RNA–Protein interactions for RNA: ENST00000466471.1

SORT1-202, Transcript of sortilin 1, humanhuman

TSL 2

Gene SORT1, Length 521 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-202ENST00000466471 MAGEA1P43355 309 aa3.59□□□□□ -1.83
SORT1-202ENST00000466471 RAP1GAPP47736 663 aa3.59□□□□□ -1.83
SORT1-202ENST00000466471 PAPOLAP51003 745 aaKnown RBP3.59□□□□□ -1.83
SORT1-202ENST00000466471 PDE6CP51160 858 aa3.59□□□□□ -1.83
SORT1-202ENST00000466471 ARFIP2P53365 341 aa3.59□□□□□ -1.83
SORT1-202ENST00000466471 HADHBP55084 474 aaKnown RBP3.59□□□□□ -1.83
SORT1-202ENST00000466471 RPL26P61254 145 aaKnown RBP3.59□□□□□ -1.83
SORT1-202ENST00000466471 NCALDP61601 193 aa3.59□□□□□ -1.83
SORT1-202ENST00000466471 TIMM10P62072 90 aa3.59□□□□□ -1.83
SORT1-202ENST00000466471 MRPS25P82663 173 aaKnown RBP3.59□□□□□ -1.83
SORT1-202ENST00000466471 LRRC63Q05C16 580 aa3.59□□□□□ -1.83
SORT1-202ENST00000466471 PPP3CAQ08209 521 aa3.59□□□□□ -1.83
SORT1-202ENST00000466471 C2orf54Q08AI8 447 aa3.59□□□□□ -1.83
SORT1-202ENST00000466471 TROAPQ12815 778 aa3.59□□□□□ -1.83
SORT1-202ENST00000466471 IKZF1Q13422 519 aa3.59□□□□□ -1.83
SORT1-202ENST00000466471 PMS2P11Q13670 270 aa3.59□□□□□ -1.83
SORT1-202ENST00000466471 GRB14Q14449 540 aa3.59□□□□□ -1.83
SORT1-202ENST00000466471 RASA2Q15283 850 aa3.59□□□□□ -1.83
SORT1-202ENST00000466471 IL17AQ16552 155 aa3.59□□□□□ -1.83
SORT1-202ENST00000466471 SLC18A3Q16572 532 aa3.59□□□□□ -1.83
SORT1-202ENST00000466471 PFKFB4Q16877 469 aa3.59□□□□□ -1.83
SORT1-202ENST00000466471 CCDC96Q2M329 555 aa3.59□□□□□ -1.83
SORT1-202ENST00000466471 FAM153CQ494X1 144 aa3.59□□□□□ -1.83
SORT1-202ENST00000466471 ACCSLQ4AC99 568 aa3.59□□□□□ -1.83
SORT1-202ENST00000466471 CCDC152Q4G0S7 254 aa3.59□□□□□ -1.83
SORT1-202ENST00000466471 VWA3BQ502W6 1294 aa3.59□□□□□ -1.83
SORT1-202ENST00000466471 C19orf54Q5BKX5 351 aa3.59□□□□□ -1.83
SORT1-202ENST00000466471 TCEAL5Q5H9L2 206 aa3.59□□□□□ -1.83
SORT1-202ENST00000466471 WASHC2DQ5SRD0 308 aa3.59□□□□□ -1.83
SORT1-202ENST00000466471 FYB2Q5VWT5 728 aa3.59□□□□□ -1.83
SORT1-202ENST00000466471 NUGGCQ68CJ6 796 aa3.59□□□□□ -1.83
SORT1-202ENST00000466471 PDXDC1Q6P996 788 aa3.59□□□□□ -1.83
SORT1-202ENST00000466471 SLC30A9Q6PML9 568 aa3.59□□□□□ -1.83
SORT1-202ENST00000466471 USP17L6PQ6QN14 398 aa3.59□□□□□ -1.83
SORT1-202ENST00000466471 LMBR1LQ6UX01 489 aa3.59□□□□□ -1.83
SORT1-202ENST00000466471 UNC13DQ70J99 1090 aa3.59□□□□□ -1.83
SORT1-202ENST00000466471 CXXC5Q7LFL8 322 aaKnown RBP3.59□□□□□ -1.83
SORT1-202ENST00000466471 CHST3Q7LGC8 479 aa3.59□□□□□ -1.83
SORT1-202ENST00000466471 HOOK3Q86VS8 718 aa3.59□□□□□ -1.83
SORT1-202ENST00000466471 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP3.59□□□□□ -1.83
SORT1-202ENST00000466471 ARHGAP18Q8N392 663 aa3.59□□□□□ -1.83
SORT1-202ENST00000466471 GUF1Q8N442 669 aaKnown RBP3.59□□□□□ -1.83
SORT1-202ENST00000466471 SH2D3CQ8N5H7 860 aa3.59□□□□□ -1.83
SORT1-202ENST00000466471 CCDC33Q8N5R6 958 aa3.59□□□□□ -1.83
SORT1-202ENST00000466471 PCYOX1LQ8NBM8 494 aa3.59□□□□□ -1.83
SORT1-202ENST00000466471 GPRC5AQ8NFJ5 357 aa3.59□□□□□ -1.83
SORT1-202ENST00000466471 NUP133Q8WUM0 1156 aa3.59□□□□□ -1.83
SORT1-202ENST00000466471 LPIN2Q92539 896 aa3.59□□□□□ -1.83
SORT1-202ENST00000466471 INPP5DQ92835 1189 aa3.59□□□□□ -1.83
SORT1-202ENST00000466471 P2RX5Q93086 422 aa3.59□□□□□ -1.83
SORT1-202ENST00000466471 ZNF566Q969W8 418 aa3.59□□□□□ -1.83
SORT1-202ENST00000466471 TBC1D31Q96DN5 1066 aa3.59□□□□□ -1.83
SORT1-202ENST00000466471 SPDL1Q96EA4 605 aa3.59□□□□□ -1.83
SORT1-202ENST00000466471 FAM89AQ96GI7 184 aa3.59□□□□□ -1.83
SORT1-202ENST00000466471 NAF1Q96HR8 494 aaKnown RBP3.59□□□□□ -1.83
SORT1-202ENST00000466471 MRGPRX4Q96LA9 322 aa3.59□□□□□ -1.83
SORT1-202ENST00000466471 TGS1Q96RS0 853 aaKnown RBP3.59□□□□□ -1.83
SORT1-202ENST00000466471 BTBD2Q9BX70 525 aa3.59□□□□□ -1.83
SORT1-202ENST00000466471 IFIH1Q9BYX4 1025 aaKnown RBP3.59□□□□□ -1.83
SORT1-202ENST00000466471 RAB17Q9H0T7 212 aa3.59□□□□□ -1.83
SORT1-202ENST00000466471 VPS16Q9H269 839 aa3.59□□□□□ -1.83
SORT1-202ENST00000466471 HIPK3Q9H422 1215 aa3.59□□□□□ -1.83
SORT1-202ENST00000466471 RXFP1Q9HBX9 757 aa3.59□□□□□ -1.83
SORT1-202ENST00000466471 EPB41L5Q9HCM4 733 aa3.59□□□□□ -1.83
SORT1-202ENST00000466471 UBN1Q9NPG3 1134 aa3.59□□□□□ -1.83
SORT1-202ENST00000466471 RIC8AQ9NPQ8 531 aa3.59□□□□□ -1.83
SORT1-202ENST00000466471 XPNPEP3Q9NQH7 507 aa3.59□□□□□ -1.83
SORT1-202ENST00000466471 TDP1Q9NUW8 608 aa3.59□□□□□ -1.83
SORT1-202ENST00000466471 PANK4Q9NVE7 773 aa3.59□□□□□ -1.83
SORT1-202ENST00000466471 DDX43Q9NXZ2 648 aaKnown RBP3.59□□□□□ -1.83
SORT1-202ENST00000466471 TAB2Q9NYJ8 693 aa3.59□□□□□ -1.83
SORT1-202ENST00000466471 ARHGAP28Q9P2N2 729 aa3.59□□□□□ -1.83
SORT1-202ENST00000466471 SUCLA2Q9P2R7 463 aaPredicted RBP3.59□□□□□ -1.83
SORT1-202ENST00000466471 FAM153AQ9UHL3 310 aa3.59□□□□□ -1.83
SORT1-202ENST00000466471 NFU1Q9UMS0 254 aa3.59□□□□□ -1.83
SORT1-202ENST00000466471 CRYL1Q9Y2S2 319 aa3.59□□□□□ -1.83
SORT1-202ENST00000466471 MED16Q9Y2X0 877 aa3.59□□□□□ -1.83
SORT1-202ENST00000466471 SH3BP1Q9Y3L3 701 aa3.59□□□□□ -1.83
SORT1-202ENST00000466471 PCDHGB2Q9Y5G2 931 aa3.59□□□□□ -1.83
SORT1-202ENST00000466471 UTP18Q9Y5J1 556 aaKnown RBP eCLIP3.59□□□□□ -1.83
SORT1-202ENST00000466471 GMEB1Q9Y692 573 aa3.59□□□□□ -1.83
SORT1-202ENST00000466471 BZW2Q9Y6E2 419 aaKnown RBP3.59□□□□□ -1.83
SORT1-202ENST00000466471 DUSP10Q9Y6W6 482 aa3.59□□□□□ -1.83
SORT1-202ENST00000466471 ZNFX1Q9P2E3 1918 aaKnown RBP3.59□□□□□ -1.83
SORT1-202ENST00000466471 USP9YO00507 2555 aaPredicted RBP3.59□□□□□ -1.83
SORT1-202ENST00000466471 RALGAPA1Q6GYQ0 2036 aa3.59□□□□□ -1.83
SORT1-202ENST00000466471 ATMQ13315 3056 aa3.59□□□□□ -1.84
SORT1-202ENST00000466471 B4E171 279 aa3.58□□□□□ -1.84
SORT1-202ENST00000466471 IQCJ-SCHIP1C9J366 451 aaPredicted RBP3.58□□□□□ -1.84
SORT1-202ENST00000466471 H3BUI4 141 aa3.58□□□□□ -1.84
SORT1-202ENST00000466471 EIF3FO00303 357 aaPredicted RBP3.58□□□□□ -1.84
SORT1-202ENST00000466471 RAD51CO43502 376 aa3.58□□□□□ -1.84
SORT1-202ENST00000466471 CSDE1O75534 798 aaKnown RBP3.58□□□□□ -1.84
SORT1-202ENST00000466471 RNF8O76064 485 aa3.58□□□□□ -1.84
SORT1-202ENST00000466471 UNC5CO95185 931 aa3.58□□□□□ -1.84
SORT1-202ENST00000466471 PCDH8O95206 1070 aa3.58□□□□□ -1.84
SORT1-202ENST00000466471 GNA14O95837 355 aa3.58□□□□□ -1.84
SORT1-202ENST00000466471 PCCAP05165 728 aaPredicted RBP3.58□□□□□ -1.84
SORT1-202ENST00000466471 ENO2P09104 434 aaPredicted RBP3.58□□□□□ -1.84
SORT1-202ENST00000466471 VDRP11473 427 aa3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms