RNA–Protein interactions for RNA: ENST00000462122.1

TRAF3IP1-204, Transcript of TRAF3 interacting protein 1, humanhuman

TSL 3

Gene TRAF3IP1, Length 922 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1-204ENST00000462122 ACADMP11310 421 aa11.88□□□□□ -0.51
TRAF3IP1-204ENST00000462122 MX2P20592 715 aa11.88□□□□□ -0.51
TRAF3IP1-204ENST00000462122 CETN2P41208 172 aa11.88□□□□□ -0.51
TRAF3IP1-204ENST00000462122 CDKN2BP42772 138 aa11.88□□□□□ -0.51
TRAF3IP1-204ENST00000462122 RECQLP46063 649 aaPredicted RBP11.88□□□□□ -0.51
TRAF3IP1-204ENST00000462122 MARCKSL1P49006 195 aa11.88□□□□□ -0.51
TRAF3IP1-204ENST00000462122 SFSWAPQ12872 951 aaKnown RBP11.88□□□□□ -0.51
TRAF3IP1-204ENST00000462122 TFDP2Q14188 446 aa11.88□□□□□ -0.51
TRAF3IP1-204ENST00000462122 RFTN1Q14699 578 aaPredicted RBP11.88□□□□□ -0.51
TRAF3IP1-204ENST00000462122 PPP2R5EQ16537 467 aa11.88□□□□□ -0.51
TRAF3IP1-204ENST00000462122 TAZQ16635 292 aa11.88□□□□□ -0.51
TRAF3IP1-204ENST00000462122 TFDP3Q5H9I0 405 aa11.88□□□□□ -0.51
TRAF3IP1-204ENST00000462122 TMCO4Q5TGY1 634 aa11.88□□□□□ -0.51
TRAF3IP1-204ENST00000462122 SLC9A4Q6AI14 798 aa11.88□□□□□ -0.51
TRAF3IP1-204ENST00000462122 MFSD7Q6UXD7 560 aa11.88□□□□□ -0.51
TRAF3IP1-204ENST00000462122 KIAA1324Q6UXG2 1013 aaKnown RBP11.88□□□□□ -0.51
TRAF3IP1-204ENST00000462122 CCDC50Q8IVM0 306 aa11.88□□□□□ -0.51
TRAF3IP1-204ENST00000462122 ATPAF2Q8N5M1 289 aa11.88□□□□□ -0.51
TRAF3IP1-204ENST00000462122 TRIM58Q8NG06 486 aa11.88□□□□□ -0.51
TRAF3IP1-204ENST00000462122 OR8D1Q8WZ84 308 aa11.88□□□□□ -0.51
TRAF3IP1-204ENST00000462122 ZNF830Q96NB3 372 aaPredicted RBP11.88□□□□□ -0.51
TRAF3IP1-204ENST00000462122 ZNF599Q96NL3 588 aa11.88□□□□□ -0.51
TRAF3IP1-204ENST00000462122 PDFQ9HBH1 243 aa11.88□□□□□ -0.51
TRAF3IP1-204ENST00000462122 IPO11Q9UI26 975 aaKnown RBP11.88□□□□□ -0.51
TRAF3IP1-204ENST00000462122 SCML1Q9UN30 329 aa11.88□□□□□ -0.51
TRAF3IP1-204ENST00000462122 MFHAS1Q9Y4C4 1052 aa11.88□□□□□ -0.51
TRAF3IP1-204ENST00000462122 VPS13AQ96RL7 3174 aa11.88□□□□□ -0.51
TRAF3IP1-204ENST00000462122 J3KR12 359 aa11.87□□□□□ -0.51
TRAF3IP1-204ENST00000462122 RPP40O75818 363 aaKnown RBP11.87□□□□□ -0.51
TRAF3IP1-204ENST00000462122 TMCC1O94876 653 aa11.87□□□□□ -0.51
TRAF3IP1-204ENST00000462122 FTCDO95954 541 aa11.87□□□□□ -0.51
TRAF3IP1-204ENST00000462122 ADH1BP00325 375 aa11.87□□□□□ -0.51
TRAF3IP1-204ENST00000462122 GSRP00390 522 aa11.87□□□□□ -0.51
TRAF3IP1-204ENST00000462122 VAV1P15498 845 aa11.87□□□□□ -0.51
TRAF3IP1-204ENST00000462122 P2RY2P41231 377 aa11.87□□□□□ -0.51
TRAF3IP1-204ENST00000462122 NBL1P41271 181 aa11.87□□□□□ -0.51
TRAF3IP1-204ENST00000462122 NR2C2P49116 596 aa11.87□□□□□ -0.51
TRAF3IP1-204ENST00000462122 PEX5P50542 639 aa11.87□□□□□ -0.51
TRAF3IP1-204ENST00000462122 RPS14P62263 151 aaKnown RBP11.87□□□□□ -0.51
TRAF3IP1-204ENST00000462122 SNRPD1P62314 119 aaKnown RBP11.87□□□□□ -0.51
TRAF3IP1-204ENST00000462122 GALNT2Q10471 571 aa11.87□□□□□ -0.51
TRAF3IP1-204ENST00000462122 TTC31Q49AM3 519 aaPredicted RBP11.87□□□□□ -0.51
TRAF3IP1-204ENST00000462122 FAM46CQ5VWP2 391 aa11.87□□□□□ -0.51
TRAF3IP1-204ENST00000462122 SPOCD1Q6ZMY3 1216 aa11.87□□□□□ -0.51
TRAF3IP1-204ENST00000462122 BZW1Q7L1Q6 419 aaKnown RBP11.87□□□□□ -0.51
TRAF3IP1-204ENST00000462122 RFX6Q8HWS3 928 aa11.87□□□□□ -0.51
TRAF3IP1-204ENST00000462122 STK40Q8N2I9 435 aa11.87□□□□□ -0.51
TRAF3IP1-204ENST00000462122 PLD5Q8N7P1 536 aa11.87□□□□□ -0.51
TRAF3IP1-204ENST00000462122 OR2AP1Q8NGE2 309 aa11.87□□□□□ -0.51
TRAF3IP1-204ENST00000462122 OR2A12Q8NGT7 310 aa11.87□□□□□ -0.51
TRAF3IP1-204ENST00000462122 NSMCE1Q8WV22 266 aa11.87□□□□□ -0.51
TRAF3IP1-204ENST00000462122 GAB3Q8WWW8 586 aa11.87□□□□□ -0.51
TRAF3IP1-204ENST00000462122 ERLEC1Q96DZ1 483 aa11.87□□□□□ -0.51
TRAF3IP1-204ENST00000462122 FAM129BQ96TA1 746 aa11.87□□□□□ -0.51
TRAF3IP1-204ENST00000462122 SEMA4AQ9H3S1 761 aa11.87□□□□□ -0.51
TRAF3IP1-204ENST00000462122 MTG2Q9H4K7 406 aa11.87□□□□□ -0.51
TRAF3IP1-204ENST00000462122 USP36Q9P275 1121 aaKnown RBP11.87□□□□□ -0.51
TRAF3IP1-204ENST00000462122 EFR3BQ9Y2G0 817 aa11.87□□□□□ -0.51
TRAF3IP1-204ENST00000462122 FCF1Q9Y324 198 aaKnown RBP11.87□□□□□ -0.51
TRAF3IP1-204ENST00000462122 R4GN57 208 aa11.87□□□□□ -0.51
TRAF3IP1-204ENST00000462122 hCG_1818297A0A087WSY0 165 aa11.86□□□□□ -0.51
TRAF3IP1-204ENST00000462122 C1QTNF3-AMACRE9PGA6 284 aa11.86□□□□□ -0.51
TRAF3IP1-204ENST00000462122 BNIP3LO60238 219 aa11.86□□□□□ -0.51
TRAF3IP1-204ENST00000462122 MAFKO60675 156 aa11.86□□□□□ -0.51
TRAF3IP1-204ENST00000462122 ZNF821O75541 412 aaPredicted RBP11.86□□□□□ -0.51
TRAF3IP1-204ENST00000462122 IGSF6O95976 241 aa11.86□□□□□ -0.51
TRAF3IP1-204ENST00000462122 IL1BP01584 269 aa11.86□□□□□ -0.51
TRAF3IP1-204ENST00000462122 IGLV3-19P01714 112 aa11.86□□□□□ -0.51
TRAF3IP1-204ENST00000462122 TGM2P21980 687 aa11.86□□□□□ -0.51
TRAF3IP1-204ENST00000462122 OXTRP30559 389 aa11.86□□□□□ -0.51
TRAF3IP1-204ENST00000462122 PTPN7P35236 360 aa11.86□□□□□ -0.51
TRAF3IP1-204ENST00000462122 GARSP41250 739 aaKnown RBP11.86□□□□□ -0.51
TRAF3IP1-204ENST00000462122 RHOAP61586 193 aa11.86□□□□□ -0.51
TRAF3IP1-204ENST00000462122 GBE1Q04446 702 aa11.86□□□□□ -0.51
TRAF3IP1-204ENST00000462122 CST6Q15828 149 aa11.86□□□□□ -0.51
TRAF3IP1-204ENST00000462122 MAP7D1Q3KQU3 841 aa11.86□□□□□ -0.51
TRAF3IP1-204ENST00000462122 CARD16Q5EG05 197 aa11.86□□□□□ -0.51
TRAF3IP1-204ENST00000462122 TIGD7Q6NT04 549 aaPredicted RBP11.86□□□□□ -0.51
TRAF3IP1-204ENST00000462122 LEKR1Q6ZMV7 388 aa11.86□□□□□ -0.51
TRAF3IP1-204ENST00000462122 DPY19L3Q6ZPD9 716 aa11.86□□□□□ -0.51
TRAF3IP1-204ENST00000462122 ARHGAP36Q6ZRI8 547 aa11.86□□□□□ -0.51
TRAF3IP1-204ENST00000462122 KBTBD6Q86V97 674 aa11.86□□□□□ -0.51
TRAF3IP1-204ENST00000462122 MMAAQ8IVH4 418 aaKnown RBP11.86□□□□□ -0.51
TRAF3IP1-204ENST00000462122 TP53INP2Q8IXH6 220 aa11.86□□□□□ -0.51
TRAF3IP1-204ENST00000462122 BBS5Q8N3I7 341 aa11.86□□□□□ -0.51
TRAF3IP1-204ENST00000462122 NETO2Q8NC67 525 aa11.86□□□□□ -0.51
TRAF3IP1-204ENST00000462122 ALG3Q92685 438 aa11.86□□□□□ -0.51
TRAF3IP1-204ENST00000462122 FATE1Q969F0 183 aa11.86□□□□□ -0.51
TRAF3IP1-204ENST00000462122 HDAC11Q96DB2 347 aa11.86□□□□□ -0.51
TRAF3IP1-204ENST00000462122 HES6Q96HZ4 224 aa11.86□□□□□ -0.51
TRAF3IP1-204ENST00000462122 LRIG1Q96JA1 1093 aa11.86□□□□□ -0.51
TRAF3IP1-204ENST00000462122 GDAP1L1Q96MZ0 367 aa11.86□□□□□ -0.51
TRAF3IP1-204ENST00000462122 BRD8Q9H0E9 1235 aa11.86□□□□□ -0.51
TRAF3IP1-204ENST00000462122 SLC6A17Q9H1V8 727 aa11.86□□□□□ -0.51
TRAF3IP1-204ENST00000462122 EPC1Q9H2F5 836 aa11.86□□□□□ -0.51
TRAF3IP1-204ENST00000462122 TNKS2Q9H2K2 1166 aa11.86□□□□□ -0.51
TRAF3IP1-204ENST00000462122 ITM2CQ9NQX7 267 aa11.86□□□□□ -0.51
TRAF3IP1-204ENST00000462122 DTLQ9NZJ0 730 aa11.86□□□□□ -0.51
TRAF3IP1-204ENST00000462122 SEPT3Q9UH03 358 aa11.86□□□□□ -0.51
TRAF3IP1-204ENST00000462122 IL36AQ9UHA7 158 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms