSBP1-206ENST00000467681 LRRD1A4D1F6 860 aa13.87□□□□□ -0.19
SSBP1-206ENST00000467681 J3KR12 359 aa13.87□□□□□ -0.19
SSBP1-206ENST00000467681 DNTTP04053 509 aa13.87□□□□□ -0.19
SSBP1-206ENST00000467681 TNNT1P13805 278 aa13.87□□□□□ -0.19
SSBP1-206ENST00000467681 C5AR1P21730 350 aa13.87□□□□□ -0.19
SSBP1-206ENST00000467681 CD6P30203 668 aa13.87□□□□□ -0.19
SSBP1-206ENST00000467681 CHRNA3P32297 505 aa13.87□□□□□ -0.19
SSBP1-206ENST00000467681 RECQLP46063 649 aaPredicted RBP13.87□□□□□ -0.19
SSBP1-206ENST00000467681 DNA2P51530 1060 aa13.87□□□□□ -0.19
SSBP1-206ENST00000467681 SFSWAPQ12872 951 aaKnown RBP13.87□□□□□ -0.19
SSBP1-206ENST00000467681 CYTH1Q15438 398 aa13.87□□□□□ -0.19
SSBP1-206ENST00000467681 CST6Q15828 149 aa13.87□□□□□ -0.19
SSBP1-206ENST00000467681 IFI16Q16666 785 aaKnown RBP13.87□□□□□ -0.19
SSBP1-206ENST00000467681 SPDYCQ5MJ68 293 aa13.87□□□□□ -0.19
SSBP1-206ENST00000467681 FAM46CQ5VWP2 391 aa13.87□□□□□ -0.19
SSBP1-206ENST00000467681 C22orf39Q6P5X5 142 aa13.87□□□□□ -0.19
SSBP1-206ENST00000467681 DPY19L3Q6ZPD9 716 aa13.87□□□□□ -0.19
SSBP1-206ENST00000467681 ASCL5Q7RTU5 278 aa13.87□□□□□ -0.19
SSBP1-206ENST00000467681 DSG4Q86SJ6 1040 aa13.87□□□□□ -0.19
SSBP1-206ENST00000467681 DAAM2Q86T65 1068 aa13.87□□□□□ -0.19
SSBP1-206ENST00000467681 LRRC49Q8IUZ0 686 aa13.87□□□□□ -0.19
SSBP1-206ENST00000467681 TP53INP2Q8IXH6 220 aa13.87□□□□□ -0.19
SSBP1-206ENST00000467681 PQLC3Q8N755 202 aa13.87□□□□□ -0.19
SSBP1-206ENST00000467681 NETO2Q8NC67 525 aa13.87□□□□□ -0.19
SSBP1-206ENST00000467681 TMIEQ8NEW7 156 aa13.87□□□□□ -0.19
SSBP1-206ENST00000467681 CCDC114Q96M63 670 aa13.87□□□□□ -0.19
SSBP1-206ENST00000467681 RNF157Q96PX1 679 aa13.87□□□□□ -0.19
SSBP1-206ENST00000467681 TNKS2Q9H2K2 1166 aa13.87□□□□□ -0.19
SSBP1-206ENST00000467681 PDFQ9HBH1 243 aa13.87□□□□□ -0.19
SSBP1-206ENST00000467681 CD93Q9NPY3 652 aa13.87□□□□□ -0.19
SSBP1-206ENST00000467681 WSB2Q9NYS7 404 aaPredicted RBP13.87□□□□□ -0.19
SSBP1-206ENST00000467681 IPO11Q9UI26 975 aaKnown RBP13.87□□□□□ -0.19
SSBP1-206ENST00000467681 PRR23AA6NEV1 266 aa13.86□□□□□ -0.19
SSBP1-206ENST00000467681 DFFAO00273 331 aa13.86□□□□□ -0.19
SSBP1-206ENST00000467681 MID1O15344 667 aa13.86□□□□□ -0.19
SSBP1-206ENST00000467681 PSTPIP1O43586 416 aa13.86□□□□□ -0.19
SSBP1-206ENST00000467681 BNIP3LO60238 219 aa13.86□□□□□ -0.19
SSBP1-206ENST00000467681 IL1BP01584 269 aa13.86□□□□□ -0.19
SSBP1-206ENST00000467681 CCZ1BP86790 482 aa13.86□□□□□ -0.19
SSBP1-206ENST00000467681 CCZ1P86791 482 aaPredicted RBP13.86□□□□□ -0.19
SSBP1-206ENST00000467681 IL10RBQ08334 325 aa13.86□□□□□ -0.19
SSBP1-206ENST00000467681 PAFAH1B3Q15102 231 aaKnown RBP13.86□□□□□ -0.19
SSBP1-206ENST00000467681 ELF2Q15723 593 aa13.86□□□□□ -0.19
SSBP1-206ENST00000467681 LPAL2Q16609 132 aa13.86□□□□□ -0.19
SSBP1-206ENST00000467681 TAZQ16635 292 aa13.86□□□□□ -0.19
SSBP1-206ENST00000467681 MYLK3Q32MK0 819 aa13.86□□□□□ -0.19
SSBP1-206ENST00000467681 LAIR1Q6GTX8 287 aa13.86□□□□□ -0.19
SSBP1-206ENST00000467681 ARHGAP36Q6ZRI8 547 aa13.86□□□□□ -0.19
SSBP1-206ENST00000467681 USP30Q70CQ3 517 aa13.86□□□□□ -0.19
SSBP1-206ENST00000467681 LPCAT2Q7L5N7 544 aa13.86□□□□□ -0.19
SSBP1-206ENST00000467681 RCOR2Q8IZ40 523 aa13.86□□□□□ -0.19
SSBP1-206ENST00000467681 RNF10Q8N5U6 811 aaKnown RBP13.86□□□□□ -0.19
SSBP1-206ENST00000467681 LRRC57Q8N9N7 239 aa13.86□□□□□ -0.19
SSBP1-206ENST00000467681 CHST14Q8NCH0 376 aa13.86□□□□□ -0.19
SSBP1-206ENST00000467681 ANP32BQ92688 251 aaKnown RBP13.86□□□□□ -0.19
SSBP1-206ENST00000467681 RNF25Q96BH1 459 aaPredicted RBP13.86□□□□□ -0.19
SSBP1-206ENST00000467681 TOE1Q96GM8 510 aaKnown RBP13.86□□□□□ -0.19
SSBP1-206ENST00000467681 ZNF419Q96HQ0 510 aaPredicted RBP13.86□□□□□ -0.19
SSBP1-206ENST00000467681 HEPHQ9BQS7 1158 aa13.86□□□□□ -0.19
SSBP1-206ENST00000467681 MAK16Q9BXY0 300 aaKnown RBP13.86□□□□□ -0.19
SSBP1-206ENST00000467681 NEUROG2Q9H2A3 272 aa13.86□□□□□ -0.19
SSBP1-206ENST00000467681 FBXL12Q9NXK8 326 aa13.86□□□□□ -0.19
SSBP1-206ENST00000467681 HECAQ9UBI9 543 aaPredicted RBP13.86□□□□□ -0.19
SSBP1-206ENST00000467681 UBA2Q9UBT2 640 aaPredicted RBP13.86□□□□□ -0.19
SSBP1-206ENST00000467681 TRIM10Q9UDY6 481 aa13.86□□□□□ -0.19
SSBP1-206ENST00000467681 SARDHQ9UL12 918 aa13.86□□□□□ -0.19
SSBP1-206ENST00000467681 NCKAP1Q9Y2A7 1128 aa13.86□□□□□ -0.19
SSBP1-206ENST00000467681 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.85□□□□□ -0.19
SSBP1-206ENST00000467681 MACROD2A1Z1Q3 448 aa13.85□□□□□ -0.19
SSBP1-206ENST00000467681 GRID2IPA4D2P6 1211 aa13.85□□□□□ -0.19
SSBP1-206ENST00000467681 NRDCO43847 1150 aa13.85□□□□□ -0.19
SSBP1-206ENST00000467681 NDUFS2O75306 463 aa13.85□□□□□ -0.19
SSBP1-206ENST00000467681 TMCC1O94876 653 aa13.85□□□□□ -0.19
SSBP1-206ENST00000467681 ZRANB2O95218 330 aaKnown RBP eCLIP13.85□□□□□ -0.19
SSBP1-206ENST00000467681 POP4O95707 220 aaKnown RBP13.85□□□□□ -0.19
SSBP1-206ENST00000467681 ADH1BP00325 375 aa13.85□□□□□ -0.19
SSBP1-206ENST00000467681 GSRP00390 522 aa13.85□□□□□ -0.19
SSBP1-206ENST00000467681 PRNPP04156 253 aa13.85□□□□□ -0.19
SSBP1-206ENST00000467681 KRT1P04264 644 aa13.85□□□□□ -0.19
SSBP1-206ENST00000467681 CTSLP07711 333 aa13.85□□□□□ -0.19
SSBP1-206ENST00000467681 RETP07949 1114 aa13.85□□□□□ -0.19
SSBP1-206ENST00000467681 SERPINB6P35237 376 aa13.85□□□□□ -0.19
SSBP1-206ENST00000467681 PSMD8P48556 350 aa13.85□□□□□ -0.19
SSBP1-206ENST00000467681 SNRPD1P62314 119 aaKnown RBP13.85□□□□□ -0.19
SSBP1-206ENST00000467681 GSE1Q14687 1217 aa13.85□□□□□ -0.19
SSBP1-206ENST00000467681 RFTN1Q14699 578 aaPredicted RBP13.85□□□□□ -0.19
SSBP1-206ENST00000467681 TTC31Q49AM3 519 aaPredicted RBP13.85□□□□□ -0.19
SSBP1-206ENST00000467681 ARSIQ5FYB1 569 aa13.85□□□□□ -0.19
SSBP1-206ENST00000467681 PMS2CLQ68D20 193 aa13.85□□□□□ -0.19
SSBP1-206ENST00000467681 ZNF662Q6ZS27 426 aa13.85□□□□□ -0.19
SSBP1-206ENST00000467681 CACUL1Q86Y37 369 aa13.85□□□□□ -0.19
SSBP1-206ENST00000467681 TMEFF1Q8IYR6 380 aa13.85□□□□□ -0.19
SSBP1-206ENST00000467681 KATNAL2Q8IYT4 538 aa13.85□□□□□ -0.19
SSBP1-206ENST00000467681 PIP4K2CQ8TBX8 421 aa13.85□□□□□ -0.19
SSBP1-206ENST00000467681 GANCQ8TET4 914 aa13.85□□□□□ -0.19
SSBP1-206ENST00000467681 SGK2Q9HBY8 427 aa13.85□□□□□ -0.19
SSBP1-206ENST00000467681 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.85□□□□□ -0.19
SSBP1-206ENST00000467681 PCDHA3Q9Y5H8 950 aa13.85□□□□□ -0.19
SSBP1-206ENST00000467681 EML5Q05BV3 1969 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms