RNA–Protein interactions for RNA: ENST00000466192.5

COL9A3-205, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 2,194 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-205ENST00000466192 FBXW10Q5XX13 1052 aa18.57■□□□□ 0.56
COL9A3-205ENST00000466192 RFWD3Q6PCD5 774 aa18.57■□□□□ 0.56
COL9A3-205ENST00000466192 KLHDC10Q6PID8 442 aa18.57■□□□□ 0.56
COL9A3-205ENST00000466192 LGI2Q8N0V4 545 aa18.57■□□□□ 0.56
COL9A3-205ENST00000466192 CFAP52Q8N1V2 620 aa18.57■□□□□ 0.56
COL9A3-205ENST00000466192 SERBP1Q8NC51 408 aaKnown RBP eCLIP18.57■□□□□ 0.56
COL9A3-205ENST00000466192 FATE1Q969F0 183 aa18.57■□□□□ 0.56
COL9A3-205ENST00000466192 YME1L1Q96TA2 773 aa18.57■□□□□ 0.56
COL9A3-205ENST00000466192 TBL1YQ9BQ87 522 aa18.57■□□□□ 0.56
COL9A3-205ENST00000466192 CHRAC1Q9NRG0 131 aa18.57■□□□□ 0.56
COL9A3-205ENST00000466192 TRPM5Q9NZQ8 1165 aa18.57■□□□□ 0.56
COL9A3-205ENST00000466192 FAM237BA0A1B0GVD1 139 aa18.56■□□□□ 0.56
COL9A3-205ENST00000466192 ACSL4O60488 711 aa18.56■□□□□ 0.56
COL9A3-205ENST00000466192 TOP3BO95985 862 aaKnown RBP18.56■□□□□ 0.56
COL9A3-205ENST00000466192 BGNP21810 368 aa18.56■□□□□ 0.56
COL9A3-205ENST00000466192 CNTFP26441 200 aa18.56■□□□□ 0.56
COL9A3-205ENST00000466192 ADRA1AP35348 466 aa18.56■□□□□ 0.56
COL9A3-205ENST00000466192 DENND5AQ6IQ26 1287 aa18.56■□□□□ 0.56
COL9A3-205ENST00000466192 NECAB2Q7Z6G3 386 aa18.56■□□□□ 0.56
COL9A3-205ENST00000466192 TMEM199Q8N511 208 aa18.56■□□□□ 0.56
COL9A3-205ENST00000466192 ARMC2Q8NEN0 867 aa18.56■□□□□ 0.56
COL9A3-205ENST00000466192 KLHL5Q96PQ7 755 aa18.56■□□□□ 0.56
COL9A3-205ENST00000466192 MECRQ9BV79 373 aa18.56■□□□□ 0.56
COL9A3-205ENST00000466192 FICDQ9BVA6 458 aa18.56■□□□□ 0.56
COL9A3-205ENST00000466192 RXFP1Q9HBX9 757 aa18.56■□□□□ 0.56
COL9A3-205ENST00000466192 SOX13Q9UN79 622 aa18.56■□□□□ 0.56
COL9A3-205ENST00000466192 MAGEB16A2A368 324 aa18.55■□□□□ 0.56
COL9A3-205ENST00000466192 F5H5T6 163 aa18.55■□□□□ 0.56
COL9A3-205ENST00000466192 RAMP2O60895 175 aa18.55■□□□□ 0.56
COL9A3-205ENST00000466192 PMPCBO75439 489 aa18.55■□□□□ 0.56
COL9A3-205ENST00000466192 NEBLO76041 1014 aa18.55■□□□□ 0.56
COL9A3-205ENST00000466192 OR1E1P30953 314 aa18.55■□□□□ 0.56
COL9A3-205ENST00000466192 RENBPP51606 427 aa18.55■□□□□ 0.56
COL9A3-205ENST00000466192 GEMP55040 296 aa18.55■□□□□ 0.56
COL9A3-205ENST00000466192 TWF1Q12792 350 aa18.55■□□□□ 0.56
COL9A3-205ENST00000466192 OVGP1Q12889 678 aa18.55■□□□□ 0.56
COL9A3-205ENST00000466192 MTA1Q13330 715 aa18.55■□□□□ 0.56
COL9A3-205ENST00000466192 NAB1Q13506 487 aa18.55■□□□□ 0.56
COL9A3-205ENST00000466192 POLD3Q15054 466 aaPredicted RBP18.55■□□□□ 0.56
COL9A3-205ENST00000466192 C5orf22Q49AR2 442 aa18.55■□□□□ 0.56
COL9A3-205ENST00000466192 PABPC5Q96DU9 382 aaKnown RBP18.55■□□□□ 0.56
COL9A3-205ENST00000466192 TRMT2BQ96GJ1 504 aaKnown RBP18.55■□□□□ 0.56
COL9A3-205ENST00000466192 RNF38Q9H0F5 515 aa18.55■□□□□ 0.56
COL9A3-205ENST00000466192 SP110Q9HB58 689 aa18.55■□□□□ 0.56
COL9A3-205ENST00000466192 NPHS2Q9NP85 383 aa18.55■□□□□ 0.56
COL9A3-205ENST00000466192 GKN1Q9NS71 199 aa18.55■□□□□ 0.56
COL9A3-205ENST00000466192 HAUS2Q9NVX0 235 aa18.55■□□□□ 0.56
COL9A3-205ENST00000466192 TXNDC16Q9P2K2 825 aa18.55■□□□□ 0.56
COL9A3-205ENST00000466192 AP3B1O00203 1094 aa18.55■□□□□ 0.56
COL9A3-205ENST00000466192 PRRG1O14668 218 aa18.55■□□□□ 0.56
COL9A3-205ENST00000466192 HARS2P49590 506 aaKnown RBP18.55■□□□□ 0.56
COL9A3-205ENST00000466192 TAF12Q16514 161 aa18.55■□□□□ 0.56
COL9A3-205ENST00000466192 ZNF449Q6P9G9 518 aa18.55■□□□□ 0.56
COL9A3-205ENST00000466192 ZNF354CQ86Y25 554 aa18.55■□□□□ 0.56
COL9A3-205ENST00000466192 DENND1CQ8IV53 801 aa18.55■□□□□ 0.56
COL9A3-205ENST00000466192 MRGPRX2Q96LB1 330 aa18.55■□□□□ 0.56
COL9A3-205ENST00000466192 ZNF778Q96MU6 729 aa18.55■□□□□ 0.56
COL9A3-205ENST00000466192 TSSK1BQ9BXA7 367 aa18.55■□□□□ 0.56
COL9A3-205ENST00000466192 NT5MQ9NPB1 228 aa18.55■□□□□ 0.56
COL9A3-205ENST00000466192 DENND4CQ5VZ89 1909 aa18.54■□□□□ 0.56
COL9A3-205ENST00000466192 C2orf78A6NCI8 922 aa18.54■□□□□ 0.56
COL9A3-205ENST00000466192 KLKB1P03952 638 aa18.54■□□□□ 0.56
COL9A3-205ENST00000466192 ALDOAP04075 364 aaKnown RBP18.54■□□□□ 0.56
COL9A3-205ENST00000466192 GSTA1P08263 222 aa18.54■□□□□ 0.56
COL9A3-205ENST00000466192 ITGA2BP08514 1039 aa18.54■□□□□ 0.56
COL9A3-205ENST00000466192 NMBRP28336 390 aa18.54■□□□□ 0.56
COL9A3-205ENST00000466192 ACVRL1P37023 503 aa18.54■□□□□ 0.56
COL9A3-205ENST00000466192 MAPKAPK2P49137 400 aa18.54■□□□□ 0.56
COL9A3-205ENST00000466192 NUMBP49757 651 aa18.54■□□□□ 0.56
COL9A3-205ENST00000466192 MAXP61244 160 aa18.54■□□□□ 0.56
COL9A3-205ENST00000466192 SERINC3Q13530 473 aa18.54■□□□□ 0.56
COL9A3-205ENST00000466192 FRG1Q14331 258 aaKnown RBP18.54■□□□□ 0.56
COL9A3-205ENST00000466192 PARP15Q460N3 678 aa18.54■□□□□ 0.56
COL9A3-205ENST00000466192 GALNTL6Q49A17 601 aa18.54■□□□□ 0.56
COL9A3-205ENST00000466192 MARC1Q5VT66 337 aa18.54■□□□□ 0.56
COL9A3-205ENST00000466192 FYB2Q5VWT5 728 aa18.54■□□□□ 0.56
COL9A3-205ENST00000466192 TIFABQ6ZNK6 161 aa18.54■□□□□ 0.56
COL9A3-205ENST00000466192 DNAJB7Q7Z6W7 309 aaPredicted RBP18.54■□□□□ 0.56
COL9A3-205ENST00000466192 GBP7Q8N8V2 638 aaPredicted RBP18.54■□□□□ 0.56
COL9A3-205ENST00000466192 SLC25A51Q9H1U9 297 aa18.54■□□□□ 0.56
COL9A3-205ENST00000466192 MRPL17Q9NRX2 175 aaKnown RBP18.54■□□□□ 0.56
COL9A3-205ENST00000466192 MKS1Q9NXB0 559 aa18.54■□□□□ 0.56
COL9A3-205ENST00000466192 USH1CQ9Y6N9 552 aa18.54■□□□□ 0.56
COL9A3-205ENST00000466192 TPP1O14773 563 aa18.54■□□□□ 0.56
COL9A3-205ENST00000466192 TEX28O15482 410 aa18.54■□□□□ 0.56
COL9A3-205ENST00000466192 STC2O76061 302 aa18.54■□□□□ 0.56
COL9A3-205ENST00000466192 BAIAP3O94812 1187 aa18.54■□□□□ 0.56
COL9A3-205ENST00000466192 CRHR1P34998 444 aa18.54■□□□□ 0.56
COL9A3-205ENST00000466192 VEPH1Q14D04 833 aa18.54■□□□□ 0.56
COL9A3-205ENST00000466192 C16orf59Q7L2K0 433 aa18.54■□□□□ 0.56
COL9A3-205ENST00000466192 TCEAL8Q8IYN2 117 aa18.54■□□□□ 0.56
COL9A3-205ENST00000466192 TEX26Q8N6G2 289 aa18.54■□□□□ 0.56
COL9A3-205ENST00000466192 PPP1R2P1Q96PQ5 205 aa18.54■□□□□ 0.56
COL9A3-205ENST00000466192 KIFC1Q9BW19 673 aa18.54■□□□□ 0.56
COL9A3-205ENST00000466192 INSL5Q9Y5Q6 135 aa18.54■□□□□ 0.56
COL9A3-205ENST00000466192 F7P08709 466 aaPredicted RBP18.53■□□□□ 0.56
COL9A3-205ENST00000466192 HSPA8P11142 646 aaKnown RBP18.53■□□□□ 0.56
COL9A3-205ENST00000466192 ELF1P32519 619 aa18.53■□□□□ 0.56
COL9A3-205ENST00000466192 SLC11A2P49281 568 aa18.53■□□□□ 0.56
COL9A3-205ENST00000466192 YBEYP58557 167 aaPredicted RBP18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms