RNA–Protein interactions for RNA: ENST00000462421.1

DDX39B-216, Transcript of DExD-box helicase 39B, humanhuman

TSL 3

Gene DDX39B, Length 618 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-216ENST00000462421 MAMLD1Q13495 774 aa9.13□□□□□ -0.95
DDX39B-216ENST00000462421 POM121L1PQ3SYA9 428 aa9.13□□□□□ -0.95
DDX39B-216ENST00000462421 BOLA3Q53S33 107 aa9.13□□□□□ -0.95
DDX39B-216ENST00000462421 TMCO4Q5TGY1 634 aa9.13□□□□□ -0.95
DDX39B-216ENST00000462421 OTUD1Q5VV17 481 aaPredicted RBP9.13□□□□□ -0.95
DDX39B-216ENST00000462421 PEAR1Q5VY43 1037 aaPredicted RBP9.13□□□□□ -0.95
DDX39B-216ENST00000462421 ALKBH5Q6P6C2 394 aaKnown RBP9.13□□□□□ -0.95
DDX39B-216ENST00000462421 H2AFVQ71UI9 128 aa9.13□□□□□ -0.95
DDX39B-216ENST00000462421 ERN2Q76MJ5 926 aaKnown RBP9.13□□□□□ -0.95
DDX39B-216ENST00000462421 APTXQ7Z2E3 356 aaKnown RBP9.13□□□□□ -0.95
DDX39B-216ENST00000462421 ZNF571Q7Z3V5 609 aaPredicted RBP9.13□□□□□ -0.95
DDX39B-216ENST00000462421 PSTKQ8IV42 348 aaKnown RBP9.13□□□□□ -0.95
DDX39B-216ENST00000462421 LZTR1Q8N653 840 aa9.13□□□□□ -0.95
DDX39B-216ENST00000462421 CCDC185Q8N715 623 aa9.13□□□□□ -0.95
DDX39B-216ENST00000462421 OR7D4Q8NG98 312 aa9.13□□□□□ -0.95
DDX39B-216ENST00000462421 OR8K1Q8NGG5 319 aa9.13□□□□□ -0.95
DDX39B-216ENST00000462421 FAM174AQ8TBP5 190 aa9.13□□□□□ -0.95
DDX39B-216ENST00000462421 DNASE2BQ8WZ79 361 aa9.13□□□□□ -0.95
DDX39B-216ENST00000462421 HSPH1Q92598 858 aa9.13□□□□□ -0.95
DDX39B-216ENST00000462421 CENPIQ92674 756 aaPredicted RBP9.13□□□□□ -0.95
DDX39B-216ENST00000462421 PTPRN2Q92932 1015 aa9.13□□□□□ -0.95
DDX39B-216ENST00000462421 RAB7BQ96AH8 199 aa9.13□□□□□ -0.95
DDX39B-216ENST00000462421 MYEOVQ96EZ4 313 aa9.13□□□□□ -0.95
DDX39B-216ENST00000462421 LRIG1Q96JA1 1093 aa9.13□□□□□ -0.95
DDX39B-216ENST00000462421 CDC6Q99741 560 aa9.13□□□□□ -0.95
DDX39B-216ENST00000462421 FUCA2Q9BTY2 467 aa9.13□□□□□ -0.95
DDX39B-216ENST00000462421 CINPQ9BW66 212 aaPredicted RBP9.13□□□□□ -0.95
DDX39B-216ENST00000462421 TM6SF2Q9BZW4 377 aa9.13□□□□□ -0.95
DDX39B-216ENST00000462421 HSD3B7Q9H2F3 369 aa9.13□□□□□ -0.95
DDX39B-216ENST00000462421 TNKS2Q9H2K2 1166 aa9.13□□□□□ -0.95
DDX39B-216ENST00000462421 MTG2Q9H4K7 406 aa9.13□□□□□ -0.95
DDX39B-216ENST00000462421 TMEM74BQ9NUR3 256 aa9.13□□□□□ -0.95
DDX39B-216ENST00000462421 IPO11Q9UI26 975 aaKnown RBP9.13□□□□□ -0.95
DDX39B-216ENST00000462421 ANAPC7Q9UJX3 599 aa9.13□□□□□ -0.95
DDX39B-216ENST00000462421 FZD10Q9ULW2 581 aa9.13□□□□□ -0.95
DDX39B-216ENST00000462421 APOBEC2Q9Y235 224 aaKnown RBP9.13□□□□□ -0.95
DDX39B-216ENST00000462421 FANCMQ8IYD8 2048 aa9.13□□□□□ -0.95
DDX39B-216ENST00000462421 A0A0D9SEW6 157 aa9.12□□□□□ -0.95
DDX39B-216ENST00000462421 A0A1B0GVT2 93 aa9.12□□□□□ -0.95
DDX39B-216ENST00000462421 RASA4BC9J798 803 aa9.12□□□□□ -0.95
DDX39B-216ENST00000462421 PRAMEF26H0Y7S4 382 aa9.12□□□□□ -0.95
DDX39B-216ENST00000462421 FLRT2O43155 660 aa9.12□□□□□ -0.95
DDX39B-216ENST00000462421 RASA4O43374 803 aa9.12□□□□□ -0.95
DDX39B-216ENST00000462421 PLRG1O43660 514 aaKnown RBP9.12□□□□□ -0.95
DDX39B-216ENST00000462421 KDELR3O43731 214 aa9.12□□□□□ -0.95
DDX39B-216ENST00000462421 RNGTTO60942 597 aaKnown RBP9.12□□□□□ -0.95
DDX39B-216ENST00000462421 KCNK5O95279 499 aa9.12□□□□□ -0.95
DDX39B-216ENST00000462421 POP4O95707 220 aaKnown RBP9.12□□□□□ -0.95
DDX39B-216ENST00000462421 GSRP00390 522 aa9.12□□□□□ -0.95
DDX39B-216ENST00000462421 CD38P28907 300 aa9.12□□□□□ -0.95
DDX39B-216ENST00000462421 CASP14P31944 242 aa9.12□□□□□ -0.95
DDX39B-216ENST00000462421 PCK1P35558 622 aa9.12□□□□□ -0.95
DDX39B-216ENST00000462421 GJC1P36383 396 aa9.12□□□□□ -0.95
DDX39B-216ENST00000462421 TNNT3P45378 269 aaPredicted RBP9.12□□□□□ -0.95
DDX39B-216ENST00000462421 CSNK1EP49674 416 aaKnown RBP9.12□□□□□ -0.95
DDX39B-216ENST00000462421 RENBPP51606 427 aa9.12□□□□□ -0.95
DDX39B-216ENST00000462421 NDST2P52849 883 aa9.12□□□□□ -0.95
DDX39B-216ENST00000462421 GALCP54803 685 aa9.12□□□□□ -0.95
DDX39B-216ENST00000462421 RPS21P63220 83 aaKnown RBP9.12□□□□□ -0.95
DDX39B-216ENST00000462421 OVGP1Q12889 678 aa9.12□□□□□ -0.95
DDX39B-216ENST00000462421 ZNF235Q14590 738 aa9.12□□□□□ -0.95
DDX39B-216ENST00000462421 SPA17Q15506 151 aa9.12□□□□□ -0.95
DDX39B-216ENST00000462421 ARSIQ5FYB1 569 aa9.12□□□□□ -0.95
DDX39B-216ENST00000462421 NAPEPLDQ6IQ20 393 aa9.12□□□□□ -0.95
DDX39B-216ENST00000462421 PLEKHA7Q6IQ23 1121 aa9.12□□□□□ -0.95
DDX39B-216ENST00000462421 KIAA1161Q6NSJ0 714 aa9.12□□□□□ -0.95
DDX39B-216ENST00000462421 ERAP2Q6P179 960 aa9.12□□□□□ -0.95
DDX39B-216ENST00000462421 NEK5Q6P3R8 708 aa9.12□□□□□ -0.95
DDX39B-216ENST00000462421 TMCO3Q6UWJ1 677 aa9.12□□□□□ -0.95
DDX39B-216ENST00000462421 NAXDQ8IW45 347 aa9.12□□□□□ -0.95
DDX39B-216ENST00000462421 NDUFAF2Q8N183 169 aa9.12□□□□□ -0.95
DDX39B-216ENST00000462421 TXLNBQ8N3L3 684 aa9.12□□□□□ -0.95
DDX39B-216ENST00000462421 DEFB124Q8NES8 71 aa9.12□□□□□ -0.95
DDX39B-216ENST00000462421 TRAF3IP1Q8TDR0 691 aaPredicted RBP9.12□□□□□ -0.95
DDX39B-216ENST00000462421 CXorf40AQ8TE69 158 aa9.12□□□□□ -0.95
DDX39B-216ENST00000462421 ARHGEF2Q92974 986 aaKnown RBP9.12□□□□□ -0.95
DDX39B-216ENST00000462421 ISG20Q96AZ6 181 aaKnown RBP9.12□□□□□ -0.95
DDX39B-216ENST00000462421 BIRC7Q96CA5 298 aa9.12□□□□□ -0.95
DDX39B-216ENST00000462421 P2RY11Q96G91 374 aa9.12□□□□□ -0.95
DDX39B-216ENST00000462421 FEM1CQ96JP0 617 aa9.12□□□□□ -0.95
DDX39B-216ENST00000462421 LMLNQ96KR4 655 aa9.12□□□□□ -0.95
DDX39B-216ENST00000462421 NUP85Q9BW27 656 aa9.12□□□□□ -0.95
DDX39B-216ENST00000462421 CAPN10Q9HC96 672 aa9.12□□□□□ -0.95
DDX39B-216ENST00000462421 CD248Q9HCU0 757 aa9.12□□□□□ -0.95
DDX39B-216ENST00000462421 TM9SF3Q9HD45 589 aa9.12□□□□□ -0.95
DDX39B-216ENST00000462421 OSGEPQ9NPF4 335 aa9.12□□□□□ -0.95
DDX39B-216ENST00000462421 CD93Q9NPY3 652 aa9.12□□□□□ -0.95
DDX39B-216ENST00000462421 TMPRSS4Q9NRS4 437 aa9.12□□□□□ -0.95
DDX39B-216ENST00000462421 TAS2R14Q9NYV8 317 aa9.12□□□□□ -0.95
DDX39B-216ENST00000462421 ANGPTL2Q9UKU9 493 aa9.12□□□□□ -0.95
DDX39B-216ENST00000462421 ANKRD6Q9Y2G4 727 aa9.12□□□□□ -0.95
DDX39B-216ENST00000462421 FCF1Q9Y324 198 aaKnown RBP9.12□□□□□ -0.95
DDX39B-216ENST00000462421 RIF1Q5UIP0 2472 aaKnown RBP9.12□□□□□ -0.95
DDX39B-216ENST00000462421 AKR1B15C9JRZ8 316 aaPredicted RBP9.11□□□□□ -0.95
DDX39B-216ENST00000462421 H3BM21 787 aa9.11□□□□□ -0.95
DDX39B-216ENST00000462421 DDX3XO00571 662 aaKnown RBP eCLIP9.11□□□□□ -0.95
DDX39B-216ENST00000462421 LEFTY1O75610 366 aa9.11□□□□□ -0.95
DDX39B-216ENST00000462421 PALMO75781 387 aa9.11□□□□□ -0.95
DDX39B-216ENST00000462421 ITGAVP06756 1048 aa9.11□□□□□ -0.95
DDX39B-216ENST00000462421 KRT7P08729 469 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms