RNA–Protein interactions for RNA: ENST00000465269.5

HDAC6-214, Transcript of histone deacetylase 6, humanhuman

TSL 1 (best)

Gene HDAC6, Length 1,139 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-214ENST00000465269 CCAR2Q8N163 923 aaKnown RBP15.33■□□□□ 0.04
HDAC6-214ENST00000465269 KYQ8NBH2 561 aa15.33■□□□□ 0.04
HDAC6-214ENST00000465269 GOLGA5Q8TBA6 731 aa15.33■□□□□ 0.04
HDAC6-214ENST00000465269 GRIN3AQ8TCU5 1115 aa15.33■□□□□ 0.04
HDAC6-214ENST00000465269 ALG14Q96F25 216 aa15.33■□□□□ 0.04
HDAC6-214ENST00000465269 SLC39A13Q96H72 371 aa15.33■□□□□ 0.04
HDAC6-214ENST00000465269 GFM1Q96RP9 751 aaKnown RBP15.33■□□□□ 0.04
HDAC6-214ENST00000465269 DDX50Q9BQ39 737 aaKnown RBP15.33■□□□□ 0.04
HDAC6-214ENST00000465269 SLC12A9Q9BXP2 914 aa15.33■□□□□ 0.04
HDAC6-214ENST00000465269 CLPBQ9H078 707 aa15.33■□□□□ 0.04
HDAC6-214ENST00000465269 MIS12Q9H081 205 aa15.33■□□□□ 0.04
HDAC6-214ENST00000465269 CNGB3Q9NQW8 809 aa15.33■□□□□ 0.04
HDAC6-214ENST00000465269 SEPT10Q9P0V9 454 aa15.33■□□□□ 0.04
HDAC6-214ENST00000465269 NAALADL1Q9UQQ1 740 aa15.33■□□□□ 0.04
HDAC6-214ENST00000465269 DAAM1Q9Y4D1 1078 aa15.33■□□□□ 0.04
HDAC6-214ENST00000465269 NVLO15381 856 aaKnown RBP15.32■□□□□ 0.04
HDAC6-214ENST00000465269 YY2O15391 372 aa15.32■□□□□ 0.04
HDAC6-214ENST00000465269 UQCRFS1P47985 274 aa15.32■□□□□ 0.04
HDAC6-214ENST00000465269 AMPD3Q01432 767 aa15.32■□□□□ 0.04
HDAC6-214ENST00000465269 NEK5Q6P3R8 708 aa15.32■□□□□ 0.04
HDAC6-214ENST00000465269 TAC4Q86UU9 113 aa15.32■□□□□ 0.04
HDAC6-214ENST00000465269 DTX1Q86Y01 620 aa15.32■□□□□ 0.04
HDAC6-214ENST00000465269 NAT6Q93015 286 aa15.32■□□□□ 0.04
HDAC6-214ENST00000465269 LRRC61Q9BV99 259 aa15.32■□□□□ 0.04
HDAC6-214ENST00000465269 SLC17A9Q9BYT1 436 aa15.32■□□□□ 0.04
HDAC6-214ENST00000465269 CPEB1Q9BZB8 566 aaKnown RBP15.32■□□□□ 0.04
HDAC6-214ENST00000465269 STRADBQ9C0K7 418 aa15.32■□□□□ 0.04
HDAC6-214ENST00000465269 ADNPQ9H2P0 1102 aa15.32■□□□□ 0.04
HDAC6-214ENST00000465269 HESX1Q9UBX0 185 aa15.32■□□□□ 0.04
HDAC6-214ENST00000465269 APOBEC3BQ9UH17 382 aaKnown RBP15.32■□□□□ 0.04
HDAC6-214ENST00000465269 HS3ST3A1Q9Y663 406 aa15.32■□□□□ 0.04
HDAC6-214ENST00000465269 SDK2Q58EX2 2172 aa15.32■□□□□ 0.04
HDAC6-214ENST00000465269 A1L4Q6 167 aa15.31■□□□□ 0.04
HDAC6-214ENST00000465269 TPP1O14773 563 aa15.31■□□□□ 0.04
HDAC6-214ENST00000465269 TSHRP16473 764 aa15.31■□□□□ 0.04
HDAC6-214ENST00000465269 CHRNA3P32297 505 aa15.31■□□□□ 0.04
HDAC6-214ENST00000465269 GGCXP38435 758 aa15.31■□□□□ 0.04
HDAC6-214ENST00000465269 RPIAP49247 311 aa15.31■□□□□ 0.04
HDAC6-214ENST00000465269 PITX1P78337 314 aaPredicted RBP15.31■□□□□ 0.04
HDAC6-214ENST00000465269 ZNF787Q6DD87 383 aa15.31■□□□□ 0.04
HDAC6-214ENST00000465269 NYAP1Q6ZVC0 841 aa15.31■□□□□ 0.04
HDAC6-214ENST00000465269 DCP2Q8IU60 420 aaKnown RBP15.31■□□□□ 0.04
HDAC6-214ENST00000465269 SH2D3CQ8N5H7 860 aa15.31■□□□□ 0.04
HDAC6-214ENST00000465269 Q8N9G6 341 aaPredicted RBP15.31■□□□□ 0.04
HDAC6-214ENST00000465269 KCTD13Q8WZ19 329 aa15.31■□□□□ 0.04
HDAC6-214ENST00000465269 TFAP2BQ92481 460 aa15.31■□□□□ 0.04
HDAC6-214ENST00000465269 ERCC4Q92889 916 aaPredicted RBP15.31■□□□□ 0.04
HDAC6-214ENST00000465269 PMEPA1Q969W9 287 aa15.31■□□□□ 0.04
HDAC6-214ENST00000465269 DNAI2Q9GZS0 605 aa15.31■□□□□ 0.04
HDAC6-214ENST00000465269 SLC25A13Q9UJS0 675 aa15.31■□□□□ 0.04
HDAC6-214ENST00000465269 LMO7DNF2Z398 122 aa15.3■□□□□ 0.04
HDAC6-214ENST00000465269 O00370 1275 aa15.3■□□□□ 0.04
HDAC6-214ENST00000465269 ALOX15BO15296 676 aa15.3■□□□□ 0.04
HDAC6-214ENST00000465269 SMAD6O43541 496 aaKnown RBP15.3■□□□□ 0.04
HDAC6-214ENST00000465269 SNAP91O60641 907 aa15.3■□□□□ 0.04
HDAC6-214ENST00000465269 ENDOD1O94919 500 aa15.3■□□□□ 0.04
HDAC6-214ENST00000465269 ANXA6P08133 673 aa15.3■□□□□ 0.04
HDAC6-214ENST00000465269 SRCP12931 536 aa15.3■□□□□ 0.04
HDAC6-214ENST00000465269 PDIA4P13667 645 aaKnown RBP15.3■□□□□ 0.04
HDAC6-214ENST00000465269 RRM1P23921 792 aa15.3■□□□□ 0.04
HDAC6-214ENST00000465269 COL8A1P27658 744 aa15.3■□□□□ 0.04
HDAC6-214ENST00000465269 MLLT10P55197 1068 aa15.3■□□□□ 0.04
HDAC6-214ENST00000465269 NUCB2P80303 420 aa15.3■□□□□ 0.04
HDAC6-214ENST00000465269 SULT2A1Q06520 285 aa15.3■□□□□ 0.04
HDAC6-214ENST00000465269 EIF3IQ13347 325 aaKnown RBP15.3■□□□□ 0.04
HDAC6-214ENST00000465269 ARSIQ5FYB1 569 aa15.3■□□□□ 0.04
HDAC6-214ENST00000465269 SYPL2Q5VXT5 272 aa15.3■□□□□ 0.04
HDAC6-214ENST00000465269 SHC4Q6S5L8 630 aa15.3■□□□□ 0.04
HDAC6-214ENST00000465269 ERN2Q76MJ5 926 aaKnown RBP15.3■□□□□ 0.04
HDAC6-214ENST00000465269 TMPRSS9Q7Z410 1059 aa15.3■□□□□ 0.04
HDAC6-214ENST00000465269 PHACTR4Q8IZ21 702 aa15.3■□□□□ 0.04
HDAC6-214ENST00000465269 CCDC150Q8NCX0 1101 aa15.3■□□□□ 0.04
HDAC6-214ENST00000465269 OR2A12Q8NGT7 310 aa15.3■□□□□ 0.04
HDAC6-214ENST00000465269 WDR48Q8TAF3 677 aa15.3■□□□□ 0.04
HDAC6-214ENST00000465269 GLMNQ92990 594 aa15.3■□□□□ 0.04
HDAC6-214ENST00000465269 MIB2Q96AX9 1013 aa15.3■□□□□ 0.04
HDAC6-214ENST00000465269 KLF6Q99612 283 aaPredicted RBP15.3■□□□□ 0.04
HDAC6-214ENST00000465269 TNKS2Q9H2K2 1166 aa15.3■□□□□ 0.04
HDAC6-214ENST00000465269 CUEDC2Q9H467 287 aa15.3■□□□□ 0.04
HDAC6-214ENST00000465269 SPASTQ9UBP0 616 aa15.3■□□□□ 0.04
HDAC6-214ENST00000465269 GGT7Q9UJ14 662 aa15.3■□□□□ 0.04
HDAC6-214ENST00000465269 ANAPC2Q9UJX6 822 aa15.3■□□□□ 0.04
HDAC6-214ENST00000465269 TLR6Q9Y2C9 796 aa15.3■□□□□ 0.04
HDAC6-214ENST00000465269 FRMD4BQ9Y2L6 1034 aa15.3■□□□□ 0.04
HDAC6-214ENST00000465269 PCDHB11Q9Y5F2 797 aa15.3■□□□□ 0.04
HDAC6-214ENST00000465269 IGLON5A6NGN9 336 aa15.29■□□□□ 0.04
HDAC6-214ENST00000465269 POLR2DO15514 142 aaKnown RBP15.29■□□□□ 0.04
HDAC6-214ENST00000465269 KLRC4O43908 158 aa15.29■□□□□ 0.04
HDAC6-214ENST00000465269 POU3F2P20265 443 aaPredicted RBP15.29■□□□□ 0.04
HDAC6-214ENST00000465269 RABIFP47224 123 aa15.29■□□□□ 0.04
HDAC6-214ENST00000465269 PLK1P53350 603 aa15.29■□□□□ 0.04
HDAC6-214ENST00000465269 SFTPA2Q8IWL1 248 aa15.29■□□□□ 0.04
HDAC6-214ENST00000465269 IQUBQ8NA54 791 aa15.29■□□□□ 0.04
HDAC6-214ENST00000465269 PCDH19Q8TAB3 1148 aa15.29■□□□□ 0.04
HDAC6-214ENST00000465269 SERPINB11Q96P15 392 aa15.29■□□□□ 0.04
HDAC6-214ENST00000465269 ZSWIM1Q9BR11 485 aa15.29■□□□□ 0.04
HDAC6-214ENST00000465269 FEM1AQ9BSK4 669 aa15.29■□□□□ 0.04
HDAC6-214ENST00000465269 DYRK4Q9NR20 520 aa15.29■□□□□ 0.04
HDAC6-214ENST00000465269 VPS28Q9UK41 221 aa15.29■□□□□ 0.04
HDAC6-214ENST00000465269 OR51B4Q9Y5P0 310 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms