RNA–Protein interactions for RNA: ENST00000462494.5

ACTB-207, Transcript of actin beta, humanhuman

TSL 5

Gene ACTB, Length 2,245 nt, Biotype retained intron, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-207ENST00000462494 B3GAT3O94766 335 aa17.2■□□□□ 0.34
ACTB-207ENST00000462494 VAPBO95292 243 aa17.2■□□□□ 0.34
ACTB-207ENST00000462494 POMCP01189 267 aa17.2■□□□□ 0.34
ACTB-207ENST00000462494 AHSGP02765 367 aa17.2■□□□□ 0.34
ACTB-207ENST00000462494 CD1EP15812 388 aa17.2■□□□□ 0.34
ACTB-207ENST00000462494 EPHA3P29320 983 aa17.2■□□□□ 0.34
ACTB-207ENST00000462494 BRCC3P46736 316 aa17.2■□□□□ 0.34
ACTB-207ENST00000462494 CCNHP51946 323 aaPredicted RBP17.2■□□□□ 0.34
ACTB-207ENST00000462494 NAGLUP54802 743 aa17.2■□□□□ 0.34
ACTB-207ENST00000462494 LIPMQ5VYY2 423 aa17.2■□□□□ 0.34
ACTB-207ENST00000462494 PGM2L1Q6PCE3 622 aa17.2■□□□□ 0.34
ACTB-207ENST00000462494 ZYG11AQ6WRX3 759 aa17.2■□□□□ 0.34
ACTB-207ENST00000462494 SPATA6LQ8N4H0 392 aa17.2■□□□□ 0.34
ACTB-207ENST00000462494 RTP3Q9BQQ7 232 aa17.2■□□□□ 0.34
ACTB-207ENST00000462494 RHOJQ9H4E5 214 aa17.2■□□□□ 0.34
ACTB-207ENST00000462494 MID2Q9UJV3 735 aa17.2■□□□□ 0.34
ACTB-207ENST00000462494 POMPQ9Y244 141 aa17.2■□□□□ 0.34
ACTB-207ENST00000462494 SSX2IPQ9Y2D8 614 aa17.2■□□□□ 0.34
ACTB-207ENST00000462494 AAR2Q9Y312 384 aaKnown RBP17.2■□□□□ 0.34
ACTB-207ENST00000462494 MAGEA13PA6NCF6 341 aa17.2■□□□□ 0.34
ACTB-207ENST00000462494 MYADML2A6NDP7 307 aa17.2■□□□□ 0.34
ACTB-207ENST00000462494 AP3B1O00203 1094 aa17.2■□□□□ 0.34
ACTB-207ENST00000462494 PIGNO95427 931 aa17.2■□□□□ 0.34
ACTB-207ENST00000462494 APOA4P06727 396 aa17.2■□□□□ 0.34
ACTB-207ENST00000462494 ODC1P11926 461 aa17.2■□□□□ 0.34
ACTB-207ENST00000462494 GABRB3P28472 473 aa17.2■□□□□ 0.34
ACTB-207ENST00000462494 ZNF135P52742 658 aaPredicted RBP17.2■□□□□ 0.34
ACTB-207ENST00000462494 MPP1Q00013 466 aa17.2■□□□□ 0.34
ACTB-207ENST00000462494 CDC16Q13042 620 aa17.2■□□□□ 0.34
ACTB-207ENST00000462494 UPP1Q16831 310 aa17.2■□□□□ 0.34
ACTB-207ENST00000462494 ARL13AQ5H913 290 aaPredicted RBP17.2■□□□□ 0.34
ACTB-207ENST00000462494 SEL1L3Q68CR1 1132 aa17.2■□□□□ 0.34
ACTB-207ENST00000462494 AGMOQ6ZNB7 445 aa17.2■□□□□ 0.34
ACTB-207ENST00000462494 DHDDSQ86SQ9 333 aa17.2■□□□□ 0.34
ACTB-207ENST00000462494 FBXW8Q8N3Y1 598 aa17.2■□□□□ 0.34
ACTB-207ENST00000462494 FICDQ9BVA6 458 aa17.2■□□□□ 0.34
ACTB-207ENST00000462494 C1QTNF1Q9BXJ1 281 aa17.2■□□□□ 0.34
ACTB-207ENST00000462494 NUF2Q9BZD4 464 aa17.2■□□□□ 0.34
ACTB-207ENST00000462494 CSNK1G1Q9HCP0 422 aa17.2■□□□□ 0.34
ACTB-207ENST00000462494 TMLHEQ9NVH6 421 aa17.2■□□□□ 0.34
ACTB-207ENST00000462494 NSMCE4AQ9NXX6 385 aa17.2■□□□□ 0.34
ACTB-207ENST00000462494 PACSIN3Q9UKS6 424 aa17.2■□□□□ 0.34
ACTB-207ENST00000462494 ANKRD6Q9Y2G4 727 aa17.2■□□□□ 0.34
ACTB-207ENST00000462494 TRPV2Q9Y5S1 764 aa17.2■□□□□ 0.34
ACTB-207ENST00000462494 AIM2O14862 343 aa17.19■□□□□ 0.34
ACTB-207ENST00000462494 PSMD3O43242 534 aa17.19■□□□□ 0.34
ACTB-207ENST00000462494 SLC35E2BP0CK96 405 aa17.19■□□□□ 0.34
ACTB-207ENST00000462494 CRABP2P29373 138 aa17.19■□□□□ 0.34
ACTB-207ENST00000462494 HADHAP40939 763 aa17.19■□□□□ 0.34
ACTB-207ENST00000462494 RPL14P50914 215 aaKnown RBP17.19■□□□□ 0.34
ACTB-207ENST00000462494 SLC12A1Q13621 1099 aa17.19■□□□□ 0.34
ACTB-207ENST00000462494 PCID2Q5JVF3 399 aa17.19■□□□□ 0.34
ACTB-207ENST00000462494 PKN3Q6P5Z2 889 aa17.19■□□□□ 0.34
ACTB-207ENST00000462494 METTL23Q86XA0 190 aa17.19■□□□□ 0.34
ACTB-207ENST00000462494 FSTL5Q8N475 847 aaPredicted RBP17.19■□□□□ 0.34
ACTB-207ENST00000462494 IRGQQ8WZA9 623 aa17.19■□□□□ 0.34
ACTB-207ENST00000462494 DPF3Q92784 378 aa17.19■□□□□ 0.34
ACTB-207ENST00000462494 GATA6Q92908 595 aa17.19■□□□□ 0.34
ACTB-207ENST00000462494 TMEM209Q96SK2 561 aa17.19■□□□□ 0.34
ACTB-207ENST00000462494 DDX50Q9BQ39 737 aaKnown RBP17.19■□□□□ 0.34
ACTB-207ENST00000462494 FTHL17Q9BXU8 183 aa17.19■□□□□ 0.34
ACTB-207ENST00000462494 DRC3Q9H069 523 aa17.19■□□□□ 0.34
ACTB-207ENST00000462494 RAP2CQ9Y3L5 183 aa17.19■□□□□ 0.34
ACTB-207ENST00000462494 CEP350Q5VT06 3117 aa17.19■□□□□ 0.34
ACTB-207ENST00000462494 MATN2O00339 956 aa17.19■□□□□ 0.34
ACTB-207ENST00000462494 BUD23O43709 281 aaKnown RBP17.19■□□□□ 0.34
ACTB-207ENST00000462494 SBK3P0C264 359 aa17.19■□□□□ 0.34
ACTB-207ENST00000462494 BTKQ06187 659 aa17.19■□□□□ 0.34
ACTB-207ENST00000462494 PPM1LQ5SGD2 360 aa17.19■□□□□ 0.34
ACTB-207ENST00000462494 RNF220Q5VTB9 566 aa17.19■□□□□ 0.34
ACTB-207ENST00000462494 METTL21CQ5VZV1 264 aa17.19■□□□□ 0.34
ACTB-207ENST00000462494 LPCAT4Q643R3 524 aa17.19■□□□□ 0.34
ACTB-207ENST00000462494 NXNQ6DKJ4 435 aa17.19■□□□□ 0.34
ACTB-207ENST00000462494 ESRP1Q6NXG1 681 aaKnown RBP17.19■□□□□ 0.34
ACTB-207ENST00000462494 TMEM151AQ8N4L1 468 aa17.19■□□□□ 0.34
ACTB-207ENST00000462494 ZNF419Q96HQ0 510 aaPredicted RBP17.19■□□□□ 0.34
ACTB-207ENST00000462494 RTKNQ9BST9 563 aa17.19■□□□□ 0.34
ACTB-207ENST00000462494 ATXN3LQ9H3M9 355 aa17.19■□□□□ 0.34
ACTB-207ENST00000462494 DMAP1Q9NPF5 467 aaPredicted RBP17.19■□□□□ 0.34
ACTB-207ENST00000462494 SFMBT1Q9UHJ3 866 aa17.19■□□□□ 0.34
ACTB-207ENST00000462494 HDAC3O15379 428 aa17.18■□□□□ 0.34
ACTB-207ENST00000462494 MAP3K13O43283 966 aa17.18■□□□□ 0.34
ACTB-207ENST00000462494 MSI1O43347 362 aaKnown RBP17.18■□□□□ 0.34
ACTB-207ENST00000462494 PMPCBO75439 489 aa17.18■□□□□ 0.34
ACTB-207ENST00000462494 ZCCHC18P0CG32 403 aa17.18■□□□□ 0.34
ACTB-207ENST00000462494 GLDCP23378 1020 aa17.18■□□□□ 0.34
ACTB-207ENST00000462494 CCNCP24863 283 aa17.18■□□□□ 0.34
ACTB-207ENST00000462494 PRDX6P30041 224 aa17.18■□□□□ 0.34
ACTB-207ENST00000462494 HOXC8P31273 242 aa17.18■□□□□ 0.34
ACTB-207ENST00000462494 NUDT2P50583 147 aa17.18■□□□□ 0.34
ACTB-207ENST00000462494 LSM12Q3MHD2 195 aaKnown RBP17.18■□□□□ 0.34
ACTB-207ENST00000462494 OR52E8Q6IFG1 317 aa17.18■□□□□ 0.34
ACTB-207ENST00000462494 RNF111Q6ZNA4 994 aa17.18■□□□□ 0.34
ACTB-207ENST00000462494 TMC7Q7Z402 723 aa17.18■□□□□ 0.34
ACTB-207ENST00000462494 RDH11Q8TC12 318 aa17.18■□□□□ 0.34
ACTB-207ENST00000462494 TSGA13Q96PP4 275 aa17.18■□□□□ 0.34
ACTB-207ENST00000462494 OSBPL2Q9H1P3 480 aa17.18■□□□□ 0.34
ACTB-207ENST00000462494 GLOD4Q9HC38 313 aa17.18■□□□□ 0.34
ACTB-207ENST00000462494 SLC2A6Q9UGQ3 507 aa17.18■□□□□ 0.34
ACTB-207ENST00000462494 ZDHHC2Q9UIJ5 367 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms