RNA–Protein interactions for RNA: ENST00000463539.5

CCDC78-206, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 1,831 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-206ENST00000463539 ROPN1BQ9BZX4 212 aaPredicted RBP19.35■□□□□ 0.69
CCDC78-206ENST00000463539 SLC25A51Q9H1U9 297 aa19.35■□□□□ 0.69
CCDC78-206ENST00000463539 NSUN3Q9H649 340 aaKnown RBP19.35■□□□□ 0.69
CCDC78-206ENST00000463539 ROPN1Q9HAT0 212 aaPredicted RBP19.35■□□□□ 0.69
CCDC78-206ENST00000463539 ZC3H7BQ9UGR2 993 aaKnown RBP19.35■□□□□ 0.69
CCDC78-206ENST00000463539 MAD1L1Q9Y6D9 718 aa19.35■□□□□ 0.69
CCDC78-206ENST00000463539 DENND4CQ5VZ89 1909 aa19.34■□□□□ 0.69
CCDC78-206ENST00000463539 CBX4O00257 560 aa19.34■□□□□ 0.69
CCDC78-206ENST00000463539 RASGRF2O14827 1237 aa19.34■□□□□ 0.69
CCDC78-206ENST00000463539 USP12O75317 370 aa19.34■□□□□ 0.69
CCDC78-206ENST00000463539 SSTR1P30872 391 aa19.34■□□□□ 0.69
CCDC78-206ENST00000463539 GEMP55040 296 aa19.34■□□□□ 0.69
CCDC78-206ENST00000463539 SESN2P58004 480 aaPredicted RBP19.34■□□□□ 0.69
CCDC78-206ENST00000463539 USP4Q13107 963 aa19.34■□□□□ 0.69
CCDC78-206ENST00000463539 OLIG2Q13516 323 aa19.34■□□□□ 0.69
CCDC78-206ENST00000463539 NAPEPLDQ6IQ20 393 aa19.34■□□□□ 0.69
CCDC78-206ENST00000463539 BBS5Q8N3I7 341 aa19.34■□□□□ 0.69
CCDC78-206ENST00000463539 OR52K1Q8NGK4 314 aa19.34■□□□□ 0.69
CCDC78-206ENST00000463539 SIGLEC10Q96LC7 697 aa19.34■□□□□ 0.69
CCDC78-206ENST00000463539 HAUS2Q9NVX0 235 aa19.34■□□□□ 0.69
CCDC78-206ENST00000463539 PIH1D1Q9NWS0 290 aaKnown RBP19.34■□□□□ 0.69
CCDC78-206ENST00000463539 UBA2Q9UBT2 640 aaPredicted RBP19.34■□□□□ 0.69
CCDC78-206ENST00000463539 TLDC2A0PJX2 215 aa19.33■□□□□ 0.69
CCDC78-206ENST00000463539 SDR42E2A6NKP2 422 aa19.33■□□□□ 0.69
CCDC78-206ENST00000463539 SPAG6O75602 509 aa19.33■□□□□ 0.69
CCDC78-206ENST00000463539 MT-CYBP00156 380 aaPredicted RBP19.33■□□□□ 0.69
CCDC78-206ENST00000463539 TCF3P15923 654 aa19.33■□□□□ 0.69
CCDC78-206ENST00000463539 GLDCP23378 1020 aa19.33■□□□□ 0.69
CCDC78-206ENST00000463539 SLCO1A2P46721 670 aa19.33■□□□□ 0.69
CCDC78-206ENST00000463539 MAXP61244 160 aa19.33■□□□□ 0.69
CCDC78-206ENST00000463539 LONRF1Q17RB8 773 aa19.33■□□□□ 0.69
CCDC78-206ENST00000463539 LINC00523Q86TU6 105 aa19.33■□□□□ 0.69
CCDC78-206ENST00000463539 DNAAF3Q8N9W5 541 aa19.33■□□□□ 0.69
CCDC78-206ENST00000463539 IPMKQ8NFU5 416 aa19.33■□□□□ 0.69
CCDC78-206ENST00000463539 CFAP36Q96G28 342 aa19.33■□□□□ 0.69
CCDC78-206ENST00000463539 ATP6V1G3Q96LB4 118 aa19.33■□□□□ 0.69
CCDC78-206ENST00000463539 EBNA1BP2Q99848 306 aaKnown RBP19.33■□□□□ 0.69
CCDC78-206ENST00000463539 POLR1EQ9GZS1 481 aaKnown RBP19.33■□□□□ 0.69
CCDC78-206ENST00000463539 PLK2Q9NYY3 685 aa19.33■□□□□ 0.69
CCDC78-206ENST00000463539 VPS28Q9UK41 221 aa19.33■□□□□ 0.69
CCDC78-206ENST00000463539 EXOC1LA0A1B0GW35 172 aa19.32■□□□□ 0.68
CCDC78-206ENST00000463539 TCEA3O75764 348 aa19.32■□□□□ 0.68
CCDC78-206ENST00000463539 GLP2RO95838 553 aa19.32■□□□□ 0.68
CCDC78-206ENST00000463539 MGAT1P26572 445 aa19.32■□□□□ 0.68
CCDC78-206ENST00000463539 HYAL1Q12794 435 aa19.32■□□□□ 0.68
CCDC78-206ENST00000463539 RFTN1Q14699 578 aaPredicted RBP19.32■□□□□ 0.68
CCDC78-206ENST00000463539 TCEAL5Q5H9L2 206 aa19.32■□□□□ 0.68
CCDC78-206ENST00000463539 KCTD16Q68DU8 428 aa19.32■□□□□ 0.68
CCDC78-206ENST00000463539 CASC4Q6P4E1 433 aa19.32■□□□□ 0.68
CCDC78-206ENST00000463539 POTEHQ6S545 545 aa19.32■□□□□ 0.68
CCDC78-206ENST00000463539 MPP5Q8N3R9 675 aa19.32■□□□□ 0.68
CCDC78-206ENST00000463539 WFDC5Q8TCV5 224 aa19.32■□□□□ 0.68
CCDC78-206ENST00000463539 STAMBPL1Q96FJ0 436 aa19.32■□□□□ 0.68
CCDC78-206ENST00000463539 IMP4Q96G21 291 aaKnown RBP19.32■□□□□ 0.68
CCDC78-206ENST00000463539 FEM1AQ9BSK4 669 aa19.32■□□□□ 0.68
CCDC78-206ENST00000463539 APOL5Q9BWW9 433 aa19.32■□□□□ 0.68
CCDC78-206ENST00000463539 KIF9Q9HAQ2 790 aa19.32■□□□□ 0.68
CCDC78-206ENST00000463539 CASS4Q9NQ75 786 aa19.32■□□□□ 0.68
CCDC78-206ENST00000463539 TBC1D14Q9P2M4 693 aa19.32■□□□□ 0.68
CCDC78-206ENST00000463539 SEPT3Q9UH03 358 aa19.32■□□□□ 0.68
CCDC78-206ENST00000463539 SHROOM3Q8TF72 1996 aa19.32■□□□□ 0.68
CCDC78-206ENST00000463539 ATG2AQ2TAZ0 1938 aa19.32■□□□□ 0.68
CCDC78-206ENST00000463539 AP3B1O00203 1094 aa19.32■□□□□ 0.68
CCDC78-206ENST00000463539 FSHRP23945 695 aa19.32■□□□□ 0.68
CCDC78-206ENST00000463539 MZF1P28698 734 aaPredicted RBP19.32■□□□□ 0.68
CCDC78-206ENST00000463539 CSKP41240 450 aa19.32■□□□□ 0.68
CCDC78-206ENST00000463539 MPP3Q13368 585 aa19.32■□□□□ 0.68
CCDC78-206ENST00000463539 TMEM184AQ6ZMB5 413 aa19.32■□□□□ 0.68
CCDC78-206ENST00000463539 PGBD5Q8N414 524 aa19.32■□□□□ 0.68
CCDC78-206ENST00000463539 EFHBQ8N7U6 833 aa19.32■□□□□ 0.68
CCDC78-206ENST00000463539 TBL1YQ9BQ87 522 aa19.32■□□□□ 0.68
CCDC78-206ENST00000463539 APOL2Q9BQE5 337 aa19.32■□□□□ 0.68
CCDC78-206ENST00000463539 CINPQ9BW66 212 aaPredicted RBP19.32■□□□□ 0.68
CCDC78-206ENST00000463539 FSD1LQ9BXM9 530 aa19.32■□□□□ 0.68
CCDC78-206ENST00000463539 VPS18Q9P253 973 aa19.32■□□□□ 0.68
CCDC78-206ENST00000463539 BCCIPQ9P287 314 aaKnown RBP eCLIP19.32■□□□□ 0.68
CCDC78-206ENST00000463539 HMGB1P1B2RPK0 211 aaPredicted RBP19.31■□□□□ 0.68
CCDC78-206ENST00000463539 POLR3GO15318 223 aaPredicted RBP19.31■□□□□ 0.68
CCDC78-206ENST00000463539 PMPCBO75439 489 aa19.31■□□□□ 0.68
CCDC78-206ENST00000463539 CD86P42081 329 aa19.31■□□□□ 0.68
CCDC78-206ENST00000463539 DSC2Q02487 901 aa19.31■□□□□ 0.68
CCDC78-206ENST00000463539 CDH17Q12864 832 aa19.31■□□□□ 0.68
CCDC78-206ENST00000463539 FYB2Q5VWT5 728 aa19.31■□□□□ 0.68
CCDC78-206ENST00000463539 RNF43Q68DV7 783 aa19.31■□□□□ 0.68
CCDC78-206ENST00000463539 CHRDL2Q6WN34 429 aa19.31■□□□□ 0.68
CCDC78-206ENST00000463539 GPR149Q86SP6 731 aa19.31■□□□□ 0.68
CCDC78-206ENST00000463539 PRPF39Q86UA1 669 aaKnown RBP19.31■□□□□ 0.68
CCDC78-206ENST00000463539 CELF5Q8N6W0 485 aaKnown RBP19.31■□□□□ 0.68
CCDC78-206ENST00000463539 FBF1Q8TES7 1133 aa19.31■□□□□ 0.68
CCDC78-206ENST00000463539 PGM2Q96G03 612 aa19.31■□□□□ 0.68
CCDC78-206ENST00000463539 VPS45Q9NRW7 570 aa19.31■□□□□ 0.68
CCDC78-206ENST00000463539 BFARQ9NZS9 450 aa19.31■□□□□ 0.68
CCDC78-206ENST00000463539 OR51B4Q9Y5P0 310 aa19.31■□□□□ 0.68
CCDC78-206ENST00000463539 NOTCH4Q99466 2003 aa19.31■□□□□ 0.68
CCDC78-206ENST00000463539 RGS16O15492 202 aaPredicted RBP19.3■□□□□ 0.68
CCDC78-206ENST00000463539 LINC01565O15544 149 aa19.3■□□□□ 0.68
CCDC78-206ENST00000463539 WEE1P30291 646 aa19.3■□□□□ 0.68
CCDC78-206ENST00000463539 CRADDP78560 199 aa19.3■□□□□ 0.68
CCDC78-206ENST00000463539 ARF5P84085 180 aa19.3■□□□□ 0.68
CCDC78-206ENST00000463539 NIPAL4Q0D2K0 466 aa19.3■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms