RNA–Protein interactions for RNA: ENST00000457942.1

CHCHD3-204, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 4

Gene CHCHD3, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-204ENST00000457942 YKT6O15498 198 aa16.11■□□□□ 0.17
CHCHD3-204ENST00000457942 MT-CO1P00395 513 aa16.11■□□□□ 0.17
CHCHD3-204ENST00000457942 HNF1BP35680 557 aa16.11■□□□□ 0.17
CHCHD3-204ENST00000457942 SOX5P35711 763 aa16.11■□□□□ 0.17
CHCHD3-204ENST00000457942 ARRB1P49407 418 aaPredicted RBP16.11■□□□□ 0.17
CHCHD3-204ENST00000457942 CDR2Q01850 454 aa16.11■□□□□ 0.17
CHCHD3-204ENST00000457942 CCDC15Q0P6D6 951 aa16.11■□□□□ 0.17
CHCHD3-204ENST00000457942 SYCP1Q15431 976 aa16.11■□□□□ 0.17
CHCHD3-204ENST00000457942 ARL13BQ3SXY8 428 aa16.11■□□□□ 0.17
CHCHD3-204ENST00000457942 SETMARQ53H47 684 aaPredicted RBP16.11■□□□□ 0.17
CHCHD3-204ENST00000457942 HES3Q5TGS1 186 aa16.11■□□□□ 0.17
CHCHD3-204ENST00000457942 AGBL4Q5VU57 503 aa16.11■□□□□ 0.17
CHCHD3-204ENST00000457942 CDKAL1Q5VV42 579 aa16.11■□□□□ 0.17
CHCHD3-204ENST00000457942 DRC7Q8IY82 874 aa16.11■□□□□ 0.17
CHCHD3-204ENST00000457942 OR7D4Q8NG98 312 aa16.11■□□□□ 0.17
CHCHD3-204ENST00000457942 GRIN3AQ8TCU5 1115 aa16.11■□□□□ 0.17
CHCHD3-204ENST00000457942 CNDP2Q96KP4 475 aaKnown RBP16.11■□□□□ 0.17
CHCHD3-204ENST00000457942 C1orf74Q96LT6 269 aa16.11■□□□□ 0.17
CHCHD3-204ENST00000457942 ZYG11BQ9C0D3 744 aa16.11■□□□□ 0.17
CHCHD3-204ENST00000457942 TNKS2Q9H2K2 1166 aa16.11■□□□□ 0.17
CHCHD3-204ENST00000457942 ATP13A1Q9HD20 1204 aa16.11■□□□□ 0.17
CHCHD3-204ENST00000457942 SEPT11Q9NVA2 429 aaKnown RBP16.11■□□□□ 0.17
CHCHD3-204ENST00000457942 NOCTQ9UK39 431 aaKnown RBP16.11■□□□□ 0.17
CHCHD3-204ENST00000457942 PPM1HQ9ULR3 514 aa16.11■□□□□ 0.17
CHCHD3-204ENST00000457942 DOCK9Q9BZ29 2069 aa16.1■□□□□ 0.17
CHCHD3-204ENST00000457942 DRGXA6NNA5 263 aa16.1■□□□□ 0.17
CHCHD3-204ENST00000457942 K7ERQ8 282 aa16.1■□□□□ 0.17
CHCHD3-204ENST00000457942 TLR4O00206 839 aa16.1■□□□□ 0.17
CHCHD3-204ENST00000457942 RRP8O43159 456 aaKnown RBP16.1■□□□□ 0.17
CHCHD3-204ENST00000457942 LATO43561 262 aa16.1■□□□□ 0.17
CHCHD3-204ENST00000457942 ENDOD1O94919 500 aa16.1■□□□□ 0.17
CHCHD3-204ENST00000457942 PRNPP04156 253 aa16.1■□□□□ 0.17
CHCHD3-204ENST00000457942 SDC4P31431 198 aa16.1■□□□□ 0.17
CHCHD3-204ENST00000457942 CHRNA3P32297 505 aa16.1■□□□□ 0.17
CHCHD3-204ENST00000457942 NUDT1P36639 197 aa16.1■□□□□ 0.17
CHCHD3-204ENST00000457942 STAT1P42224 750 aa16.1■□□□□ 0.17
CHCHD3-204ENST00000457942 DNA2P51530 1060 aa16.1■□□□□ 0.17
CHCHD3-204ENST00000457942 CLCN6P51797 869 aa16.1■□□□□ 0.17
CHCHD3-204ENST00000457942 NXPH1P58417 271 aa16.1■□□□□ 0.17
CHCHD3-204ENST00000457942 CCDC173Q0VFZ6 552 aa16.1■□□□□ 0.17
CHCHD3-204ENST00000457942 TARDBPQ13148 414 aaKnown RBP eCLIP16.1■□□□□ 0.178e-6■■■□□ 18.9
CHCHD3-204ENST00000457942 STAT4Q14765 748 aa16.1■□□□□ 0.17
CHCHD3-204ENST00000457942 TRNP1Q6NT89 227 aa16.1■□□□□ 0.17
CHCHD3-204ENST00000457942 RETSATQ6NUM9 610 aa16.1■□□□□ 0.17
CHCHD3-204ENST00000457942 C22orf39Q6P5X5 142 aa16.1■□□□□ 0.17
CHCHD3-204ENST00000457942 CLEC17AQ6ZS10 378 aa16.1■□□□□ 0.17
CHCHD3-204ENST00000457942 TMPRSS12Q86WS5 348 aa16.1■□□□□ 0.17
CHCHD3-204ENST00000457942 ZNF683Q8IZ20 524 aa16.1■□□□□ 0.17
CHCHD3-204ENST00000457942 OXR1Q8N573 874 aa16.1■□□□□ 0.17
CHCHD3-204ENST00000457942 NEK11Q8NG66 645 aa16.1■□□□□ 0.17
CHCHD3-204ENST00000457942 SLC30A5Q8TAD4 765 aa16.1■□□□□ 0.17
CHCHD3-204ENST00000457942 HAPLN3Q96S86 360 aa16.1■□□□□ 0.17
CHCHD3-204ENST00000457942 MYOCQ99972 504 aa16.1■□□□□ 0.17
CHCHD3-204ENST00000457942 PREBQ9HCU5 417 aa16.1■□□□□ 0.17
CHCHD3-204ENST00000457942 ANO10Q9NW15 660 aa16.1■□□□□ 0.17
CHCHD3-204ENST00000457942 FANCLQ9NW38 375 aa16.1■□□□□ 0.17
CHCHD3-204ENST00000457942 TMEM59LQ9UK28 342 aa16.1■□□□□ 0.17
CHCHD3-204ENST00000457942 DMTF1Q9Y222 760 aa16.1■□□□□ 0.17
CHCHD3-204ENST00000457942 MGAQ8IWI9 3026 aa16.09■□□□□ 0.17
CHCHD3-204ENST00000457942 A0A1W2PR77 199 aa16.09■□□□□ 0.17
CHCHD3-204ENST00000457942 ILVBLA1L0T0 632 aa16.09■□□□□ 0.17
CHCHD3-204ENST00000457942 TK2O00142 265 aa16.09■□□□□ 0.17
CHCHD3-204ENST00000457942 SMAD6O43541 496 aaKnown RBP16.09■□□□□ 0.17
CHCHD3-204ENST00000457942 MAGEC1O60732 1142 aa16.09■□□□□ 0.17
CHCHD3-204ENST00000457942 RNGTTO60942 597 aaKnown RBP16.09■□□□□ 0.17
CHCHD3-204ENST00000457942 RFPL3O75679 317 aa16.09■□□□□ 0.17
CHCHD3-204ENST00000457942 CTSLP07711 333 aa16.09■□□□□ 0.17
CHCHD3-204ENST00000457942 CDK11BP21127 795 aaKnown RBP16.09■□□□□ 0.17
CHCHD3-204ENST00000457942 GLDCP23378 1020 aa16.09■□□□□ 0.17
CHCHD3-204ENST00000457942 EPHA8P29322 1005 aaPredicted RBP16.09■□□□□ 0.17
CHCHD3-204ENST00000457942 NSFP46459 744 aaKnown RBP16.09■□□□□ 0.17
CHCHD3-204ENST00000457942 COPB1P53618 953 aaKnown RBP16.09■□□□□ 0.17
CHCHD3-204ENST00000457942 CXADRP78310 365 aa16.09■□□□□ 0.17
CHCHD3-204ENST00000457942 FMO1Q01740 532 aa16.09■□□□□ 0.17
CHCHD3-204ENST00000457942 STX1AQ16623 288 aa16.09■□□□□ 0.17
CHCHD3-204ENST00000457942 C15orf59Q2T9L4 293 aaPredicted RBP16.09■□□□□ 0.17
CHCHD3-204ENST00000457942 RWDD4Q6NW29 188 aaKnown RBP16.09■□□□□ 0.17
CHCHD3-204ENST00000457942 TRIM72Q6ZMU5 477 aa16.09■□□□□ 0.17
CHCHD3-204ENST00000457942 TRIM69Q86WT6 500 aa16.09■□□□□ 0.17
CHCHD3-204ENST00000457942 MFSD2AQ8NA29 543 aa16.09■□□□□ 0.17
CHCHD3-204ENST00000457942 CHST14Q8NCH0 376 aa16.09■□□□□ 0.17
CHCHD3-204ENST00000457942 OR2A12Q8NGT7 310 aa16.09■□□□□ 0.17
CHCHD3-204ENST00000457942 GPT2Q8TD30 523 aa16.09■□□□□ 0.17
CHCHD3-204ENST00000457942 RXFP2Q8WXD0 754 aa16.09■□□□□ 0.17
CHCHD3-204ENST00000457942 PPP1R16AQ96I34 528 aa16.09■□□□□ 0.17
CHCHD3-204ENST00000457942 IL36AQ9UHA7 158 aa16.09■□□□□ 0.17
CHCHD3-204ENST00000457942 DAAM1Q9Y4D1 1078 aa16.09■□□□□ 0.17
CHCHD3-204ENST00000457942 IGLV3-10A0A075B6K4 115 aa16.08■□□□□ 0.16
CHCHD3-204ENST00000457942 EPHB6O15197 1021 aa16.08■□□□□ 0.16
CHCHD3-204ENST00000457942 SLC31A1O15431 190 aa16.08■□□□□ 0.16
CHCHD3-204ENST00000457942 PCDH8O95206 1070 aa16.08■□□□□ 0.16
CHCHD3-204ENST00000457942 GJB6O95452 261 aa16.08■□□□□ 0.16
CHCHD3-204ENST00000457942 LDOC1O95751 146 aaPredicted RBP16.08■□□□□ 0.16
CHCHD3-204ENST00000457942 CYP1A1P04798 512 aaPredicted RBP16.08■□□□□ 0.16
CHCHD3-204ENST00000457942 PRLRP16471 622 aa16.08■□□□□ 0.16
CHCHD3-204ENST00000457942 MMP8P22894 467 aa16.08■□□□□ 0.16
CHCHD3-204ENST00000457942 JAM2P57087 298 aa16.08■□□□□ 0.16
CHCHD3-204ENST00000457942 MYL5Q02045 173 aa16.08■□□□□ 0.16
CHCHD3-204ENST00000457942 UBXN1Q04323 297 aa16.08■□□□□ 0.16
CHCHD3-204ENST00000457942 PIP5KL1Q5T9C9 394 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms