RNA–Protein interactions for RNA: ENST00000457035.5

ATG4A-206, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 939 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-206ENST00000457035 LRRD1A4D1F6 860 aa10.26□□□□□ -0.77
ATG4A-206ENST00000457035 ZNF487B1APH4 448 aa10.26□□□□□ -0.77
ATG4A-206ENST00000457035 AXIN1O15169 862 aa10.26□□□□□ -0.77
ATG4A-206ENST00000457035 KRT86O43790 486 aa10.26□□□□□ -0.77
ATG4A-206ENST00000457035 NRDCO43847 1150 aa10.26□□□□□ -0.77
ATG4A-206ENST00000457035 SYNCRIPO60506 623 aaKnown RBP10.26□□□□□ -0.77
ATG4A-206ENST00000457035 LILRB5O75023 590 aa10.26□□□□□ -0.77
ATG4A-206ENST00000457035 SIN3BO75182 1162 aa10.26□□□□□ -0.77
ATG4A-206ENST00000457035 PALMO75781 387 aa10.26□□□□□ -0.77
ATG4A-206ENST00000457035 ALDH1A2O94788 518 aa10.26□□□□□ -0.77
ATG4A-206ENST00000457035 CCDC175P0C221 793 aa10.26□□□□□ -0.77
ATG4A-206ENST00000457035 TNNT1P13805 278 aa10.26□□□□□ -0.77
ATG4A-206ENST00000457035 VAV1P15498 845 aa10.26□□□□□ -0.77
ATG4A-206ENST00000457035 NDUFV2P19404 249 aa10.26□□□□□ -0.77
ATG4A-206ENST00000457035 MLLT3P42568 568 aaPredicted RBP10.26□□□□□ -0.77
ATG4A-206ENST00000457035 ID4P47928 161 aa10.26□□□□□ -0.77
ATG4A-206ENST00000457035 PEX5P50542 639 aa10.26□□□□□ -0.77
ATG4A-206ENST00000457035 PAPOLAP51003 745 aaKnown RBP10.26□□□□□ -0.77
ATG4A-206ENST00000457035 STARD3Q14849 445 aa10.26□□□□□ -0.77
ATG4A-206ENST00000457035 TAZQ16635 292 aa10.26□□□□□ -0.77
ATG4A-206ENST00000457035 IFI16Q16666 785 aaKnown RBP10.26□□□□□ -0.77
ATG4A-206ENST00000457035 ANO7Q6IWH7 933 aa10.26□□□□□ -0.77
ATG4A-206ENST00000457035 RETSATQ6NUM9 610 aa10.26□□□□□ -0.77
ATG4A-206ENST00000457035 TMCO3Q6UWJ1 677 aa10.26□□□□□ -0.77
ATG4A-206ENST00000457035 MFSD7Q6UXD7 560 aa10.26□□□□□ -0.77
ATG4A-206ENST00000457035 NT5DC3Q86UY8 548 aa10.26□□□□□ -0.77
ATG4A-206ENST00000457035 WDR5BQ86VZ2 330 aa10.26□□□□□ -0.77
ATG4A-206ENST00000457035 LONP2Q86WA8 852 aa10.26□□□□□ -0.77
ATG4A-206ENST00000457035 TMPRSS6Q8IU80 811 aa10.26□□□□□ -0.77
ATG4A-206ENST00000457035 ATP11CQ8NB49 1132 aa10.26□□□□□ -0.77
ATG4A-206ENST00000457035 OR2T3Q8NH03 318 aa10.26□□□□□ -0.77
ATG4A-206ENST00000457035 HMGB4Q8WW32 186 aa10.26□□□□□ -0.77
ATG4A-206ENST00000457035 KRT35Q92764 455 aa10.26□□□□□ -0.77
ATG4A-206ENST00000457035 WNT2BQ93097 391 aa10.26□□□□□ -0.77
ATG4A-206ENST00000457035 MRGPRX1Q96LB2 322 aa10.26□□□□□ -0.77
ATG4A-206ENST00000457035 RNF157Q96PX1 679 aa10.26□□□□□ -0.77
ATG4A-206ENST00000457035 CALN1Q9BXU9 219 aa10.26□□□□□ -0.77
ATG4A-206ENST00000457035 TSGA10Q9BZW7 698 aa10.26□□□□□ -0.77
ATG4A-206ENST00000457035 SLC6A17Q9H1V8 727 aa10.26□□□□□ -0.77
ATG4A-206ENST00000457035 DDX56Q9NY93 547 aaKnown RBP10.26□□□□□ -0.77
ATG4A-206ENST00000457035 HPCAL4Q9UM19 191 aa10.26□□□□□ -0.77
ATG4A-206ENST00000457035 GUCA1BQ9UMX6 200 aa10.26□□□□□ -0.77
ATG4A-206ENST00000457035 PCDHGA2Q9Y5H1 932 aa10.26□□□□□ -0.77
ATG4A-206ENST00000457035 PCDHA3Q9Y5H8 950 aa10.26□□□□□ -0.77
ATG4A-206ENST00000457035 TRPM6Q9BX84 2022 aa10.26□□□□□ -0.77
ATG4A-206ENST00000457035 ZSCAN5CA6NGD5 496 aaPredicted RBP10.25□□□□□ -0.77
ATG4A-206ENST00000457035 ARHGAP42A6NI28 874 aa10.25□□□□□ -0.77
ATG4A-206ENST00000457035 J3KR12 359 aa10.25□□□□□ -0.77
ATG4A-206ENST00000457035 ZRANB2O95218 330 aaKnown RBP eCLIP10.25□□□□□ -0.77
ATG4A-206ENST00000457035 LMNAP02545 664 aaKnown RBP10.25□□□□□ -0.77
ATG4A-206ENST00000457035 CTNNA1P35221 906 aaKnown RBP10.25□□□□□ -0.77
ATG4A-206ENST00000457035 MARCKSL1P49006 195 aa10.25□□□□□ -0.77
ATG4A-206ENST00000457035 SERPINH1P50454 418 aaKnown RBP10.25□□□□□ -0.77
ATG4A-206ENST00000457035 SLC10A2Q12908 348 aaPredicted RBP10.25□□□□□ -0.77
ATG4A-206ENST00000457035 PAFAH1B3Q15102 231 aaKnown RBP10.25□□□□□ -0.77
ATG4A-206ENST00000457035 ACCSLQ4AC99 568 aa10.25□□□□□ -0.77
ATG4A-206ENST00000457035 INO80DQ53TQ3 878 aaPredicted RBP10.25□□□□□ -0.77
ATG4A-206ENST00000457035 ZFYVE27Q5T4F4 411 aa10.25□□□□□ -0.77
ATG4A-206ENST00000457035 NCBP2-AS2Q69YL0 99 aa10.25□□□□□ -0.77
ATG4A-206ENST00000457035 LEKR1Q6ZMV7 388 aa10.25□□□□□ -0.77
ATG4A-206ENST00000457035 ARHGAP36Q6ZRI8 547 aa10.25□□□□□ -0.77
ATG4A-206ENST00000457035 METTL3Q86U44 580 aaKnown RBP10.25□□□□□ -0.77
ATG4A-206ENST00000457035 KIAA2013Q8IYS2 634 aa10.25□□□□□ -0.77
ATG4A-206ENST00000457035 KATNAL2Q8IYT4 538 aa10.25□□□□□ -0.77
ATG4A-206ENST00000457035 RCOR2Q8IZ40 523 aa10.25□□□□□ -0.77
ATG4A-206ENST00000457035 EXD1Q8NHP7 514 aa10.25□□□□□ -0.77
ATG4A-206ENST00000457035 ISG20Q96AZ6 181 aaKnown RBP10.25□□□□□ -0.77
ATG4A-206ENST00000457035 RSPH9Q9H1X1 276 aaPredicted RBP10.25□□□□□ -0.77
ATG4A-206ENST00000457035 PRDM16Q9HAZ2 1276 aa10.25□□□□□ -0.77
ATG4A-206ENST00000457035 PDFQ9HBH1 243 aa10.25□□□□□ -0.77
ATG4A-206ENST00000457035 AMFRQ9UKV5 643 aa10.25□□□□□ -0.77
ATG4A-206ENST00000457035 PPP2R2CQ9Y2T4 447 aa10.25□□□□□ -0.77
ATG4A-206ENST00000457035 CAPN6Q9Y6Q1 641 aa10.25□□□□□ -0.77
ATG4A-206ENST00000457035 CCDC66A2RUB6 948 aa10.24□□□□□ -0.77
ATG4A-206ENST00000457035 DFFAO00273 331 aa10.24□□□□□ -0.77
ATG4A-206ENST00000457035 MCF2LO15068 1137 aa10.24□□□□□ -0.77
ATG4A-206ENST00000457035 ZBTB24O43167 697 aaPredicted RBP10.24□□□□□ -0.77
ATG4A-206ENST00000457035 MAFKO60675 156 aa10.24□□□□□ -0.77
ATG4A-206ENST00000457035 PRAMEF11O60813 436 aa10.24□□□□□ -0.77
ATG4A-206ENST00000457035 PEX11BO96011 259 aa10.24□□□□□ -0.77
ATG4A-206ENST00000457035 KRT1P04264 644 aa10.24□□□□□ -0.77
ATG4A-206ENST00000457035 PTMAP06454 111 aaKnown RBP10.24□□□□□ -0.77
ATG4A-206ENST00000457035 CTNNA2P26232 953 aa10.24□□□□□ -0.77
ATG4A-206ENST00000457035 CNR2P34972 360 aa10.24□□□□□ -0.77
ATG4A-206ENST00000457035 CDKN2BP42772 138 aa10.24□□□□□ -0.77
ATG4A-206ENST00000457035 PRSS12P56730 875 aa10.24□□□□□ -0.77
ATG4A-206ENST00000457035 GEMIN4P57678 1058 aaKnown RBP10.24□□□□□ -0.77
ATG4A-206ENST00000457035 RPS14P62263 151 aaKnown RBP10.24□□□□□ -0.77
ATG4A-206ENST00000457035 SRSF5Q13243 272 aaKnown RBP10.24□□□□□ -0.77
ATG4A-206ENST00000457035 CYTH1Q15438 398 aa10.24□□□□□ -0.77
ATG4A-206ENST00000457035 MAP7D1Q3KQU3 841 aa10.24□□□□□ -0.77
ATG4A-206ENST00000457035 SLC9A4Q6AI14 798 aa10.24□□□□□ -0.77
ATG4A-206ENST00000457035 ZC3H14Q6PJT7 736 aaKnown RBP10.24□□□□□ -0.77
ATG4A-206ENST00000457035 THSD4Q6ZMP0 1018 aa10.24□□□□□ -0.77
ATG4A-206ENST00000457035 Q6ZVU0 165 aa10.24□□□□□ -0.77
ATG4A-206ENST00000457035 PEX26Q7Z412 305 aa10.24□□□□□ -0.77
ATG4A-206ENST00000457035 SYCE1Q8N0S2 351 aa10.24□□□□□ -0.77
ATG4A-206ENST00000457035 STK40Q8N2I9 435 aa10.24□□□□□ -0.77
ATG4A-206ENST00000457035 PGBD3Q8N328 593 aa10.24□□□□□ -0.77
ATG4A-206ENST00000457035 PLD5Q8N7P1 536 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms