RNA–Protein interactions for RNA: ENST00000460827.1

PCYT1A-213, Transcript of phosphate cytidylyltransferase 1, choline, alpha, humanhuman

TSL 2

Gene PCYT1A, Length 562 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCYT1A-213ENST00000460827 RPL34P49207 117 aaKnown RBP11.91□□□□□ -0.5
PCYT1A-213ENST00000460827 IRAK1P51617 712 aa11.91□□□□□ -0.5
PCYT1A-213ENST00000460827 EIF4EBP2Q13542 120 aaPredicted RBP11.91□□□□□ -0.5
PCYT1A-213ENST00000460827 NR0B2Q15466 257 aa11.91□□□□□ -0.5
PCYT1A-213ENST00000460827 CNGA2Q16280 664 aa11.91□□□□□ -0.5
PCYT1A-213ENST00000460827 DEFB133Q30KQ1 61 aa11.91□□□□□ -0.5
PCYT1A-213ENST00000460827 TPRG1LQ5T0D9 272 aa11.91□□□□□ -0.5
PCYT1A-213ENST00000460827 KYAT3Q6YP21 454 aaKnown RBP11.91□□□□□ -0.5
PCYT1A-213ENST00000460827 USP53Q70EK8 1073 aa11.91□□□□□ -0.5
PCYT1A-213ENST00000460827 BEND5Q7L4P6 421 aa11.91□□□□□ -0.5
PCYT1A-213ENST00000460827 PARGQ86W56 976 aa11.91□□□□□ -0.5
PCYT1A-213ENST00000460827 SLC35F3Q8IY50 421 aa11.91□□□□□ -0.5
PCYT1A-213ENST00000460827 SH2D3CQ8N5H7 860 aa11.91□□□□□ -0.5
PCYT1A-213ENST00000460827 OR2A12Q8NGT7 310 aa11.91□□□□□ -0.5
PCYT1A-213ENST00000460827 FAM174AQ8TBP5 190 aa11.91□□□□□ -0.5
PCYT1A-213ENST00000460827 LIN37Q96GY3 246 aaPredicted RBP11.91□□□□□ -0.5
PCYT1A-213ENST00000460827 BOCQ9BWV1 1114 aa11.91□□□□□ -0.5
PCYT1A-213ENST00000460827 SLC25A13Q9UJS0 675 aa11.91□□□□□ -0.5
PCYT1A-213ENST00000460827 ACSL6Q9UKU0 697 aa11.91□□□□□ -0.5
PCYT1A-213ENST00000460827 KCNU1A8MYU2 1149 aa11.9□□□□□ -0.5
PCYT1A-213ENST00000460827 RNF225M0QZC1 329 aaPredicted RBP11.9□□□□□ -0.5
PCYT1A-213ENST00000460827 KPNA3O00505 521 aaPredicted RBP11.9□□□□□ -0.5
PCYT1A-213ENST00000460827 NTN3O00634 580 aaPredicted RBP11.9□□□□□ -0.5
PCYT1A-213ENST00000460827 TPP1O14773 563 aa11.9□□□□□ -0.5
PCYT1A-213ENST00000460827 PLD2O14939 933 aa11.9□□□□□ -0.5
PCYT1A-213ENST00000460827 RAD51BO15315 384 aa11.9□□□□□ -0.5
PCYT1A-213ENST00000460827 SPINT1O43278 529 aa11.9□□□□□ -0.5
PCYT1A-213ENST00000460827 STX10O60499 249 aa11.9□□□□□ -0.5
PCYT1A-213ENST00000460827 RHOBTB3O94955 611 aa11.9□□□□□ -0.5
PCYT1A-213ENST00000460827 PCDH8O95206 1070 aa11.9□□□□□ -0.5
PCYT1A-213ENST00000460827 MT-CO1P00395 513 aa11.9□□□□□ -0.5
PCYT1A-213ENST00000460827 APOEP02649 317 aa11.9□□□□□ -0.5
PCYT1A-213ENST00000460827 PAEPP09466 180 aa11.9□□□□□ -0.5
PCYT1A-213ENST00000460827 GP1BBP13224 206 aa11.9□□□□□ -0.5
PCYT1A-213ENST00000460827 BRD2P25440 801 aaKnown RBP11.9□□□□□ -0.5
PCYT1A-213ENST00000460827 CHRNA3P32297 505 aa11.9□□□□□ -0.5
PCYT1A-213ENST00000460827 YWHAEP62258 255 aaKnown RBP11.9□□□□□ -0.5
PCYT1A-213ENST00000460827 PITX1P78337 314 aaPredicted RBP11.9□□□□□ -0.5
PCYT1A-213ENST00000460827 NUCB2P80303 420 aa11.9□□□□□ -0.5
PCYT1A-213ENST00000460827 CENPCQ03188 943 aa11.9□□□□□ -0.5
PCYT1A-213ENST00000460827 TLE1Q04724 770 aa11.9□□□□□ -0.5
PCYT1A-213ENST00000460827 UBAP2LQ14157 1087 aaKnown RBP11.9□□□□□ -0.5
PCYT1A-213ENST00000460827 TTC39BQ5VTQ0 682 aaPredicted RBP11.9□□□□□ -0.5
PCYT1A-213ENST00000460827 ERICH6BQ5W0A0 696 aa11.9□□□□□ -0.5
PCYT1A-213ENST00000460827 FBXL22Q6P050 247 aa11.9□□□□□ -0.5
PCYT1A-213ENST00000460827 TMEM270Q6UE05 265 aa11.9□□□□□ -0.5
PCYT1A-213ENST00000460827 ERN2Q76MJ5 926 aaKnown RBP11.9□□□□□ -0.5
PCYT1A-213ENST00000460827 B3GNT8Q7Z7M8 397 aa11.9□□□□□ -0.5
PCYT1A-213ENST00000460827 GUF1Q8N442 669 aaKnown RBP11.9□□□□□ -0.5
PCYT1A-213ENST00000460827 TMIEQ8NEW7 156 aa11.9□□□□□ -0.5
PCYT1A-213ENST00000460827 FAM149B1Q96BN6 582 aa11.9□□□□□ -0.5
PCYT1A-213ENST00000460827 ARHGAP9Q9BRR9 750 aa11.9□□□□□ -0.5
PCYT1A-213ENST00000460827 HDAC8Q9BY41 377 aa11.9□□□□□ -0.5
PCYT1A-213ENST00000460827 HS3ST2Q9Y278 367 aa11.9□□□□□ -0.5
PCYT1A-213ENST00000460827 ZFC3H1O60293 1989 aaKnown RBP11.9□□□□□ -0.5
PCYT1A-213ENST00000460827 CLEC18AA5D8T8 446 aa11.89□□□□□ -0.51
PCYT1A-213ENST00000460827 H3BM21 787 aa11.89□□□□□ -0.51
PCYT1A-213ENST00000460827 K7ERQ8 282 aa11.89□□□□□ -0.51
PCYT1A-213ENST00000460827 GCATO75600 419 aa11.89□□□□□ -0.51
PCYT1A-213ENST00000460827 TRUB2O95900 331 aaKnown RBP11.89□□□□□ -0.51
PCYT1A-213ENST00000460827 MYL1P05976 194 aa11.89□□□□□ -0.51
PCYT1A-213ENST00000460827 SFTPCP11686 197 aa11.89□□□□□ -0.51
PCYT1A-213ENST00000460827 SRCP12931 536 aa11.89□□□□□ -0.51
PCYT1A-213ENST00000460827 JUNDP17535 347 aa11.89□□□□□ -0.51
PCYT1A-213ENST00000460827 WT1P19544 449 aaPredicted RBP11.89□□□□□ -0.51
PCYT1A-213ENST00000460827 UGT1A5P35504 534 aa11.89□□□□□ -0.51
PCYT1A-213ENST00000460827 INHBCP55103 352 aa11.89□□□□□ -0.51
PCYT1A-213ENST00000460827 OXCT1P55809 520 aa11.89□□□□□ -0.51
PCYT1A-213ENST00000460827 EIF2B5Q13144 721 aaKnown RBP11.89□□□□□ -0.51
PCYT1A-213ENST00000460827 TBR1Q16650 682 aa11.89□□□□□ -0.51
PCYT1A-213ENST00000460827 EDRF1Q3B7T1 1238 aa11.89□□□□□ -0.51
PCYT1A-213ENST00000460827 FOXD4L6Q3SYB3 417 aaPredicted RBP11.89□□□□□ -0.51
PCYT1A-213ENST00000460827 RABGAP1LQ5R372 815 aa11.89□□□□□ -0.51
PCYT1A-213ENST00000460827 CLEC18BQ6UXF7 455 aa11.89□□□□□ -0.51
PCYT1A-213ENST00000460827 FOXD4L3Q6VB84 417 aaPredicted RBP11.89□□□□□ -0.51
PCYT1A-213ENST00000460827 C14orf80Q86SX3 495 aa11.89□□□□□ -0.51
PCYT1A-213ENST00000460827 CLEC18CQ8NCF0 446 aa11.89□□□□□ -0.51
PCYT1A-213ENST00000460827 CHST14Q8NCH0 376 aa11.89□□□□□ -0.51
PCYT1A-213ENST00000460827 WDR48Q8TAF3 677 aa11.89□□□□□ -0.51
PCYT1A-213ENST00000460827 LMX1AQ8TE12 382 aa11.89□□□□□ -0.51
PCYT1A-213ENST00000460827 KLF6Q99612 283 aaPredicted RBP11.89□□□□□ -0.51
PCYT1A-213ENST00000460827 IL12RB2Q99665 862 aa11.89□□□□□ -0.51
PCYT1A-213ENST00000460827 CCDC3Q9BQI4 270 aa11.89□□□□□ -0.51
PCYT1A-213ENST00000460827 SLC17A9Q9BYT1 436 aa11.89□□□□□ -0.51
PCYT1A-213ENST00000460827 WDR70Q9NW82 654 aa11.89□□□□□ -0.51
PCYT1A-213ENST00000460827 PNMA8BQ9ULN7 279 aaPredicted RBP11.89□□□□□ -0.51
PCYT1A-213ENST00000460827 PCDHGA4Q9Y5G9 962 aa11.89□□□□□ -0.51
PCYT1A-213ENST00000460827 CACNA1DQ01668 2161 aa11.89□□□□□ -0.51
PCYT1A-213ENST00000460827 LRRK1Q38SD2 2015 aa11.89□□□□□ -0.51
PCYT1A-213ENST00000460827 DOCK4Q8N1I0 1966 aa11.88□□□□□ -0.51
PCYT1A-213ENST00000460827 ARHGEF17Q96PE2 2063 aaPredicted RBP11.88□□□□□ -0.51
PCYT1A-213ENST00000460827 SDK2Q58EX2 2172 aa11.88□□□□□ -0.51
PCYT1A-213ENST00000460827 SMAD6O43541 496 aaKnown RBP11.88□□□□□ -0.51
PCYT1A-213ENST00000460827 PAK4O96013 591 aaPredicted RBP11.88□□□□□ -0.51
PCYT1A-213ENST00000460827 TBXAS1P24557 533 aaPredicted RBP11.88□□□□□ -0.51
PCYT1A-213ENST00000460827 RABIFP47224 123 aa11.88□□□□□ -0.51
PCYT1A-213ENST00000460827 CCDC15Q0P6D6 951 aa11.88□□□□□ -0.51
PCYT1A-213ENST00000460827 LRMPQ12912 555 aa11.88□□□□□ -0.51
PCYT1A-213ENST00000460827 SPIDRQ14159 915 aa11.88□□□□□ -0.51
PCYT1A-213ENST00000460827 RAB11FIP2Q7L804 512 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms