RNA–Protein interactions for RNA: ENST00000463060.5

COL6A1-202, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 5

Gene COL6A1, Length 863 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-202ENST00000463060 CCDC110Q8TBZ0 833 aa14.61□□□□□ -0.07
COL6A1-202ENST00000463060 CASKIN2Q8WXE0 1202 aa14.61□□□□□ -0.07
COL6A1-202ENST00000463060 EZH1Q92800 747 aaPredicted RBP14.61□□□□□ -0.07
COL6A1-202ENST00000463060 MYO19Q96H55 970 aa14.61□□□□□ -0.07
COL6A1-202ENST00000463060 CCDC114Q96M63 670 aa14.61□□□□□ -0.07
COL6A1-202ENST00000463060 PSKH2Q96QS6 385 aa14.61□□□□□ -0.07
COL6A1-202ENST00000463060 TRIM51Q9BSJ1 452 aa14.61□□□□□ -0.07
COL6A1-202ENST00000463060 HEBP1Q9NRV9 189 aa14.61□□□□□ -0.07
COL6A1-202ENST00000463060 RBM22Q9NW64 420 aaKnown RBP eCLIP14.61□□□□□ -0.07
COL6A1-202ENST00000463060 DUSP12Q9UNI6 340 aa14.61□□□□□ -0.07
COL6A1-202ENST00000463060 K7ERQ8 282 aa14.6□□□□□ -0.07
COL6A1-202ENST00000463060 TP73O15350 636 aa14.6□□□□□ -0.07
COL6A1-202ENST00000463060 SMAD6O43541 496 aaKnown RBP14.6□□□□□ -0.07
COL6A1-202ENST00000463060 OPHN1O60890 802 aa14.6□□□□□ -0.07
COL6A1-202ENST00000463060 KAT7O95251 611 aa14.6□□□□□ -0.07
COL6A1-202ENST00000463060 METTL18O95568 372 aa14.6□□□□□ -0.07
COL6A1-202ENST00000463060 IFNB1P01574 187 aa14.6□□□□□ -0.07
COL6A1-202ENST00000463060 ASLP04424 464 aa14.6□□□□□ -0.07
COL6A1-202ENST00000463060 DLDP09622 509 aaKnown RBP14.6□□□□□ -0.07
COL6A1-202ENST00000463060 SRCP12931 536 aa14.6□□□□□ -0.07
COL6A1-202ENST00000463060 POLR2EP19388 210 aaKnown RBP14.6□□□□□ -0.07
COL6A1-202ENST00000463060 CR2P20023 1033 aa14.6□□□□□ -0.07
COL6A1-202ENST00000463060 GRIA2P42262 883 aa14.6□□□□□ -0.07
COL6A1-202ENST00000463060 GEMIN4P57678 1058 aaKnown RBP14.6□□□□□ -0.07
COL6A1-202ENST00000463060 SLC7A5Q01650 507 aa14.6□□□□□ -0.07
COL6A1-202ENST00000463060 IHHQ14623 411 aa14.6□□□□□ -0.07
COL6A1-202ENST00000463060 EIF4HQ15056 248 aaKnown RBP14.6□□□□□ -0.07
COL6A1-202ENST00000463060 PTPRNQ16849 979 aa14.6□□□□□ -0.07
COL6A1-202ENST00000463060 TMEM196Q5HYL7 178 aa14.6□□□□□ -0.07
COL6A1-202ENST00000463060 ALG1LQ6GMV1 187 aa14.6□□□□□ -0.07
COL6A1-202ENST00000463060 PID1Q7Z2X4 250 aa14.6□□□□□ -0.07
COL6A1-202ENST00000463060 SUGP1Q8IWZ8 645 aaKnown RBP14.6□□□□□ -0.07
COL6A1-202ENST00000463060 CCDC89Q8N998 374 aa14.6□□□□□ -0.07
COL6A1-202ENST00000463060 VOPP1Q96AW1 172 aa14.6□□□□□ -0.07
COL6A1-202ENST00000463060 ISG20Q96AZ6 181 aaKnown RBP14.6□□□□□ -0.07
COL6A1-202ENST00000463060 TADA1Q96BN2 335 aa14.6□□□□□ -0.07
COL6A1-202ENST00000463060 P2RY13Q9BPV8 354 aa14.6□□□□□ -0.07
COL6A1-202ENST00000463060 FERMT1Q9BQL6 677 aa14.6□□□□□ -0.07
COL6A1-202ENST00000463060 GORASP1Q9BQQ3 440 aa14.6□□□□□ -0.07
COL6A1-202ENST00000463060 COL25A1Q9BXS0 654 aaPredicted RBP14.6□□□□□ -0.07
COL6A1-202ENST00000463060 CEP41Q9BYV8 373 aa14.6□□□□□ -0.07
COL6A1-202ENST00000463060 SEPT10Q9P0V9 454 aa14.6□□□□□ -0.07
COL6A1-202ENST00000463060 PAK5Q9P286 719 aa14.6□□□□□ -0.07
COL6A1-202ENST00000463060 LHX3Q9UBR4 397 aa14.6□□□□□ -0.07
COL6A1-202ENST00000463060 UBA2Q9UBT2 640 aaPredicted RBP14.6□□□□□ -0.07
COL6A1-202ENST00000463060 SLCO3A1Q9UIG8 710 aa14.6□□□□□ -0.07
COL6A1-202ENST00000463060 ERVW-1Q9UQF0 538 aa14.6□□□□□ -0.07
COL6A1-202ENST00000463060 STARD13Q9Y3M8 1113 aa14.6□□□□□ -0.07
COL6A1-202ENST00000463060 PIAS3Q9Y6X2 628 aa14.6□□□□□ -0.07
COL6A1-202ENST00000463060 F5P12259 2224 aa14.6□□□□□ -0.07
COL6A1-202ENST00000463060 K7EQS6 105 aa14.59□□□□□ -0.07
COL6A1-202ENST00000463060 ATP9BO43861 1147 aa14.59□□□□□ -0.07
COL6A1-202ENST00000463060 STK10O94804 968 aaKnown RBP14.59□□□□□ -0.07
COL6A1-202ENST00000463060 HLA-DQB2P05538 268 aa14.59□□□□□ -0.07
COL6A1-202ENST00000463060 SRPRAP08240 638 aaKnown RBP14.59□□□□□ -0.07
COL6A1-202ENST00000463060 MAGEA6P43360 314 aa14.59□□□□□ -0.07
COL6A1-202ENST00000463060 TNFRSF4P43489 277 aa14.59□□□□□ -0.07
COL6A1-202ENST00000463060 MMP13P45452 471 aa14.59□□□□□ -0.07
COL6A1-202ENST00000463060 SERPINH1P50454 418 aaKnown RBP14.59□□□□□ -0.07
COL6A1-202ENST00000463060 KDSRQ06136 332 aa14.59□□□□□ -0.07
COL6A1-202ENST00000463060 NSUN2Q08J23 767 aaKnown RBP eCLIP14.59□□□□□ -0.07
COL6A1-202ENST00000463060 TRADDQ15628 312 aa14.59□□□□□ -0.07
COL6A1-202ENST00000463060 TRIP13Q15645 432 aaPredicted RBP14.59□□□□□ -0.07
COL6A1-202ENST00000463060 PARP6Q2NL67 630 aa14.59□□□□□ -0.07
COL6A1-202ENST00000463060 PREPLQ4J6C6 727 aaPredicted RBP14.59□□□□□ -0.07
COL6A1-202ENST00000463060 SLC44A4Q53GD3 710 aa14.59□□□□□ -0.07
COL6A1-202ENST00000463060 DGKKQ5KSL6 1271 aa14.59□□□□□ -0.07
COL6A1-202ENST00000463060 TEX35Q5T0J7 233 aa14.59□□□□□ -0.07
COL6A1-202ENST00000463060 ZNF354CQ86Y25 554 aa14.59□□□□□ -0.07
COL6A1-202ENST00000463060 SH2D3CQ8N5H7 860 aa14.59□□□□□ -0.07
COL6A1-202ENST00000463060 KDM1BQ8NB78 822 aa14.59□□□□□ -0.07
COL6A1-202ENST00000463060 TSEN2Q8NCE0 465 aaKnown RBP14.59□□□□□ -0.07
COL6A1-202ENST00000463060 ARRDC2Q8TBH0 407 aa14.59□□□□□ -0.07
COL6A1-202ENST00000463060 USP33Q8TEY7 942 aa14.59□□□□□ -0.07
COL6A1-202ENST00000463060 FRS2Q8WU20 508 aa14.59□□□□□ -0.07
COL6A1-202ENST00000463060 SORCS1Q8WY21 1168 aa14.59□□□□□ -0.07
COL6A1-202ENST00000463060 RPL10LQ96L21 214 aaKnown RBP14.59□□□□□ -0.07
COL6A1-202ENST00000463060 NSMCE3Q96MG7 304 aa14.59□□□□□ -0.07
COL6A1-202ENST00000463060 AGAP3Q96P47 875 aa14.59□□□□□ -0.07
COL6A1-202ENST00000463060 FCRL5Q96RD9 977 aa14.59□□□□□ -0.07
COL6A1-202ENST00000463060 MGME1Q9BQP7 344 aa14.59□□□□□ -0.07
COL6A1-202ENST00000463060 ANKZF1Q9H8Y5 726 aa14.59□□□□□ -0.07
COL6A1-202ENST00000463060 GLOD4Q9HC38 313 aa14.59□□□□□ -0.07
COL6A1-202ENST00000463060 SEPT3Q9UH03 358 aa14.59□□□□□ -0.07
COL6A1-202ENST00000463060 SORCS3Q9UPU3 1222 aa14.59□□□□□ -0.07
COL6A1-202ENST00000463060 MYO18AQ92614 2054 aaKnown RBP14.58□□□□□ -0.08
COL6A1-202ENST00000463060 TARSL2A2RTX5 802 aaKnown RBP14.58□□□□□ -0.08
COL6A1-202ENST00000463060 TBC1D3BA6NDS4 549 aa14.58□□□□□ -0.08
COL6A1-202ENST00000463060 ANTXRLA6NF34 631 aa14.58□□□□□ -0.08
COL6A1-202ENST00000463060 CTIFO43310 598 aaKnown RBP14.58□□□□□ -0.08
COL6A1-202ENST00000463060 TMCC1O94876 653 aa14.58□□□□□ -0.08
COL6A1-202ENST00000463060 HEXIM1O94992 359 aaKnown RBP14.58□□□□□ -0.08
COL6A1-202ENST00000463060 APODP05090 189 aa14.58□□□□□ -0.08
COL6A1-202ENST00000463060 ATP5BP06576 529 aaKnown RBP14.58□□□□□ -0.08
COL6A1-202ENST00000463060 MMP2P08253 660 aa14.58□□□□□ -0.08
COL6A1-202ENST00000463060 HNRNPLP14866 589 aaKnown RBP eCLIP14.58□□□□□ -0.08
COL6A1-202ENST00000463060 KIR2DL1P43626 348 aaPredicted RBP14.58□□□□□ -0.08
COL6A1-202ENST00000463060 RPL21P46778 160 aaKnown RBP14.58□□□□□ -0.08
COL6A1-202ENST00000463060 RGRP47804 291 aa14.58□□□□□ -0.08
COL6A1-202ENST00000463060 STK19P49842 368 aaPredicted RBP14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms