RNA–Protein interactions for RNA: ENST00000458038.5

CPNE1-220, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-220ENST00000458038 ACTN2P35609 894 aa22.01■■□□□ 1.11
CPNE1-220ENST00000458038 GGCXP38435 758 aa22.01■■□□□ 1.11
CPNE1-220ENST00000458038 SULT1E1P49888 294 aa22.01■■□□□ 1.11
CPNE1-220ENST00000458038 CLDN6P56747 220 aa22.01■■□□□ 1.11
CPNE1-220ENST00000458038 DAB2P98082 770 aa22.01■■□□□ 1.11
CPNE1-220ENST00000458038 INSM1Q01101 510 aaPredicted RBP22.01■■□□□ 1.11
CPNE1-220ENST00000458038 MAN2A1Q16706 1144 aa22.01■■□□□ 1.11
CPNE1-220ENST00000458038 OTUD1Q5VV17 481 aaPredicted RBP22.01■■□□□ 1.11
CPNE1-220ENST00000458038 MSANTD4Q8NCY6 345 aa22.01■■□□□ 1.11
CPNE1-220ENST00000458038 CEP44Q9C0F1 390 aa22.01■■□□□ 1.11
CPNE1-220ENST00000458038 USP29Q9HBJ7 922 aa22.01■■□□□ 1.11
CPNE1-220ENST00000458038 HS3ST3A1Q9Y663 406 aa22.01■■□□□ 1.11
CPNE1-220ENST00000458038 CXorf51AA0A1B0GTR3 108 aa22■■□□□ 1.11
CPNE1-220ENST00000458038 RIOK3O14730 519 aaKnown RBP22■■□□□ 1.11
CPNE1-220ENST00000458038 TLX3O43711 291 aaPredicted RBP22■■□□□ 1.11
CPNE1-220ENST00000458038 PCDH8O95206 1070 aa22■■□□□ 1.11
CPNE1-220ENST00000458038 PRLRP16471 622 aa22■■□□□ 1.11
CPNE1-220ENST00000458038 RRM1P23921 792 aa22■■□□□ 1.11
CPNE1-220ENST00000458038 C22orf39Q6P5X5 142 aa22■■□□□ 1.11
CPNE1-220ENST00000458038 ABI3BPQ7Z7G0 1075 aa22■■□□□ 1.11
CPNE1-220ENST00000458038 ERICH1Q86X53 443 aa22■■□□□ 1.11
CPNE1-220ENST00000458038 LSM14AQ8ND56 463 aaKnown RBP22■■□□□ 1.11
CPNE1-220ENST00000458038 ARRDC3Q96B67 414 aa22■■□□□ 1.11
CPNE1-220ENST00000458038 FEM1CQ96JP0 617 aa22■■□□□ 1.11
CPNE1-220ENST00000458038 RETREG1Q9H6L5 497 aa22■■□□□ 1.11
CPNE1-220ENST00000458038 CA5BQ9Y2D0 317 aa22■■□□□ 1.11
CPNE1-220ENST00000458038 K7ERQ8 282 aa21.99■■□□□ 1.11
CPNE1-220ENST00000458038 SMAD6O43541 496 aaKnown RBP21.99■■□□□ 1.11
CPNE1-220ENST00000458038 LSM8O95777 96 aaKnown RBP21.99■■□□□ 1.11
CPNE1-220ENST00000458038 CKMT1AP12532 417 aa21.99■■□□□ 1.11
CPNE1-220ENST00000458038 DUSP3P51452 185 aaPredicted RBP21.99■■□□□ 1.11
CPNE1-220ENST00000458038 RPS21P63220 83 aaKnown RBP21.99■■□□□ 1.11
CPNE1-220ENST00000458038 TMEM259Q4ZIN3 620 aa21.99■■□□□ 1.11
CPNE1-220ENST00000458038 ARSIQ5FYB1 569 aa21.99■■□□□ 1.11
CPNE1-220ENST00000458038 FAM102AQ5T9C2 384 aaPredicted RBP21.99■■□□□ 1.11
CPNE1-220ENST00000458038 KIAA1161Q6NSJ0 714 aa21.99■■□□□ 1.11
CPNE1-220ENST00000458038 ARCQ7LC44 396 aa21.99■■□□□ 1.11
CPNE1-220ENST00000458038 PCDH20Q8N6Y1 951 aaKnown RBP21.99■■□□□ 1.11
CPNE1-220ENST00000458038 TBCBQ99426 244 aa21.99■■□□□ 1.11
CPNE1-220ENST00000458038 DUSP23Q9BVJ7 150 aa21.99■■□□□ 1.11
CPNE1-220ENST00000458038 CALN1Q9BXU9 219 aa21.99■■□□□ 1.11
CPNE1-220ENST00000458038 NDST4Q9H3R1 872 aa21.99■■□□□ 1.11
CPNE1-220ENST00000458038 PRORYQ9H606 182 aa21.99■■□□□ 1.11
CPNE1-220ENST00000458038 ANLNQ9NQW6 1124 aa21.99■■□□□ 1.11
CPNE1-220ENST00000458038 NLGN3Q9NZ94 848 aa21.99■■□□□ 1.11
CPNE1-220ENST00000458038 A0A0D9SEW6 157 aa21.98■■□□□ 1.11
CPNE1-220ENST00000458038 A6NNZ2 444 aa21.98■■□□□ 1.11
CPNE1-220ENST00000458038 I6L893 689 aaPredicted RBP21.98■■□□□ 1.11
CPNE1-220ENST00000458038 PIAS2O75928 621 aa21.98■■□□□ 1.11
CPNE1-220ENST00000458038 MT-CO3P00414 261 aa21.98■■□□□ 1.11
CPNE1-220ENST00000458038 GP1BAP07359 652 aa21.98■■□□□ 1.11
CPNE1-220ENST00000458038 TFE3P19532 575 aaPredicted RBP21.98■■□□□ 1.11
CPNE1-220ENST00000458038 ITPKBP27987 946 aa21.98■■□□□ 1.11
CPNE1-220ENST00000458038 ETFBP38117 255 aa21.98■■□□□ 1.11
CPNE1-220ENST00000458038 NEK3P51956 506 aa21.98■■□□□ 1.11
CPNE1-220ENST00000458038 HNRNPKP61978 463 aaKnown RBP eCLIP21.98■■□□□ 1.11
CPNE1-220ENST00000458038 UBE2HP62256 183 aa21.98■■□□□ 1.11
CPNE1-220ENST00000458038 LINGO4Q6UY18 593 aa21.98■■□□□ 1.11
CPNE1-220ENST00000458038 DPY19L3Q6ZPD9 716 aa21.98■■□□□ 1.11
CPNE1-220ENST00000458038 TFAP2DQ7Z6R9 452 aa21.98■■□□□ 1.11
CPNE1-220ENST00000458038 XYLT1Q86Y38 959 aa21.98■■□□□ 1.11
CPNE1-220ENST00000458038 PLPP6Q8IY26 295 aa21.98■■□□□ 1.11
CPNE1-220ENST00000458038 FAM181AQ8N9Y4 354 aa21.98■■□□□ 1.11
CPNE1-220ENST00000458038 OR13H1Q8NG92 308 aa21.98■■□□□ 1.11
CPNE1-220ENST00000458038 KLK6Q92876 244 aa21.98■■□□□ 1.11
CPNE1-220ENST00000458038 MYOCQ99972 504 aa21.98■■□□□ 1.11
CPNE1-220ENST00000458038 HEPHQ9BQS7 1158 aa21.98■■□□□ 1.11
CPNE1-220ENST00000458038 PLCB1Q9NQ66 1216 aa21.98■■□□□ 1.11
CPNE1-220ENST00000458038 MPP6Q9NZW5 540 aa21.98■■□□□ 1.11
CPNE1-220ENST00000458038 AJAP1Q9UKB5 411 aaPredicted RBP21.98■■□□□ 1.11
CPNE1-220ENST00000458038 ZFR2Q9UPR6 939 aaKnown RBP21.98■■□□□ 1.11
CPNE1-220ENST00000458038 AP1G1O43747 822 aa21.97■■□□□ 1.11
CPNE1-220ENST00000458038 BRINP1O60477 761 aa21.97■■□□□ 1.11
CPNE1-220ENST00000458038 LEFTY1O75610 366 aa21.97■■□□□ 1.11
CPNE1-220ENST00000458038 CYP11B1P15538 503 aa21.97■■□□□ 1.11
CPNE1-220ENST00000458038 ITGB7P26010 798 aa21.97■■□□□ 1.11
CPNE1-220ENST00000458038 L1CAMP32004 1257 aa21.97■■□□□ 1.11
CPNE1-220ENST00000458038 SERPINH1P50454 418 aaKnown RBP21.97■■□□□ 1.11
CPNE1-220ENST00000458038 CAMK4Q16566 473 aa21.97■■□□□ 1.11
CPNE1-220ENST00000458038 TBC1D25Q3MII6 688 aa21.97■■□□□ 1.11
CPNE1-220ENST00000458038 LSMEM2Q8N112 164 aa21.97■■□□□ 1.11
CPNE1-220ENST00000458038 CHST14Q8NCH0 376 aa21.97■■□□□ 1.11
CPNE1-220ENST00000458038 GRIN3AQ8TCU5 1115 aa21.97■■□□□ 1.11
CPNE1-220ENST00000458038 CRELD1Q96HD1 420 aa21.97■■□□□ 1.11
CPNE1-220ENST00000458038 SPON2Q9BUD6 331 aa21.97■■□□□ 1.11
CPNE1-220ENST00000458038 SLC17A9Q9BYT1 436 aa21.97■■□□□ 1.11
CPNE1-220ENST00000458038 ZYG11BQ9C0D3 744 aa21.97■■□□□ 1.11
CPNE1-220ENST00000458038 UCKL1Q9NWZ5 548 aa21.97■■□□□ 1.11
CPNE1-220ENST00000458038 PPARGC1AQ9UBK2 798 aaKnown RBP21.97■■□□□ 1.11
CPNE1-220ENST00000458038 WASF2Q9Y6W5 498 aa21.97■■□□□ 1.11
CPNE1-220ENST00000458038 MGAQ8IWI9 3026 aa21.96■■□□□ 1.11
CPNE1-220ENST00000458038 SCAMP1O15126 338 aa21.96■■□□□ 1.11
CPNE1-220ENST00000458038 SRGAP2O75044 1071 aa21.96■■□□□ 1.11
CPNE1-220ENST00000458038 ADRB3P13945 408 aa21.96■■□□□ 1.11
CPNE1-220ENST00000458038 GEMIN4P57678 1058 aaKnown RBP21.96■■□□□ 1.11
CPNE1-220ENST00000458038 RAPGEF1Q13905 1077 aa21.96■■□□□ 1.11
CPNE1-220ENST00000458038 DRAP1Q14919 205 aaPredicted RBP21.96■■□□□ 1.11
CPNE1-220ENST00000458038 VWA3BQ502W6 1294 aa21.96■■□□□ 1.11
CPNE1-220ENST00000458038 GCNT7Q6ZNI0 430 aa21.96■■□□□ 1.11
CPNE1-220ENST00000458038 Q6ZSR6 202 aa21.96■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms