RNA–Protein interactions for RNA: ENST00000455656.1

TMEM56-202, Transcript of transmembrane protein 56, humanhuman

TSL 5

Gene TMEM56, Length 609 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM56-202ENST00000455656 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12.09□□□□□ -0.47
TMEM56-202ENST00000455656 DPY19L3Q6ZPD9 716 aa12.09□□□□□ -0.47
TMEM56-202ENST00000455656 PCDH20Q8N6Y1 951 aaKnown RBP12.09□□□□□ -0.47
TMEM56-202ENST00000455656 RNF214Q8ND24 703 aa12.09□□□□□ -0.47
TMEM56-202ENST00000455656 TMIEQ8NEW7 156 aa12.09□□□□□ -0.47
TMEM56-202ENST00000455656 KCTD15Q96SI1 283 aaPredicted RBP12.09□□□□□ -0.47
TMEM56-202ENST00000455656 GTPBP2Q9BX10 602 aaKnown RBP12.09□□□□□ -0.47
TMEM56-202ENST00000455656 CEP44Q9C0F1 390 aa12.09□□□□□ -0.47
TMEM56-202ENST00000455656 MIR1-1HGQ9H1L0 117 aa12.09□□□□□ -0.47
TMEM56-202ENST00000455656 LRRC19Q9H756 370 aa12.09□□□□□ -0.47
TMEM56-202ENST00000455656 IL21RQ9HBE5 538 aa12.09□□□□□ -0.47
TMEM56-202ENST00000455656 MYO1AQ9UBC5 1043 aa12.09□□□□□ -0.47
TMEM56-202ENST00000455656 PCSK1NQ9UHG2 260 aa12.09□□□□□ -0.47
TMEM56-202ENST00000455656 AP4E1Q9UPM8 1137 aa12.09□□□□□ -0.47
TMEM56-202ENST00000455656 FCF1Q9Y324 198 aaKnown RBP12.09□□□□□ -0.47
TMEM56-202ENST00000455656 SCINQ9Y6U3 715 aa12.09□□□□□ -0.47
TMEM56-202ENST00000455656 LRRK1Q38SD2 2015 aa12.08□□□□□ -0.48
TMEM56-202ENST00000455656 A0A1B0GVT2 93 aa12.08□□□□□ -0.48
TMEM56-202ENST00000455656 A0A1W2PR77 199 aa12.08□□□□□ -0.48
TMEM56-202ENST00000455656 FAM47DPA6NHR8 397 aa12.08□□□□□ -0.48
TMEM56-202ENST00000455656 C1QTNF3-AMACRE9PGA6 284 aa12.08□□□□□ -0.48
TMEM56-202ENST00000455656 SLC7A4O43246 635 aa12.08□□□□□ -0.48
TMEM56-202ENST00000455656 KDELR3O43731 214 aa12.08□□□□□ -0.48
TMEM56-202ENST00000455656 BNIP3LO60238 219 aa12.08□□□□□ -0.48
TMEM56-202ENST00000455656 RAMP2O60895 175 aa12.08□□□□□ -0.48
TMEM56-202ENST00000455656 WNT1P04628 370 aa12.08□□□□□ -0.48
TMEM56-202ENST00000455656 CYP1A2P05177 515 aa12.08□□□□□ -0.48
TMEM56-202ENST00000455656 MYBL1P10243 752 aa12.08□□□□□ -0.48
TMEM56-202ENST00000455656 CSRP1P21291 193 aaKnown RBP12.08□□□□□ -0.48
TMEM56-202ENST00000455656 GRIA4P48058 902 aa12.08□□□□□ -0.48
TMEM56-202ENST00000455656 CSNK1EP49674 416 aaKnown RBP12.08□□□□□ -0.48
TMEM56-202ENST00000455656 CCR5P51681 352 aa12.08□□□□□ -0.48
TMEM56-202ENST00000455656 POLD3Q15054 466 aaPredicted RBP12.08□□□□□ -0.48
TMEM56-202ENST00000455656 UAP1L1Q3KQV9 507 aa12.08□□□□□ -0.48
TMEM56-202ENST00000455656 ERMARDQ5T6L9 678 aa12.08□□□□□ -0.48
TMEM56-202ENST00000455656 N4BP2L1Q5TBK1 243 aaPredicted RBP12.08□□□□□ -0.48
TMEM56-202ENST00000455656 RETSATQ6NUM9 610 aa12.08□□□□□ -0.48
TMEM56-202ENST00000455656 LAYNQ6UX15 382 aa12.08□□□□□ -0.48
TMEM56-202ENST00000455656 LEKR1Q6ZMV7 388 aa12.08□□□□□ -0.48
TMEM56-202ENST00000455656 DSG4Q86SJ6 1040 aa12.08□□□□□ -0.48
TMEM56-202ENST00000455656 VSTM4Q8IW00 320 aa12.08□□□□□ -0.48
TMEM56-202ENST00000455656 PLPP6Q8IY26 295 aa12.08□□□□□ -0.48
TMEM56-202ENST00000455656 UMODL1-AS1Q8N2C9 162 aa12.08□□□□□ -0.48
TMEM56-202ENST00000455656 GANCQ8TET4 914 aa12.08□□□□□ -0.48
TMEM56-202ENST00000455656 SNX19Q92543 992 aa12.08□□□□□ -0.48
TMEM56-202ENST00000455656 ISG20Q96AZ6 181 aaKnown RBP12.08□□□□□ -0.48
TMEM56-202ENST00000455656 TRIM11Q96F44 468 aa12.08□□□□□ -0.48
TMEM56-202ENST00000455656 BTBD6Q96KE9 485 aa12.08□□□□□ -0.48
TMEM56-202ENST00000455656 SLC6A18Q96N87 628 aa12.08□□□□□ -0.48
TMEM56-202ENST00000455656 DNAJC7Q99615 494 aa12.08□□□□□ -0.48
TMEM56-202ENST00000455656 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.08□□□□□ -0.48
TMEM56-202ENST00000455656 KDM4CQ9H3R0 1056 aa12.08□□□□□ -0.48
TMEM56-202ENST00000455656 PDFQ9HBH1 243 aa12.08□□□□□ -0.48
TMEM56-202ENST00000455656 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.08□□□□□ -0.48
TMEM56-202ENST00000455656 CNOT1A5YKK6 2376 aaKnown RBP12.08□□□□□ -0.48
TMEM56-202ENST00000455656 SPTBN2O15020 2390 aa12.07□□□□□ -0.48
TMEM56-202ENST00000455656 LRRC72A6NJI9 287 aa12.07□□□□□ -0.48
TMEM56-202ENST00000455656 RASA4BC9J798 803 aa12.07□□□□□ -0.48
TMEM56-202ENST00000455656 FGF10O15520 208 aaPredicted RBP12.07□□□□□ -0.48
TMEM56-202ENST00000455656 RASA4O43374 803 aa12.07□□□□□ -0.48
TMEM56-202ENST00000455656 LEFTY1O75610 366 aa12.07□□□□□ -0.48
TMEM56-202ENST00000455656 SYPP08247 313 aa12.07□□□□□ -0.48
TMEM56-202ENST00000455656 HTR7P34969 479 aa12.07□□□□□ -0.48
TMEM56-202ENST00000455656 PCK1P35558 622 aa12.07□□□□□ -0.48
TMEM56-202ENST00000455656 ETFBP38117 255 aa12.07□□□□□ -0.48
TMEM56-202ENST00000455656 EIF4A3P38919 411 aaKnown RBP12.07□□□□□ -0.48
TMEM56-202ENST00000455656 AFF3P51826 1226 aaKnown RBP12.07□□□□□ -0.48
TMEM56-202ENST00000455656 CCNHP51946 323 aaPredicted RBP12.07□□□□□ -0.48
TMEM56-202ENST00000455656 YBEYP58557 167 aaPredicted RBP12.07□□□□□ -0.48
TMEM56-202ENST00000455656 SFSWAPQ12872 951 aaKnown RBP12.07□□□□□ -0.48
TMEM56-202ENST00000455656 MAPK8IP2Q13387 824 aaPredicted RBP12.07□□□□□ -0.48
TMEM56-202ENST00000455656 SERINC3Q13530 473 aa12.07□□□□□ -0.48
TMEM56-202ENST00000455656 KIF19Q2TAC6 998 aa12.07□□□□□ -0.48
TMEM56-202ENST00000455656 CARD16Q5EG05 197 aa12.07□□□□□ -0.48
TMEM56-202ENST00000455656 ARSIQ5FYB1 569 aa12.07□□□□□ -0.48
TMEM56-202ENST00000455656 FAM46CQ5VWP2 391 aa12.07□□□□□ -0.48
TMEM56-202ENST00000455656 AFMIDQ63HM1 303 aa12.07□□□□□ -0.48
TMEM56-202ENST00000455656 SPECC1LQ69YQ0 1117 aa12.07□□□□□ -0.48
TMEM56-202ENST00000455656 TXNRD3NBQ6F5E7 133 aa12.07□□□□□ -0.48
TMEM56-202ENST00000455656 PSAPL1Q6NUJ1 521 aa12.07□□□□□ -0.48
TMEM56-202ENST00000455656 ALKBH5Q6P6C2 394 aaKnown RBP12.07□□□□□ -0.48
TMEM56-202ENST00000455656 CPNE8Q86YQ8 564 aa12.07□□□□□ -0.48
TMEM56-202ENST00000455656 PSTKQ8IV42 348 aaKnown RBP12.07□□□□□ -0.48
TMEM56-202ENST00000455656 ARHGAP12Q8IWW6 846 aa12.07□□□□□ -0.48
TMEM56-202ENST00000455656 NIPA2Q8N8Q9 360 aa12.07□□□□□ -0.48
TMEM56-202ENST00000455656 OR14C36Q8NHC7 312 aa12.07□□□□□ -0.48
TMEM56-202ENST00000455656 GRIN3AQ8TCU5 1115 aa12.07□□□□□ -0.48
TMEM56-202ENST00000455656 HMCESQ96FZ2 354 aa12.07□□□□□ -0.48
TMEM56-202ENST00000455656 EPAS1Q99814 870 aa12.07□□□□□ -0.48
TMEM56-202ENST00000455656 ZDHHC5Q9C0B5 715 aa12.07□□□□□ -0.48
TMEM56-202ENST00000455656 DHX35Q9H5Z1 703 aaKnown RBP12.07□□□□□ -0.48
TMEM56-202ENST00000455656 MRPL47Q9HD33 250 aaKnown RBP12.07□□□□□ -0.48
TMEM56-202ENST00000455656 IL36AQ9UHA7 158 aa12.07□□□□□ -0.48
TMEM56-202ENST00000455656 FNDC3AQ9Y2H6 1198 aaKnown RBP12.07□□□□□ -0.48
TMEM56-202ENST00000455656 TRPM6Q9BX84 2022 aa12.06□□□□□ -0.48
TMEM56-202ENST00000455656 NCOR2Q9Y618 2525 aa12.06□□□□□ -0.48
TMEM56-202ENST00000455656 EIF3CLB5ME19 914 aaKnown RBP12.06□□□□□ -0.48
TMEM56-202ENST00000455656 KPNA3O00505 521 aaPredicted RBP12.06□□□□□ -0.48
TMEM56-202ENST00000455656 CBFA2T2O43439 604 aa12.06□□□□□ -0.48
TMEM56-202ENST00000455656 OPHN1O60890 802 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms