RNA–Protein interactions for RNA: ENST00000463041.1

PTPRF-210, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 3

Gene PTPRF, Length 298 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-210ENST00000463041 CBX4O00257 560 aa7.44□□□□□ -1.22
PTPRF-210ENST00000463041 YKT6O15498 198 aa7.44□□□□□ -1.22
PTPRF-210ENST00000463041 SMAD6O43541 496 aaKnown RBP7.44□□□□□ -1.22
PTPRF-210ENST00000463041 TNFSF14O43557 240 aa7.44□□□□□ -1.22
PTPRF-210ENST00000463041 BNIP3LO60238 219 aa7.44□□□□□ -1.22
PTPRF-210ENST00000463041 RTN2O75298 545 aa7.44□□□□□ -1.22
PTPRF-210ENST00000463041 WNT1P04628 370 aa7.44□□□□□ -1.22
PTPRF-210ENST00000463041 FTH1P19P0C7X4 201 aa7.44□□□□□ -1.22
PTPRF-210ENST00000463041 C1QTNF9P0C862 333 aa7.44□□□□□ -1.22
PTPRF-210ENST00000463041 DESP17661 470 aa7.44□□□□□ -1.22
PTPRF-210ENST00000463041 SPINK2P20155 84 aa7.44□□□□□ -1.22
PTPRF-210ENST00000463041 TNFAIP3P21580 790 aa7.44□□□□□ -1.22
PTPRF-210ENST00000463041 GPD1P21695 349 aa7.44□□□□□ -1.22
PTPRF-210ENST00000463041 RRM1P23921 792 aa7.44□□□□□ -1.22
PTPRF-210ENST00000463041 L1CAMP32004 1257 aa7.44□□□□□ -1.22
PTPRF-210ENST00000463041 MAPKAPK2P49137 400 aa7.44□□□□□ -1.22
PTPRF-210ENST00000463041 CCT8P50990 548 aa7.44□□□□□ -1.22
PTPRF-210ENST00000463041 ZNF143P52747 638 aaPredicted RBP7.44□□□□□ -1.22
PTPRF-210ENST00000463041 METAP1P53582 386 aa7.44□□□□□ -1.22
PTPRF-210ENST00000463041 HDAC4P56524 1084 aa7.44□□□□□ -1.22
PTPRF-210ENST00000463041 GEMIN4P57678 1058 aaKnown RBP7.44□□□□□ -1.22
PTPRF-210ENST00000463041 CDO1Q16878 200 aa7.44□□□□□ -1.22
PTPRF-210ENST00000463041 SETMARQ53H47 684 aaPredicted RBP7.44□□□□□ -1.22
PTPRF-210ENST00000463041 CARD16Q5EG05 197 aa7.44□□□□□ -1.22
PTPRF-210ENST00000463041 ARSIQ5FYB1 569 aa7.44□□□□□ -1.22
PTPRF-210ENST00000463041 MANEALQ5VSG8 457 aa7.44□□□□□ -1.22
PTPRF-210ENST00000463041 AGBL4Q5VU57 503 aa7.44□□□□□ -1.22
PTPRF-210ENST00000463041 NAPEPLDQ6IQ20 393 aa7.44□□□□□ -1.22
PTPRF-210ENST00000463041 RWDD4Q6NW29 188 aaKnown RBP7.44□□□□□ -1.22
PTPRF-210ENST00000463041 SLFN11Q7Z7L1 901 aa7.44□□□□□ -1.22
PTPRF-210ENST00000463041 SLCO6A1Q86UG4 719 aa7.44□□□□□ -1.22
PTPRF-210ENST00000463041 OXR1Q8N573 874 aa7.44□□□□□ -1.22
PTPRF-210ENST00000463041 AOPEPQ8N6M6 819 aa7.44□□□□□ -1.22
PTPRF-210ENST00000463041 PCDH20Q8N6Y1 951 aaKnown RBP7.44□□□□□ -1.22
PTPRF-210ENST00000463041 JOSD2Q8TAC2 188 aa7.44□□□□□ -1.22
PTPRF-210ENST00000463041 BAHD1Q8TBE0 780 aaPredicted RBP7.44□□□□□ -1.22
PTPRF-210ENST00000463041 FAM174AQ8TBP5 190 aa7.44□□□□□ -1.22
PTPRF-210ENST00000463041 FAM172AQ8WUF8 416 aa7.44□□□□□ -1.22
PTPRF-210ENST00000463041 GATA6Q92908 595 aa7.44□□□□□ -1.22
PTPRF-210ENST00000463041 NTAN1Q96AB6 310 aa7.44□□□□□ -1.22
PTPRF-210ENST00000463041 HEPHQ9BQS7 1158 aa7.44□□□□□ -1.22
PTPRF-210ENST00000463041 TMEM121BQ9BXQ6 578 aaPredicted RBP7.44□□□□□ -1.22
PTPRF-210ENST00000463041 HDAC8Q9BY41 377 aa7.44□□□□□ -1.22
PTPRF-210ENST00000463041 ATP13A1Q9HD20 1204 aa7.44□□□□□ -1.22
PTPRF-210ENST00000463041 DYRK4Q9NR20 520 aa7.44□□□□□ -1.22
PTPRF-210ENST00000463041 GDF3Q9NR23 364 aa7.44□□□□□ -1.22
PTPRF-210ENST00000463041 SEPT11Q9NVA2 429 aaKnown RBP7.44□□□□□ -1.22
PTPRF-210ENST00000463041 TMEM248Q9NWD8 314 aa7.44□□□□□ -1.22
PTPRF-210ENST00000463041 DONSONQ9NYP3 566 aa7.44□□□□□ -1.22
PTPRF-210ENST00000463041 TMEM63CQ9P1W3 806 aa7.44□□□□□ -1.22
PTPRF-210ENST00000463041 IL36AQ9UHA7 158 aa7.44□□□□□ -1.22
PTPRF-210ENST00000463041 CHD6Q8TD26 2715 aa7.44□□□□□ -1.22
PTPRF-210ENST00000463041 DSPP15924 2871 aaKnown RBP7.43□□□□□ -1.22
PTPRF-210ENST00000463041 TCRBV5S1A1TA0A578 114 aa7.43□□□□□ -1.22
PTPRF-210ENST00000463041 FAM170AA1A519 330 aa7.43□□□□□ -1.22
PTPRF-210ENST00000463041 ZSCAN5CA6NGD5 496 aaPredicted RBP7.43□□□□□ -1.22
PTPRF-210ENST00000463041 PLK4O00444 970 aa7.43□□□□□ -1.22
PTPRF-210ENST00000463041 KPNA3O00505 521 aaPredicted RBP7.43□□□□□ -1.22
PTPRF-210ENST00000463041 WNT9AO14904 365 aa7.43□□□□□ -1.22
PTPRF-210ENST00000463041 TEX33O43247 280 aa7.43□□□□□ -1.22
PTPRF-210ENST00000463041 KDELR3O43731 214 aa7.43□□□□□ -1.22
PTPRF-210ENST00000463041 ZNF821O75541 412 aaPredicted RBP7.43□□□□□ -1.22
PTPRF-210ENST00000463041 KRT37O76014 449 aa7.43□□□□□ -1.22
PTPRF-210ENST00000463041 LRIG2O94898 1065 aa7.43□□□□□ -1.22
PTPRF-210ENST00000463041 DKK1O94907 266 aa7.43□□□□□ -1.22
PTPRF-210ENST00000463041 POP4O95707 220 aaKnown RBP7.43□□□□□ -1.22
PTPRF-210ENST00000463041 ITGAVP06756 1048 aa7.43□□□□□ -1.22
PTPRF-210ENST00000463041 CTSLP07711 333 aa7.43□□□□□ -1.22
PTPRF-210ENST00000463041 C1SP09871 688 aa7.43□□□□□ -1.22
PTPRF-210ENST00000463041 CDK4P11802 303 aa7.43□□□□□ -1.22
PTPRF-210ENST00000463041 GZMAP12544 262 aa7.43□□□□□ -1.22
PTPRF-210ENST00000463041 ATP1A3P13637 1013 aa7.43□□□□□ -1.22
PTPRF-210ENST00000463041 GLDCP23378 1020 aa7.43□□□□□ -1.22
PTPRF-210ENST00000463041 ARRB1P49407 418 aaPredicted RBP7.43□□□□□ -1.22
PTPRF-210ENST00000463041 SERPINH1P50454 418 aaKnown RBP7.43□□□□□ -1.22
PTPRF-210ENST00000463041 DNA2P51530 1060 aa7.43□□□□□ -1.22
PTPRF-210ENST00000463041 AIF1P55008 147 aa7.43□□□□□ -1.22
PTPRF-210ENST00000463041 NXPH1P58417 271 aa7.43□□□□□ -1.22
PTPRF-210ENST00000463041 YBEYP58557 167 aaPredicted RBP7.43□□□□□ -1.22
PTPRF-210ENST00000463041 TAS2R38P59533 333 aa7.43□□□□□ -1.22
PTPRF-210ENST00000463041 SCAPQ12770 1279 aa7.43□□□□□ -1.22
PTPRF-210ENST00000463041 POLD3Q15054 466 aaPredicted RBP7.43□□□□□ -1.22
PTPRF-210ENST00000463041 ANO6Q4KMQ2 910 aa7.43□□□□□ -1.22
PTPRF-210ENST00000463041 RAB6CQ53S08 254 aa7.43□□□□□ -1.22
PTPRF-210ENST00000463041 PIP5KL1Q5T9C9 394 aa7.43□□□□□ -1.22
PTPRF-210ENST00000463041 DNAJC24Q6P3W2 148 aa7.43□□□□□ -1.22
PTPRF-210ENST00000463041 C22orf39Q6P5X5 142 aa7.43□□□□□ -1.22
PTPRF-210ENST00000463041 DCUN1D2Q6PH85 259 aa7.43□□□□□ -1.22
PTPRF-210ENST00000463041 LAYNQ6UX15 382 aa7.43□□□□□ -1.22
PTPRF-210ENST00000463041 LINGO4Q6UY18 593 aa7.43□□□□□ -1.22
PTPRF-210ENST00000463041 CCNI2Q6ZMN8 369 aaPredicted RBP7.43□□□□□ -1.22
PTPRF-210ENST00000463041 DPY19L3Q6ZPD9 716 aa7.43□□□□□ -1.22
PTPRF-210ENST00000463041 ERN2Q76MJ5 926 aaKnown RBP7.43□□□□□ -1.22
PTPRF-210ENST00000463041 MON1BQ7L1V2 547 aa7.43□□□□□ -1.22
PTPRF-210ENST00000463041 ZSCAN30Q86W11 494 aa7.43□□□□□ -1.22
PTPRF-210ENST00000463041 NLRP14Q86W24 1093 aa7.43□□□□□ -1.22
PTPRF-210ENST00000463041 DCP2Q8IU60 420 aaKnown RBP7.43□□□□□ -1.22
PTPRF-210ENST00000463041 DRC7Q8IY82 874 aa7.43□□□□□ -1.22
PTPRF-210ENST00000463041 MCOLN2Q8IZK6 566 aa7.43□□□□□ -1.22
PTPRF-210ENST00000463041 PNPLA1Q8N8W4 532 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms