RNA–Protein interactions for RNA: ENST00000455596.5

HMGB3-205, Transcript of high mobility group box 3, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene HMGB3, Length 793 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3-205ENST00000455596 VILLO15195 856 aa21.67■■□□□ 1.06
HMGB3-205ENST00000455596 GZMAP12544 262 aa21.67■■□□□ 1.06
HMGB3-205ENST00000455596 ACVRL1P37023 503 aa21.67■■□□□ 1.06
HMGB3-205ENST00000455596 C21orf59P57076 290 aa21.67■■□□□ 1.06
HMGB3-205ENST00000455596 PPP2CBP62714 309 aa21.67■■□□□ 1.06
HMGB3-205ENST00000455596 PPP2CAP67775 309 aa21.67■■□□□ 1.06
HMGB3-205ENST00000455596 CCDC15Q0P6D6 951 aa21.67■■□□□ 1.06
HMGB3-205ENST00000455596 FOXC1Q12948 553 aa21.67■■□□□ 1.06
HMGB3-205ENST00000455596 MAMLD1Q13495 774 aa21.67■■□□□ 1.06
HMGB3-205ENST00000455596 AGBL4Q5VU57 503 aa21.67■■□□□ 1.06
HMGB3-205ENST00000455596 PLEKHA7Q6IQ23 1121 aa21.67■■□□□ 1.06
HMGB3-205ENST00000455596 PRPF39Q86UA1 669 aaKnown RBP21.67■■□□□ 1.06
HMGB3-205ENST00000455596 PYROXD2Q8N2H3 581 aa21.67■■□□□ 1.06
HMGB3-205ENST00000455596 PCDH20Q8N6Y1 951 aaKnown RBP21.67■■□□□ 1.06
HMGB3-205ENST00000455596 ARHGEF2Q92974 986 aaKnown RBP21.67■■□□□ 1.06
HMGB3-205ENST00000455596 SKA1Q96BD8 255 aa21.67■■□□□ 1.06
HMGB3-205ENST00000455596 DYRK4Q9NR20 520 aa21.67■■□□□ 1.06
HMGB3-205ENST00000455596 AASDHPPTQ9NRN7 309 aa21.67■■□□□ 1.06
HMGB3-205ENST00000455596 IL36AQ9UHA7 158 aa21.67■■□□□ 1.06
HMGB3-205ENST00000455596 FZD10Q9ULW2 581 aa21.67■■□□□ 1.06
HMGB3-205ENST00000455596 HPCAL4Q9UM19 191 aa21.67■■□□□ 1.06
HMGB3-205ENST00000455596 PCDHB9Q9Y5E1 797 aa21.67■■□□□ 1.06
HMGB3-205ENST00000455596 ATMINO43313 823 aaPredicted RBP21.66■■□□□ 1.06
HMGB3-205ENST00000455596 RAMP2O60895 175 aa21.66■■□□□ 1.06
HMGB3-205ENST00000455596 CD38P28907 300 aa21.66■■□□□ 1.06
HMGB3-205ENST00000455596 UBASH3AP57075 661 aa21.66■■□□□ 1.06
HMGB3-205ENST00000455596 GEMIN4P57678 1058 aaKnown RBP21.66■■□□□ 1.06
HMGB3-205ENST00000455596 SIM1P81133 766 aaPredicted RBP21.66■■□□□ 1.06
HMGB3-205ENST00000455596 OGDHQ02218 1023 aa21.66■■□□□ 1.06
HMGB3-205ENST00000455596 DPY19L3Q6ZPD9 716 aa21.66■■□□□ 1.06
HMGB3-205ENST00000455596 TMC6Q7Z403 805 aa21.66■■□□□ 1.06
HMGB3-205ENST00000455596 CHST14Q8NCH0 376 aa21.66■■□□□ 1.06
HMGB3-205ENST00000455596 CAMK1GQ96NX5 476 aa21.66■■□□□ 1.06
HMGB3-205ENST00000455596 PCDHGB2Q9Y5G2 931 aa21.66■■□□□ 1.06
HMGB3-205ENST00000455596 DDX3XO00571 662 aaKnown RBP eCLIP21.65■■□□□ 1.06
HMGB3-205ENST00000455596 LATO43561 262 aa21.65■■□□□ 1.06
HMGB3-205ENST00000455596 ZNF821O75541 412 aaPredicted RBP21.65■■□□□ 1.06
HMGB3-205ENST00000455596 FTLP02792 175 aaPredicted RBP21.65■■□□□ 1.06
HMGB3-205ENST00000455596 SKILP12757 684 aa21.65■■□□□ 1.06
HMGB3-205ENST00000455596 PSMA2P25787 234 aa21.65■■□□□ 1.06
HMGB3-205ENST00000455596 EPHB2P29323 1055 aa21.65■■□□□ 1.06
HMGB3-205ENST00000455596 CTSKP43235 329 aa21.65■■□□□ 1.06
HMGB3-205ENST00000455596 POLD3Q15054 466 aaPredicted RBP21.65■■□□□ 1.06
HMGB3-205ENST00000455596 SLC45A4Q5BKX6 768 aa21.65■■□□□ 1.06
HMGB3-205ENST00000455596 CARD16Q5EG05 197 aa21.65■■□□□ 1.06
HMGB3-205ENST00000455596 TRIM69Q86WT6 500 aa21.65■■□□□ 1.06
HMGB3-205ENST00000455596 RTL3Q8N8U3 475 aaKnown RBP21.65■■□□□ 1.06
HMGB3-205ENST00000455596 GRIN3AQ8TCU5 1115 aa21.65■■□□□ 1.06
HMGB3-205ENST00000455596 SETD7Q8WTS6 366 aaKnown RBP21.65■■□□□ 1.06
HMGB3-205ENST00000455596 ARRDC3Q96B67 414 aa21.65■■□□□ 1.06
HMGB3-205ENST00000455596 PPP1R16AQ96I34 528 aa21.65■■□□□ 1.06
HMGB3-205ENST00000455596 SERAC1Q96JX3 654 aa21.65■■□□□ 1.06
HMGB3-205ENST00000455596 EPAS1Q99814 870 aa21.65■■□□□ 1.06
HMGB3-205ENST00000455596 CATSPERBQ9H7T0 1116 aa21.65■■□□□ 1.06
HMGB3-205ENST00000455596 PREBQ9HCU5 417 aa21.65■■□□□ 1.06
HMGB3-205ENST00000455596 FCF1Q9Y324 198 aaKnown RBP21.65■■□□□ 1.06
HMGB3-205ENST00000455596 A0A1W2PQJ5 194 aa21.64■■□□□ 1.05
HMGB3-205ENST00000455596 FLRT2O43155 660 aa21.64■■□□□ 1.05
HMGB3-205ENST00000455596 CREB3O43889 395 aa21.64■■□□□ 1.05
HMGB3-205ENST00000455596 DFNA5O60443 496 aa21.64■■□□□ 1.05
HMGB3-205ENST00000455596 CD160O95971 181 aa21.64■■□□□ 1.05
HMGB3-205ENST00000455596 MAT2AP31153 395 aaKnown RBP21.64■■□□□ 1.05
HMGB3-205ENST00000455596 NUDT1P36639 197 aa21.64■■□□□ 1.05
HMGB3-205ENST00000455596 PBX1P40424 430 aa21.64■■□□□ 1.05
HMGB3-205ENST00000455596 DNA2P51530 1060 aa21.64■■□□□ 1.05
HMGB3-205ENST00000455596 FAM193AP78312 1265 aa21.64■■□□□ 1.05
HMGB3-205ENST00000455596 SUZ12Q15022 739 aaKnown RBP21.64■■□□□ 1.05
HMGB3-205ENST00000455596 TRIP6Q15654 476 aaKnown RBP21.64■■□□□ 1.05
HMGB3-205ENST00000455596 ZNF423Q2M1K9 1284 aa21.64■■□□□ 1.05
HMGB3-205ENST00000455596 ZSCAN23Q3MJ62 389 aa21.64■■□□□ 1.05
HMGB3-205ENST00000455596 ARSIQ5FYB1 569 aa21.64■■□□□ 1.05
HMGB3-205ENST00000455596 KCNT1Q5JUK3 1230 aa21.64■■□□□ 1.05
HMGB3-205ENST00000455596 PIP5KL1Q5T9C9 394 aa21.64■■□□□ 1.05
HMGB3-205ENST00000455596 DNAAF5Q86Y56 855 aa21.64■■□□□ 1.05
HMGB3-205ENST00000455596 ISG20Q96AZ6 181 aaKnown RBP21.64■■□□□ 1.05
HMGB3-205ENST00000455596 HEPHQ9BQS7 1158 aa21.64■■□□□ 1.05
HMGB3-205ENST00000455596 ARHGAP20Q9P2F6 1191 aa21.64■■□□□ 1.05
HMGB3-205ENST00000455596 CNOT8Q9UFF9 292 aaKnown RBP21.64■■□□□ 1.05
HMGB3-205ENST00000455596 ACTL7AQ9Y615 435 aa21.64■■□□□ 1.05
HMGB3-205ENST00000455596 KCNK3O14649 394 aa21.63■■□□□ 1.05
HMGB3-205ENST00000455596 LEFTY1O75610 366 aa21.63■■□□□ 1.05
HMGB3-205ENST00000455596 WNT1P04628 370 aa21.63■■□□□ 1.05
HMGB3-205ENST00000455596 CCT8P50990 548 aa21.63■■□□□ 1.05
HMGB3-205ENST00000455596 TAS2R38P59533 333 aa21.63■■□□□ 1.05
HMGB3-205ENST00000455596 SKOR2Q2VWA4 1001 aaPredicted RBP21.63■■□□□ 1.05
HMGB3-205ENST00000455596 TDRD12Q587J7 1177 aaKnown RBP21.63■■□□□ 1.05
HMGB3-205ENST00000455596 NAPEPLDQ6IQ20 393 aa21.63■■□□□ 1.05
HMGB3-205ENST00000455596 DBX2Q6ZNG2 339 aa21.63■■□□□ 1.05
HMGB3-205ENST00000455596 ZNF354CQ86Y25 554 aa21.63■■□□□ 1.05
HMGB3-205ENST00000455596 ZNF653Q96CK0 615 aa21.63■■□□□ 1.05
HMGB3-205ENST00000455596 IQCDQ96DY2 449 aa21.63■■□□□ 1.05
HMGB3-205ENST00000455596 TRIM11Q96F44 468 aa21.63■■□□□ 1.05
HMGB3-205ENST00000455596 PCOLCE2Q9UKZ9 415 aa21.63■■□□□ 1.05
HMGB3-205ENST00000455596 DMTF1Q9Y222 760 aa21.63■■□□□ 1.05
HMGB3-205ENST00000455596 SCINQ9Y6U3 715 aa21.63■■□□□ 1.05
HMGB3-205ENST00000455596 WASF2Q9Y6W5 498 aa21.63■■□□□ 1.05
HMGB3-205ENST00000455596 TRPM6Q9BX84 2022 aa21.63■■□□□ 1.05
HMGB3-205ENST00000455596 A0A1W2PR77 199 aa21.62■■□□□ 1.05
HMGB3-205ENST00000455596 TMEM191CA6NGB0 347 aa21.62■■□□□ 1.05
HMGB3-205ENST00000455596 ZSCAN5CA6NGD5 496 aaPredicted RBP21.62■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms