RNA–Protein interactions for RNA: ENST00000466854.5

CCDC58-203, Transcript of coiled-coil domain containing 58, humanhuman

TSL 3

Gene CCDC58, Length 769 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-203ENST00000466854 TMCC3Q9ULS5 477 aa3.91□□□□□ -1.78
CCDC58-203ENST00000466854 LAMP3Q9UQV4 416 aa3.91□□□□□ -1.78
CCDC58-203ENST00000466854 GTPBP10A4D1E9 387 aaKnown RBP3.9□□□□□ -1.79
CCDC58-203ENST00000466854 CXorf65A6NEN9 183 aa3.9□□□□□ -1.79
CCDC58-203ENST00000466854 TRIM64CA6NLI5 447 aa3.9□□□□□ -1.79
CCDC58-203ENST00000466854 SYT5O00445 386 aa3.9□□□□□ -1.79
CCDC58-203ENST00000466854 ACKR2O00590 384 aa3.9□□□□□ -1.79
CCDC58-203ENST00000466854 MSI1O43347 362 aaKnown RBP3.9□□□□□ -1.79
CCDC58-203ENST00000466854 TLX3O43711 291 aaPredicted RBP3.9□□□□□ -1.79
CCDC58-203ENST00000466854 HMMRO75330 724 aa3.9□□□□□ -1.79
CCDC58-203ENST00000466854 NDUFB8O95169 186 aa3.9□□□□□ -1.79
CCDC58-203ENST00000466854 EPN2O95208 641 aa3.9□□□□□ -1.79
CCDC58-203ENST00000466854 SGPL1O95470 568 aa3.9□□□□□ -1.79
CCDC58-203ENST00000466854 CYP3A4P08684 503 aa3.9□□□□□ -1.79
CCDC58-203ENST00000466854 ADD2P35612 726 aa3.9□□□□□ -1.79
CCDC58-203ENST00000466854 UBA7P41226 1012 aa3.9□□□□□ -1.79
CCDC58-203ENST00000466854 PIK3CAP42336 1068 aa3.9□□□□□ -1.79
CCDC58-203ENST00000466854 CDKN2AP42771 156 aaKnown RBP3.9□□□□□ -1.79
CCDC58-203ENST00000466854 FOXL2P58012 376 aa3.9□□□□□ -1.79
CCDC58-203ENST00000466854 BPIFB3P59826 476 aa3.9□□□□□ -1.79
CCDC58-203ENST00000466854 PGM5Q15124 567 aa3.9□□□□□ -1.79
CCDC58-203ENST00000466854 SMTNL2Q2TAL5 461 aa3.9□□□□□ -1.79
CCDC58-203ENST00000466854 PRTGQ2VWP7 1150 aa3.9□□□□□ -1.79
CCDC58-203ENST00000466854 CCDC129Q6ZRS4 1044 aa3.9□□□□□ -1.79
CCDC58-203ENST00000466854 MAATS1Q7Z4T9 603 aa3.9□□□□□ -1.79
CCDC58-203ENST00000466854 GALNT5Q7Z7M9 940 aa3.9□□□□□ -1.79
CCDC58-203ENST00000466854 SLC44A2Q8IWA5 706 aaPredicted RBP3.9□□□□□ -1.79
CCDC58-203ENST00000466854 HSCBQ8IWL3 235 aa3.9□□□□□ -1.79
CCDC58-203ENST00000466854 B4GALNT2Q8NHY0 566 aa3.9□□□□□ -1.79
CCDC58-203ENST00000466854 ZFPM2Q8WW38 1151 aa3.9□□□□□ -1.79
CCDC58-203ENST00000466854 CPT1BQ92523 772 aa3.9□□□□□ -1.79
CCDC58-203ENST00000466854 IP6K1Q92551 441 aa3.9□□□□□ -1.79
CCDC58-203ENST00000466854 CENPIQ92674 756 aaPredicted RBP3.9□□□□□ -1.79
CCDC58-203ENST00000466854 RSC1A1Q92681 617 aa3.9□□□□□ -1.79
CCDC58-203ENST00000466854 KCNJ9Q92806 393 aa3.9□□□□□ -1.79
CCDC58-203ENST00000466854 EME1Q96AY2 570 aa3.9□□□□□ -1.79
CCDC58-203ENST00000466854 HVCN1Q96D96 273 aa3.9□□□□□ -1.79
CCDC58-203ENST00000466854 EID2BQ96D98 161 aa3.9□□□□□ -1.79
CCDC58-203ENST00000466854 ZNF419Q96HQ0 510 aaPredicted RBP3.9□□□□□ -1.79
CCDC58-203ENST00000466854 PIMREGQ9BSJ6 248 aa3.9□□□□□ -1.79
CCDC58-203ENST00000466854 XPO4Q9C0E2 1151 aaKnown RBP3.9□□□□□ -1.79
CCDC58-203ENST00000466854 TAF1DQ9H5J8 278 aaPredicted RBP3.9□□□□□ -1.79
CCDC58-203ENST00000466854 THSD1Q9NS62 852 aa3.9□□□□□ -1.79
CCDC58-203ENST00000466854 MSRB1Q9NZV6 116 aa3.9□□□□□ -1.79
CCDC58-203ENST00000466854 FRMD4AQ9P2Q2 1039 aaPredicted RBP3.9□□□□□ -1.79
CCDC58-203ENST00000466854 SLC25A13Q9UJS0 675 aa3.9□□□□□ -1.79
CCDC58-203ENST00000466854 ZNF112Q9UJU3 913 aa3.9□□□□□ -1.79
CCDC58-203ENST00000466854 DAPP1Q9UN19 280 aa3.9□□□□□ -1.79
CCDC58-203ENST00000466854 COPG1Q9Y678 874 aaKnown RBP3.9□□□□□ -1.79
CCDC58-203ENST00000466854 WDR7Q9Y4E6 1490 aa3.9□□□□□ -1.79
CCDC58-203ENST00000466854 KDM5BQ9UGL1 1544 aa3.9□□□□□ -1.79
CCDC58-203ENST00000466854 BIVM-ERCC5R4GMW8 1640 aa3.89□□□□□ -1.79
CCDC58-203ENST00000466854 TRBV5-3A0A0A0MS03 114 aa3.89□□□□□ -1.79
CCDC58-203ENST00000466854 A0A0G2JK05 382 aa3.89□□□□□ -1.79
CCDC58-203ENST00000466854 KIR2DS5A0A0G2JLQ3 304 aa3.89□□□□□ -1.79
CCDC58-203ENST00000466854 TMEM272A0A1B0GTI8 110 aa3.89□□□□□ -1.79
CCDC58-203ENST00000466854 FAM90A18PA6NE21 464 aa3.89□□□□□ -1.79
CCDC58-203ENST00000466854 FAM90A16PA6NEW6 464 aa3.89□□□□□ -1.79
CCDC58-203ENST00000466854 FAM90A9PA6NNJ1 464 aa3.89□□□□□ -1.79
CCDC58-203ENST00000466854 FAM90A5PA8MXJ8 464 aa3.89□□□□□ -1.79
CCDC58-203ENST00000466854 K7ENM7 598 aa3.89□□□□□ -1.79
CCDC58-203ENST00000466854 KIR2DS3K7RE56 304 aa3.89□□□□□ -1.79
CCDC58-203ENST00000466854 KRT38O76015 456 aa3.89□□□□□ -1.79
CCDC58-203ENST00000466854 FAM90A15PP0C7V4 464 aa3.89□□□□□ -1.79
CCDC58-203ENST00000466854 FAM90A14PP0C7W9 464 aa3.89□□□□□ -1.79
CCDC58-203ENST00000466854 CHRNB1P11230 501 aa3.89□□□□□ -1.79
CCDC58-203ENST00000466854 SERPINA4P29622 427 aa3.89□□□□□ -1.79
CCDC58-203ENST00000466854 CHKAP35790 457 aa3.89□□□□□ -1.79
CCDC58-203ENST00000466854 ZNF132P52740 706 aa3.89□□□□□ -1.79
CCDC58-203ENST00000466854 KRT83P78385 493 aa3.89□□□□□ -1.79
CCDC58-203ENST00000466854 TBX2Q13207 712 aaPredicted RBP3.89□□□□□ -1.79
CCDC58-203ENST00000466854 PDCLQ13371 301 aa3.89□□□□□ -1.79
CCDC58-203ENST00000466854 ODF3L2Q3SX64 289 aa3.89□□□□□ -1.79
CCDC58-203ENST00000466854 C6orf10Q5SRN2 563 aa3.89□□□□□ -1.79
CCDC58-203ENST00000466854 KIAA1324Q6UXG2 1013 aaKnown RBP3.89□□□□□ -1.79
CCDC58-203ENST00000466854 LDHAL6AQ6ZMR3 332 aa3.89□□□□□ -1.79
CCDC58-203ENST00000466854 ANKS1BQ7Z6G8 1248 aa3.89□□□□□ -1.79
CCDC58-203ENST00000466854 TBC1D1Q86TI0 1168 aaPredicted RBP3.89□□□□□ -1.79
CCDC58-203ENST00000466854 SNX32Q86XE0 403 aa3.89□□□□□ -1.79
CCDC58-203ENST00000466854 OR52N4Q8NGI2 321 aa3.89□□□□□ -1.79
CCDC58-203ENST00000466854 SH3KBP1Q96B97 665 aa3.89□□□□□ -1.79
CCDC58-203ENST00000466854 MSI2Q96DH6 328 aaKnown RBP3.89□□□□□ -1.79
CCDC58-203ENST00000466854 THOC3Q96J01 351 aaKnown RBP3.89□□□□□ -1.79
CCDC58-203ENST00000466854 PPM1MQ96MI6 270 aa3.89□□□□□ -1.79
CCDC58-203ENST00000466854 SCLT1Q96NL6 688 aa3.89□□□□□ -1.79
CCDC58-203ENST00000466854 EIF2AK1Q9BQI3 630 aaKnown RBP3.89□□□□□ -1.79
CCDC58-203ENST00000466854 PABPC3Q9H361 631 aaKnown RBP3.89□□□□□ -1.79
CCDC58-203ENST00000466854 PDE11AQ9HCR9 933 aa3.89□□□□□ -1.79
CCDC58-203ENST00000466854 BLOC1S4Q9NUP1 217 aa3.89□□□□□ -1.79
CCDC58-203ENST00000466854 ARL15Q9NXU5 204 aa3.89□□□□□ -1.79
CCDC58-203ENST00000466854 GJD2Q9UKL4 321 aa3.89□□□□□ -1.79
CCDC58-203ENST00000466854 AGO2Q9UKV8 859 aaKnown RBP3.89□□□□□ -1.79
CCDC58-203ENST00000466854 PCDHA12Q9UN75 941 aa3.89□□□□□ -1.79
CCDC58-203ENST00000466854 PROCRQ9UNN8 238 aa3.89□□□□□ -1.79
CCDC58-203ENST00000466854 C19orf53Q9UNZ5 99 aaPredicted RBP3.89□□□□□ -1.79
CCDC58-203ENST00000466854 GPR52Q9Y2T5 361 aa3.89□□□□□ -1.79
CCDC58-203ENST00000466854 ZNF335Q9H4Z2 1342 aaPredicted RBP3.89□□□□□ -1.79
CCDC58-203ENST00000466854 C3P01024 1663 aa3.88□□□□□ -1.79
CCDC58-203ENST00000466854 FANCAO15360 1455 aa3.88□□□□□ -1.79
CCDC58-203ENST00000466854 CYP3A7-CYP3A51PA0A087WV96 503 aa3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms