RNA–Protein interactions for RNA: ENST00000456246.1

MSH6-207, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 846 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-207ENST00000456246 KPNA3O00505 521 aaPredicted RBP18.24■□□□□ 0.51
MSH6-207ENST00000456246 YKT6O15498 198 aa18.24■□□□□ 0.51
MSH6-207ENST00000456246 CCP110O43303 1012 aa18.24■□□□□ 0.51
MSH6-207ENST00000456246 SMAD6O43541 496 aaKnown RBP18.24■□□□□ 0.51
MSH6-207ENST00000456246 PCDHGA12O60330 932 aa18.24■□□□□ 0.51
MSH6-207ENST00000456246 MAGEC1O60732 1142 aa18.24■□□□□ 0.51
MSH6-207ENST00000456246 RAMP2O60895 175 aa18.24■□□□□ 0.51
MSH6-207ENST00000456246 RTN2O75298 545 aa18.24■□□□□ 0.51
MSH6-207ENST00000456246 CD38P28907 300 aa18.24■□□□□ 0.51
MSH6-207ENST00000456246 HTR7P34969 479 aa18.24■□□□□ 0.51
MSH6-207ENST00000456246 PRKCIP41743 596 aa18.24■□□□□ 0.51
MSH6-207ENST00000456246 OVGP1Q12889 678 aa18.24■□□□□ 0.51
MSH6-207ENST00000456246 RAB6CQ53S08 254 aa18.24■□□□□ 0.51
MSH6-207ENST00000456246 SFMBT2Q5VUG0 894 aa18.24■□□□□ 0.51
MSH6-207ENST00000456246 NAPEPLDQ6IQ20 393 aa18.24■□□□□ 0.51
MSH6-207ENST00000456246 IQCHQ86VS3 1027 aa18.24■□□□□ 0.51
MSH6-207ENST00000456246 PLPP6Q8IY26 295 aa18.24■□□□□ 0.51
MSH6-207ENST00000456246 SETD7Q8WTS6 366 aaKnown RBP18.24■□□□□ 0.51
MSH6-207ENST00000456246 ISG20Q96AZ6 181 aaKnown RBP18.24■□□□□ 0.51
MSH6-207ENST00000456246 SERAC1Q96JX3 654 aa18.24■□□□□ 0.51
MSH6-207ENST00000456246 EPAS1Q99814 870 aa18.24■□□□□ 0.51
MSH6-207ENST00000456246 RAB6CQ9H0N0 254 aa18.24■□□□□ 0.51
MSH6-207ENST00000456246 IL21RQ9HBE5 538 aa18.24■□□□□ 0.51
MSH6-207ENST00000456246 PCOLCE2Q9UKZ9 415 aa18.24■□□□□ 0.51
MSH6-207ENST00000456246 WASF3Q9UPY6 502 aa18.24■□□□□ 0.51
MSH6-207ENST00000456246 NEU3Q9UQ49 428 aa18.24■□□□□ 0.51
MSH6-207ENST00000456246 MAP1BP46821 2468 aaKnown RBP18.24■□□□□ 0.51
MSH6-207ENST00000456246 EIF3CLB5ME19 914 aaKnown RBP18.23■□□□□ 0.51
MSH6-207ENST00000456246 FAM72CH0Y354 149 aa18.23■□□□□ 0.51
MSH6-207ENST00000456246 RNGTTO60942 597 aaKnown RBP18.23■□□□□ 0.51
MSH6-207ENST00000456246 CBFA2T3O75081 653 aa18.23■□□□□ 0.51
MSH6-207ENST00000456246 CTSLP07711 333 aa18.23■□□□□ 0.51
MSH6-207ENST00000456246 GZMAP12544 262 aa18.23■□□□□ 0.51
MSH6-207ENST00000456246 GLDCP23378 1020 aa18.23■□□□□ 0.51
MSH6-207ENST00000456246 METAP1P53582 386 aa18.23■□□□□ 0.51
MSH6-207ENST00000456246 RPL7AP62424 266 aaKnown RBP18.23■□□□□ 0.51
MSH6-207ENST00000456246 PPP2CBP62714 309 aa18.23■□□□□ 0.51
MSH6-207ENST00000456246 PPP2CAP67775 309 aa18.23■□□□□ 0.51
MSH6-207ENST00000456246 ARF5P84085 180 aa18.23■□□□□ 0.51
MSH6-207ENST00000456246 SETMARQ53H47 684 aaPredicted RBP18.23■□□□□ 0.51
MSH6-207ENST00000456246 FAM72AQ5TYM5 149 aa18.23■□□□□ 0.51
MSH6-207ENST00000456246 FAM72DQ6L9T8 149 aa18.23■□□□□ 0.51
MSH6-207ENST00000456246 SCYL2Q6P3W7 929 aa18.23■□□□□ 0.51
MSH6-207ENST00000456246 FAM72BQ86X60 149 aa18.23■□□□□ 0.51
MSH6-207ENST00000456246 OXR1Q8N573 874 aa18.23■□□□□ 0.51
MSH6-207ENST00000456246 RTL3Q8N8U3 475 aaKnown RBP18.23■□□□□ 0.51
MSH6-207ENST00000456246 ARHGEF2Q92974 986 aaKnown RBP18.23■□□□□ 0.51
MSH6-207ENST00000456246 IQCDQ96DY2 449 aa18.23■□□□□ 0.51
MSH6-207ENST00000456246 TRIM11Q96F44 468 aa18.23■□□□□ 0.51
MSH6-207ENST00000456246 CAMK1GQ96NX5 476 aa18.23■□□□□ 0.51
MSH6-207ENST00000456246 EIF3CQ99613 913 aaKnown RBP18.23■□□□□ 0.51
MSH6-207ENST00000456246 HDAC8Q9BY41 377 aa18.23■□□□□ 0.51
MSH6-207ENST00000456246 TTYH3Q9C0H2 523 aa18.23■□□□□ 0.51
MSH6-207ENST00000456246 CATSPERBQ9H7T0 1116 aa18.23■□□□□ 0.51
MSH6-207ENST00000456246 EBF2Q9HAK2 575 aa18.23■□□□□ 0.51
MSH6-207ENST00000456246 APOBEC2Q9Y235 224 aaKnown RBP18.23■□□□□ 0.51
MSH6-207ENST00000456246 A0A1W2PR77 199 aa18.22■□□□□ 0.51
MSH6-207ENST00000456246 SYCE3A1L190 88 aa18.22■□□□□ 0.51
MSH6-207ENST00000456246 FGF10O15520 208 aaPredicted RBP18.22■□□□□ 0.51
MSH6-207ENST00000456246 EPHB2P29323 1055 aa18.22■□□□□ 0.51
MSH6-207ENST00000456246 GRK6P43250 576 aa18.22■□□□□ 0.51
MSH6-207ENST00000456246 YBEYP58557 167 aaPredicted RBP18.22■□□□□ 0.51
MSH6-207ENST00000456246 KLHL30Q0D2K2 578 aa18.22■□□□□ 0.51
MSH6-207ENST00000456246 NR1I3Q14994 352 aa18.22■□□□□ 0.51
MSH6-207ENST00000456246 POLD3Q15054 466 aaPredicted RBP18.22■□□□□ 0.51
MSH6-207ENST00000456246 CARD16Q5EG05 197 aa18.22■□□□□ 0.51
MSH6-207ENST00000456246 PIP5KL1Q5T9C9 394 aa18.22■□□□□ 0.51
MSH6-207ENST00000456246 PLEKHA7Q6IQ23 1121 aa18.22■□□□□ 0.51
MSH6-207ENST00000456246 LAYNQ6UX15 382 aa18.22■□□□□ 0.51
MSH6-207ENST00000456246 DPY19L3Q6ZPD9 716 aa18.22■□□□□ 0.51
MSH6-207ENST00000456246 ERN2Q76MJ5 926 aaKnown RBP18.22■□□□□ 0.51
MSH6-207ENST00000456246 TMC6Q7Z403 805 aa18.22■□□□□ 0.51
MSH6-207ENST00000456246 ZSCAN30Q86W11 494 aa18.22■□□□□ 0.51
MSH6-207ENST00000456246 MFSD2AQ8NA29 543 aa18.22■□□□□ 0.51
MSH6-207ENST00000456246 CASKIN2Q8WXE0 1202 aa18.22■□□□□ 0.51
MSH6-207ENST00000456246 LRIG1Q96JA1 1093 aa18.22■□□□□ 0.51
MSH6-207ENST00000456246 NAP1L5Q96NT1 182 aaPredicted RBP18.22■□□□□ 0.51
MSH6-207ENST00000456246 ELF4Q99607 663 aaPredicted RBP18.22■□□□□ 0.51
MSH6-207ENST00000456246 HEPHQ9BQS7 1158 aa18.22■□□□□ 0.51
MSH6-207ENST00000456246 TNKS2Q9H2K2 1166 aa18.22■□□□□ 0.51
MSH6-207ENST00000456246 HAUS4Q9H6D7 363 aa18.22■□□□□ 0.51
MSH6-207ENST00000456246 GDF3Q9NR23 364 aa18.22■□□□□ 0.51
MSH6-207ENST00000456246 DNAI1Q9UI46 699 aa18.22■□□□□ 0.51
MSH6-207ENST00000456246 FZD10Q9ULW2 581 aa18.22■□□□□ 0.51
MSH6-207ENST00000456246 NEUROG3Q9Y4Z2 214 aa18.22■□□□□ 0.51
MSH6-207ENST00000456246 CACNA1BQ00975 2339 aa18.22■□□□□ 0.51
MSH6-207ENST00000456246 A0A1B0GTQ1 180 aa18.21■□□□□ 0.51
MSH6-207ENST00000456246 PRAMEF26H0Y7S4 382 aa18.21■□□□□ 0.51
MSH6-207ENST00000456246 H0Y8X5 98 aa18.21■□□□□ 0.51
MSH6-207ENST00000456246 GOLGA6L19H0YKK7 550 aa18.21■□□□□ 0.51
MSH6-207ENST00000456246 PLK4O00444 970 aa18.21■□□□□ 0.51
MSH6-207ENST00000456246 ITGB7P26010 798 aa18.21■□□□□ 0.51
MSH6-207ENST00000456246 ACVRL1P37023 503 aa18.21■□□□□ 0.51
MSH6-207ENST00000456246 ARRB1P49407 418 aaPredicted RBP18.21■□□□□ 0.51
MSH6-207ENST00000456246 CCNHP51946 323 aaPredicted RBP18.21■□□□□ 0.51
MSH6-207ENST00000456246 FAM193AP78312 1265 aa18.21■□□□□ 0.51
MSH6-207ENST00000456246 MAMLD1Q13495 774 aa18.21■□□□□ 0.51
MSH6-207ENST00000456246 POM121L1PQ3SYA9 428 aa18.21■□□□□ 0.51
MSH6-207ENST00000456246 ARSIQ5FYB1 569 aa18.21■□□□□ 0.51
MSH6-207ENST00000456246 CHST14Q8NCH0 376 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms