RNA–Protein interactions for RNA: ENST00000467560.5

ATPAF2-204, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

TSL 2

Gene ATPAF2, Length 567 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2-204ENST00000467560 LIMA1Q9UHB6 759 aaKnown RBP15.1■□□□□ 0.01
ATPAF2-204ENST00000467560 WASF2Q9Y6W5 498 aa15.1■□□□□ 0.01
ATPAF2-204ENST00000467560 IGSF10Q6WRI0 2623 aa15.1■□□□□ 0.01
ATPAF2-204ENST00000467560 ARID1BQ8NFD5 2236 aaPredicted RBP15.09■□□□□ 0.01
ATPAF2-204ENST00000467560 A0A1W2PQU0 124 aa15.09■□□□□ 0.01
ATPAF2-204ENST00000467560 ILVBLA1L0T0 632 aa15.09■□□□□ 0.01
ATPAF2-204ENST00000467560 DFNA5O60443 496 aa15.09■□□□□ 0.01
ATPAF2-204ENST00000467560 ADRA1BP35368 520 aa15.09■□□□□ 0.01
ATPAF2-204ENST00000467560 HDAC4P56524 1084 aa15.09■□□□□ 0.01
ATPAF2-204ENST00000467560 NCAPHQ15003 741 aa15.09■□□□□ 0.01
ATPAF2-204ENST00000467560 DHRS13Q6UX07 377 aa15.09■□□□□ 0.01
ATPAF2-204ENST00000467560 PRPF39Q86UA1 669 aaKnown RBP15.09■□□□□ 0.01
ATPAF2-204ENST00000467560 NLRP14Q86W24 1093 aa15.09■□□□□ 0.01
ATPAF2-204ENST00000467560 EID2Q8N6I1 236 aa15.09■□□□□ 0.01
ATPAF2-204ENST00000467560 CCDC185Q8N715 623 aa15.09■□□□□ 0.01
ATPAF2-204ENST00000467560 MFSD2AQ8NA29 543 aa15.09■□□□□ 0.01
ATPAF2-204ENST00000467560 TMEM145Q8NBT3 493 aa15.09■□□□□ 0.01
ATPAF2-204ENST00000467560 TMIEQ8NEW7 156 aa15.09■□□□□ 0.01
ATPAF2-204ENST00000467560 CENPIQ92674 756 aaPredicted RBP15.09■□□□□ 0.01
ATPAF2-204ENST00000467560 ZYG11BQ9C0D3 744 aa15.09■□□□□ 0.01
ATPAF2-204ENST00000467560 KDM4CQ9H3R0 1056 aa15.09■□□□□ 0.01
ATPAF2-204ENST00000467560 ATP13A1Q9HD20 1204 aa15.09■□□□□ 0.01
ATPAF2-204ENST00000467560 FZD3Q9NPG1 666 aa15.09■□□□□ 0.01
ATPAF2-204ENST00000467560 FTSJ1Q9UET6 329 aa15.09■□□□□ 0.01
ATPAF2-204ENST00000467560 ZFR2Q9UPR6 939 aaKnown RBP15.09■□□□□ 0.01
ATPAF2-204ENST00000467560 FCF1Q9Y324 198 aaKnown RBP15.09■□□□□ 0.01
ATPAF2-204ENST00000467560 PAXBP1Q9Y5B6 917 aa15.09■□□□□ 0.01
ATPAF2-204ENST00000467560 DOCK4Q8N1I0 1966 aa15.09■□□□□ 0.01
ATPAF2-204ENST00000467560 ATRXP46100 2492 aa15.08■□□□□ 0.01
ATPAF2-204ENST00000467560 SMG1Q96Q15 3661 aaKnown RBP15.08■□□□□ 0
ATPAF2-204ENST00000467560 LGALS16A8MUM7 142 aa15.08■□□□□ 0
ATPAF2-204ENST00000467560 SLC31A1O15431 190 aa15.08■□□□□ 0
ATPAF2-204ENST00000467560 LEFTY1O75610 366 aa15.08■□□□□ 0
ATPAF2-204ENST00000467560 ITGAVP06756 1048 aa15.08■□□□□ 0
ATPAF2-204ENST00000467560 GKP32189 559 aa15.08■□□□□ 0
ATPAF2-204ENST00000467560 RFC1P35251 1148 aaPredicted RBP15.08■□□□□ 0
ATPAF2-204ENST00000467560 STAT1P42224 750 aa15.08■□□□□ 0
ATPAF2-204ENST00000467560 RXRGP48443 463 aa15.08■□□□□ 0
ATPAF2-204ENST00000467560 SERPINH1P50454 418 aaKnown RBP15.08■□□□□ 0
ATPAF2-204ENST00000467560 CLCN6P51797 869 aa15.08■□□□□ 0
ATPAF2-204ENST00000467560 GNA12Q03113 381 aa15.08■□□□□ 0
ATPAF2-204ENST00000467560 CAMK2BQ13554 666 aa15.08■□□□□ 0
ATPAF2-204ENST00000467560 SMAD1Q15797 465 aaKnown RBP15.08■□□□□ 0
ATPAF2-204ENST00000467560 CLEC16AQ2KHT3 1053 aa15.08■□□□□ 0
ATPAF2-204ENST00000467560 ZNF284Q2VY69 593 aa15.08■□□□□ 0
ATPAF2-204ENST00000467560 FKBP15Q5T1M5 1219 aa15.08■□□□□ 0
ATPAF2-204ENST00000467560 SFMBT2Q5VUG0 894 aa15.08■□□□□ 0
ATPAF2-204ENST00000467560 SEL1L3Q68CR1 1132 aa15.08■□□□□ 0
ATPAF2-204ENST00000467560 LEKR1Q6ZMV7 388 aa15.08■□□□□ 0
ATPAF2-204ENST00000467560 MSANTD4Q8NCY6 345 aa15.08■□□□□ 0
ATPAF2-204ENST00000467560 PREBQ9HCU5 417 aa15.08■□□□□ 0
ATPAF2-204ENST00000467560 PPARGC1AQ9UBK2 798 aaKnown RBP15.08■□□□□ 0
ATPAF2-204ENST00000467560 OR12D3Q9UGF7 316 aa15.08■□□□□ 0
ATPAF2-204ENST00000467560 IL36AQ9UHA7 158 aa15.08■□□□□ 0
ATPAF2-204ENST00000467560 TCRBV5S1A1TA0A578 114 aa15.07■□□□□ 0
ATPAF2-204ENST00000467560 SDC3O75056 442 aa15.07■□□□□ 0
ATPAF2-204ENST00000467560 ATP1A3P13637 1013 aa15.07■□□□□ 0
ATPAF2-204ENST00000467560 SDC4P31431 198 aa15.07■□□□□ 0
ATPAF2-204ENST00000467560 PTPN9P43378 593 aa15.07■□□□□ 0
ATPAF2-204ENST00000467560 MYL5Q02045 173 aa15.07■□□□□ 0
ATPAF2-204ENST00000467560 FGL2Q14314 439 aa15.07■□□□□ 0
ATPAF2-204ENST00000467560 ZNF783Q6ZMS7 281 aa15.07■□□□□ 0
ATPAF2-204ENST00000467560 PYROXD2Q8N2H3 581 aa15.07■□□□□ 0
ATPAF2-204ENST00000467560 NETO2Q8NC67 525 aa15.07■□□□□ 0
ATPAF2-204ENST00000467560 FAM172AQ8WUF8 416 aa15.07■□□□□ 0
ATPAF2-204ENST00000467560 SKA1Q96BD8 255 aa15.07■□□□□ 0
ATPAF2-204ENST00000467560 CNDP2Q96KP4 475 aaKnown RBP15.07■□□□□ 0
ATPAF2-204ENST00000467560 GBP4Q96PP9 640 aa15.07■□□□□ 0
ATPAF2-204ENST00000467560 ERVMER34-1Q9H9K5 563 aa15.07■□□□□ 0
ATPAF2-204ENST00000467560 ADAM22Q9P0K1 906 aa15.07■□□□□ 0
ATPAF2-204ENST00000467560 DNAI1Q9UI46 699 aa15.07■□□□□ 0
ATPAF2-204ENST00000467560 TPX2Q9ULW0 747 aaKnown RBP15.07■□□□□ 0
ATPAF2-204ENST00000467560 DMTF1Q9Y222 760 aa15.07■□□□□ 0
ATPAF2-204ENST00000467560 KNTC1P50748 2209 aa15.07■□□□□ 0
ATPAF2-204ENST00000467560 LRRC10BA6NIK2 292 aa15.06■□□□□ 0
ATPAF2-204ENST00000467560 PRAMEF26H0Y7S4 382 aa15.06■□□□□ 0
ATPAF2-204ENST00000467560 ENC1O14682 589 aa15.06■□□□□ 0
ATPAF2-204ENST00000467560 LRIG2O94898 1065 aa15.06■□□□□ 0
ATPAF2-204ENST00000467560 LDOC1O95751 146 aaPredicted RBP15.06■□□□□ 0
ATPAF2-204ENST00000467560 PRNPP04156 253 aa15.06■□□□□ 0
ATPAF2-204ENST00000467560 ARRB1P49407 418 aaPredicted RBP15.06■□□□□ 0
ATPAF2-204ENST00000467560 DNA2P51530 1060 aa15.06■□□□□ 0
ATPAF2-204ENST00000467560 CCNHP51946 323 aaPredicted RBP15.06■□□□□ 0
ATPAF2-204ENST00000467560 CLDN2P57739 230 aa15.06■□□□□ 0
ATPAF2-204ENST00000467560 NRG1Q02297 640 aaPredicted RBP15.06■□□□□ 0
ATPAF2-204ENST00000467560 STAT4Q14765 748 aa15.06■□□□□ 0
ATPAF2-204ENST00000467560 SETMARQ53H47 684 aaPredicted RBP15.06■□□□□ 0
ATPAF2-204ENST00000467560 SLC45A4Q5BKX6 768 aa15.06■□□□□ 0
ATPAF2-204ENST00000467560 CARD16Q5EG05 197 aa15.06■□□□□ 0
ATPAF2-204ENST00000467560 ACBD5Q5T8D3 534 aaPredicted RBP15.06■□□□□ 0
ATPAF2-204ENST00000467560 RWDD4Q6NW29 188 aaKnown RBP15.06■□□□□ 0
ATPAF2-204ENST00000467560 WDR59Q6PJI9 974 aa15.06■□□□□ 0
ATPAF2-204ENST00000467560 KDM7AQ6ZMT4 941 aa15.06■□□□□ 0
ATPAF2-204ENST00000467560 ERN2Q76MJ5 926 aaKnown RBP15.06■□□□□ 0
ATPAF2-204ENST00000467560 MON1BQ7L1V2 547 aa15.06■□□□□ 0
ATPAF2-204ENST00000467560 IQCHQ86VS3 1027 aa15.06■□□□□ 0
ATPAF2-204ENST00000467560 HORMAD1Q86X24 394 aa15.06■□□□□ 0
ATPAF2-204ENST00000467560 PHF13Q86YI8 300 aaPredicted RBP15.06■□□□□ 0
ATPAF2-204ENST00000467560 SLC22A18ASQ8N1D0 253 aa15.06■□□□□ 0
ATPAF2-204ENST00000467560 SLC25A45Q8N413 288 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms