RNA–Protein interactions for RNA: ENST00000458013.6

SNX27-204, Transcript of sorting nexin family member 27, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SNX27, Length 6,403 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-204ENST00000458013 FSTL1Q12841 308 aa19.9■□□□□ 0.78
SNX27-204ENST00000458013 ABCB10Q9NRK6 738 aa19.9■□□□□ 0.78
SNX27-204ENST00000458013 ENTPD4Q9Y227 616 aa19.9■□□□□ 0.78
SNX27-204ENST00000458013 BCLAF3A2AJT9 711 aaKnown RBP19.9■□□□□ 0.78
SNX27-204ENST00000458013 DBTP11182 482 aaKnown RBP19.9■□□□□ 0.78
SNX27-204ENST00000458013 TTC7BQ86TV6 843 aa19.9■□□□□ 0.78
SNX27-204ENST00000458013 ZDHHC13Q8IUH4 622 aa19.9■□□□□ 0.78
SNX27-204ENST00000458013 TNS4Q8IZW8 715 aa19.9■□□□□ 0.78
SNX27-204ENST00000458013 MTG1Q9BT17 334 aaPredicted RBP19.9■□□□□ 0.78
SNX27-204ENST00000458013 SLC12A4Q9UP95 1085 aa19.9■□□□□ 0.78
SNX27-204ENST00000458013 TBL1XO60907 577 aa19.89■□□□□ 0.78
SNX27-204ENST00000458013 SERPINH1P50454 418 aaKnown RBP19.89■□□□□ 0.78
SNX27-204ENST00000458013 RPL14P50914 215 aaKnown RBP19.89■□□□□ 0.78
SNX27-204ENST00000458013 SCNN1GP51170 649 aa19.89■□□□□ 0.78
SNX27-204ENST00000458013 FAM124AQ86V42 546 aa19.89■□□□□ 0.78
SNX27-204ENST00000458013 KCTD4Q8WVF5 259 aa19.89■□□□□ 0.78
SNX27-204ENST00000458013 CENPIQ92674 756 aaPredicted RBP19.89■□□□□ 0.78
SNX27-204ENST00000458013 EXO5Q9H790 373 aa19.89■□□□□ 0.78
SNX27-204ENST00000458013 FAM25EA8MYX2 175 aa19.89■□□□□ 0.77
SNX27-204ENST00000458013 TAF4O00268 1085 aa19.89■□□□□ 0.77
SNX27-204ENST00000458013 RARRES1P49788 294 aa19.89■□□□□ 0.77
SNX27-204ENST00000458013 HYIQ5T013 277 aa19.89■□□□□ 0.77
SNX27-204ENST00000458013 SLC27A1Q6PCB7 646 aa19.89■□□□□ 0.77
SNX27-204ENST00000458013 ACTRT2Q8TDY3 377 aa19.89■□□□□ 0.77
SNX27-204ENST00000458013 SELENOMQ8WWX9 145 aa19.89■□□□□ 0.77
SNX27-204ENST00000458013 S100A13Q99584 98 aa19.89■□□□□ 0.77
SNX27-204ENST00000458013 MIR1-1HGQ9H1L0 117 aa19.89■□□□□ 0.77
SNX27-204ENST00000458013 FANCEQ9HB96 536 aa19.89■□□□□ 0.77
SNX27-204ENST00000458013 SMIM22K7EJ46 135 aa19.89■□□□□ 0.77
SNX27-204ENST00000458013 SNUPNO95149 360 aaKnown RBP19.89■□□□□ 0.77
SNX27-204ENST00000458013 IGFBP4P22692 258 aa19.89■□□□□ 0.77
SNX27-204ENST00000458013 FBXL19Q6PCT2 694 aa19.89■□□□□ 0.77
SNX27-204ENST00000458013 MOSPD2Q8NHP6 518 aa19.89■□□□□ 0.77
SNX27-204ENST00000458013 SLC9A7Q96T83 725 aa19.89■□□□□ 0.77
SNX27-204ENST00000458013 FBXO44Q9H4M3 255 aa19.89■□□□□ 0.77
SNX27-204ENST00000458013 REEP1Q9H902 201 aa19.89■□□□□ 0.77
SNX27-204ENST00000458013 CAB39LQ9H9S4 337 aa19.89■□□□□ 0.77
SNX27-204ENST00000458013 ATG14Q6ZNE5 492 aa19.89■□□□□ 0.77
SNX27-204ENST00000458013 RGL4Q8IZJ4 473 aa19.89■□□□□ 0.77
SNX27-204ENST00000458013 OR6K2Q8NGY2 324 aa19.89■□□□□ 0.77
SNX27-204ENST00000458013 DDX4Q9NQI0 724 aaKnown RBP19.89■□□□□ 0.77
SNX27-204ENST00000458013 ZMYND8Q9ULU4 1186 aaPredicted RBP19.89■□□□□ 0.77
SNX27-204ENST00000458013 TPRKBQ9Y3C4 175 aa19.89■□□□□ 0.77
SNX27-204ENST00000458013 ETS2P15036 469 aa19.89■□□□□ 0.77
SNX27-204ENST00000458013 GRIA4P48058 902 aa19.89■□□□□ 0.77
SNX27-204ENST00000458013 MYBPC2Q14324 1141 aa19.89■□□□□ 0.77
SNX27-204ENST00000458013 ARMC3Q5W041 872 aa19.89■□□□□ 0.77
SNX27-204ENST00000458013 WDR59Q6PJI9 974 aa19.89■□□□□ 0.77
SNX27-204ENST00000458013 FEM1CQ96JP0 617 aa19.89■□□□□ 0.77
SNX27-204ENST00000458013 CYP2A6P11509 494 aaPredicted RBP19.88■□□□□ 0.77
SNX27-204ENST00000458013 PIGKQ92643 395 aa19.88■□□□□ 0.77
SNX27-204ENST00000458013 GMCL1Q96IK5 515 aa19.88■□□□□ 0.77
SNX27-204ENST00000458013 GAD1Q99259 594 aa19.88■□□□□ 0.77
SNX27-204ENST00000458013 GLIS2Q9BZE0 524 aaPredicted RBP19.88■□□□□ 0.77
SNX27-204ENST00000458013 MTAPQ13126 283 aa19.88■□□□□ 0.77
SNX27-204ENST00000458013 ARMC8Q8IUR7 673 aa19.88■□□□□ 0.77
SNX27-204ENST00000458013 DENND6AQ8IWF6 608 aa19.88■□□□□ 0.77
SNX27-204ENST00000458013 PTGR2Q8N8N7 351 aaPredicted RBP19.88■□□□□ 0.77
SNX27-204ENST00000458013 CSGALNACT1Q8TDX6 532 aa19.88■□□□□ 0.77
SNX27-204ENST00000458013 P2RX7Q99572 595 aaKnown RBP19.88■□□□□ 0.77
SNX27-204ENST00000458013 TRIM39Q9HCM9 518 aa19.88■□□□□ 0.77
SNX27-204ENST00000458013 COPG2Q9UBF2 871 aa19.88■□□□□ 0.77
SNX27-204ENST00000458013 ADGRB3O60242 1522 aa19.88■□□□□ 0.77
SNX27-204ENST00000458013 SALL1Q9NSC2 1324 aa19.88■□□□□ 0.77
SNX27-204ENST00000458013 RPL38P63173 70 aaKnown RBP19.88■□□□□ 0.77
SNX27-204ENST00000458013 RAET1GQ6H3X3 334 aa19.88■□□□□ 0.77
SNX27-204ENST00000458013 ZNF544Q6NX49 715 aa19.88■□□□□ 0.77
SNX27-204ENST00000458013 POPDC2Q9HBU9 364 aa19.88■□□□□ 0.77
SNX27-204ENST00000458013 BIKQ13323 160 aa19.88■□□□□ 0.77
SNX27-204ENST00000458013 PARGQ86W56 976 aa19.88■□□□□ 0.77
SNX27-204ENST00000458013 AENQ8WTP8 325 aaKnown RBP19.88■□□□□ 0.77
SNX27-204ENST00000458013 TEKT5Q96M29 485 aa19.88■□□□□ 0.77
SNX27-204ENST00000458013 SLURP2P0DP57 97 aa19.88■□□□□ 0.77
SNX27-204ENST00000458013 SLC15A2Q16348 729 aa19.88■□□□□ 0.77
SNX27-204ENST00000458013 C8orf59Q8N0T1 100 aaPredicted RBP19.88■□□□□ 0.77
SNX27-204ENST00000458013 RECQL4O94761 1208 aa19.87■□□□□ 0.77
SNX27-204ENST00000458013 ZNF268Q14587 947 aaPredicted RBP19.87■□□□□ 0.77
SNX27-204ENST00000458013 KIAA0408Q6ZU52 694 aa19.87■□□□□ 0.77
SNX27-204ENST00000458013 AMIGO2Q86SJ2 522 aa19.87■□□□□ 0.77
SNX27-204ENST00000458013 EXOC3L1Q86VI1 746 aa19.87■□□□□ 0.77
SNX27-204ENST00000458013 C9orf16Q9BUW7 83 aa19.87■□□□□ 0.77
SNX27-204ENST00000458013 THG1LQ9NWX6 298 aaKnown RBP19.87■□□□□ 0.77
SNX27-204ENST00000458013 ARHGAP28Q9P2N2 729 aa19.87■□□□□ 0.77
SNX27-204ENST00000458013 ANAPC2Q9UJX6 822 aa19.87■□□□□ 0.77
SNX27-204ENST00000458013 STON1Q9Y6Q2 735 aa19.87■□□□□ 0.77
SNX27-204ENST00000458013 TCRBV5S4A2TA0A5A2 114 aa19.87■□□□□ 0.77
SNX27-204ENST00000458013 HOXA2O43364 376 aa19.87■□□□□ 0.77
SNX27-204ENST00000458013 TCEA3O75764 348 aa19.87■□□□□ 0.77
SNX27-204ENST00000458013 KRT36O76013 467 aa19.87■□□□□ 0.77
SNX27-204ENST00000458013 CTSEP14091 401 aa19.87■□□□□ 0.77
SNX27-204ENST00000458013 HNRNPLP14866 589 aaKnown RBP eCLIP19.87■□□□□ 0.77
SNX27-204ENST00000458013 MAGP20916 626 aa19.87■□□□□ 0.77
SNX27-204ENST00000458013 NRG1Q02297 640 aaPredicted RBP19.87■□□□□ 0.77
SNX27-204ENST00000458013 POMZP3Q6PJE2 187 aa19.87■□□□□ 0.77
SNX27-204ENST00000458013 EIF3MQ7L2H7 374 aaKnown RBP19.87■□□□□ 0.77
SNX27-204ENST00000458013 COLGALT2Q8IYK4 626 aa19.87■□□□□ 0.77
SNX27-204ENST00000458013 SERPINB11Q96P15 392 aa19.87■□□□□ 0.77
SNX27-204ENST00000458013 ADAM2Q99965 735 aa19.87■□□□□ 0.77
SNX27-204ENST00000458013 TLR10Q9BXR5 811 aa19.87■□□□□ 0.77
SNX27-204ENST00000458013 ASB8Q9H765 288 aa19.87■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms