RNA–Protein interactions for RNA: ENST00000453441.1

COL28A1-205, Transcript of collagen type XXVIII alpha 1 chain, humanhuman

TSL 2

Gene COL28A1, Length 700 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL28A1-205ENST00000453441 TRIM24O15164 1050 aa8.9□□□□□ -0.98
COL28A1-205ENST00000453441 LAMTOR5O43504 91 aa8.9□□□□□ -0.98
COL28A1-205ENST00000453441 KDELR3O43731 214 aa8.9□□□□□ -0.98
COL28A1-205ENST00000453441 ALDH1A2O94788 518 aa8.9□□□□□ -0.98
COL28A1-205ENST00000453441 KLF8O95600 359 aaPredicted RBP8.9□□□□□ -0.98
COL28A1-205ENST00000453441 DCNP07585 359 aaKnown RBP8.9□□□□□ -0.98
COL28A1-205ENST00000453441 HOXB2P14652 356 aa8.9□□□□□ -0.98
COL28A1-205ENST00000453441 MX2P20592 715 aa8.9□□□□□ -0.98
COL28A1-205ENST00000453441 MZF1P28698 734 aaPredicted RBP8.9□□□□□ -0.98
COL28A1-205ENST00000453441 PTPN7P35236 360 aa8.9□□□□□ -0.98
COL28A1-205ENST00000453441 SCTRP47872 440 aa8.9□□□□□ -0.98
COL28A1-205ENST00000453441 RNF144AP50876 292 aaPredicted RBP8.9□□□□□ -0.98
COL28A1-205ENST00000453441 ZNF33AQ06730 810 aa8.9□□□□□ -0.98
COL28A1-205ENST00000453441 SFSWAPQ12872 951 aaKnown RBP8.9□□□□□ -0.98
COL28A1-205ENST00000453441 MTAPQ13126 283 aa8.9□□□□□ -0.98
COL28A1-205ENST00000453441 ZNF234Q14588 700 aa8.9□□□□□ -0.98
COL28A1-205ENST00000453441 PAFAH1B3Q15102 231 aaKnown RBP8.9□□□□□ -0.98
COL28A1-205ENST00000453441 TAZQ16635 292 aa8.9□□□□□ -0.98
COL28A1-205ENST00000453441 MAP7D1Q3KQU3 841 aa8.9□□□□□ -0.98
COL28A1-205ENST00000453441 ZNF528Q3MIS6 628 aa8.9□□□□□ -0.98
COL28A1-205ENST00000453441 FNDC3BQ53EP0 1204 aaKnown RBP8.9□□□□□ -0.98
COL28A1-205ENST00000453441 HS1BP3Q53T59 392 aa8.9□□□□□ -0.98
COL28A1-205ENST00000453441 INO80DQ53TQ3 878 aaPredicted RBP8.9□□□□□ -0.98
COL28A1-205ENST00000453441 C2orf27AQ580R0 203 aa8.9□□□□□ -0.98
COL28A1-205ENST00000453441 ANKRD20A8PQ5CZ79 823 aa8.9□□□□□ -0.98
COL28A1-205ENST00000453441 TFDP3Q5H9I0 405 aa8.9□□□□□ -0.98
COL28A1-205ENST00000453441 AFMIDQ63HM1 303 aa8.9□□□□□ -0.98
COL28A1-205ENST00000453441 EGFLAMQ63HQ2 1017 aa8.9□□□□□ -0.98
COL28A1-205ENST00000453441 TMEM215Q68D42 235 aa8.9□□□□□ -0.98
COL28A1-205ENST00000453441 NAIF1Q69YI7 327 aaPredicted RBP8.9□□□□□ -0.98
COL28A1-205ENST00000453441 IL31Q6EBC2 164 aa8.9□□□□□ -0.98
COL28A1-205ENST00000453441 SERPINA13PQ6UXR4 307 aa8.9□□□□□ -0.98
COL28A1-205ENST00000453441 IL17RCQ8NAC3 791 aa8.9□□□□□ -0.98
COL28A1-205ENST00000453441 FATE1Q969F0 183 aa8.9□□□□□ -0.98
COL28A1-205ENST00000453441 ISG20Q96AZ6 181 aaKnown RBP8.9□□□□□ -0.98
COL28A1-205ENST00000453441 CCDC114Q96M63 670 aa8.9□□□□□ -0.98
COL28A1-205ENST00000453441 ZNF830Q96NB3 372 aaPredicted RBP8.9□□□□□ -0.98
COL28A1-205ENST00000453441 RNF157Q96PX1 679 aa8.9□□□□□ -0.98
COL28A1-205ENST00000453441 LRFN3Q9BTN0 628 aa8.9□□□□□ -0.98
COL28A1-205ENST00000453441 CEP44Q9C0F1 390 aa8.9□□□□□ -0.98
COL28A1-205ENST00000453441 BRD8Q9H0E9 1235 aa8.9□□□□□ -0.98
COL28A1-205ENST00000453441 TMEM245Q9H330 911 aa8.9□□□□□ -0.98
COL28A1-205ENST00000453441 LRRC19Q9H756 370 aa8.9□□□□□ -0.98
COL28A1-205ENST00000453441 LZTFL1Q9NQ48 299 aa8.9□□□□□ -0.98
COL28A1-205ENST00000453441 PRMT8Q9NR22 394 aaPredicted RBP8.9□□□□□ -0.98
COL28A1-205ENST00000453441 KCND1Q9NSA2 647 aa8.9□□□□□ -0.98
COL28A1-205ENST00000453441 RBM12Q9NTZ6 932 aaKnown RBP8.9□□□□□ -0.98
COL28A1-205ENST00000453441 SPATA6Q9NWH7 488 aaPredicted RBP8.9□□□□□ -0.98
COL28A1-205ENST00000453441 DNAI1Q9UI46 699 aa8.9□□□□□ -0.98
COL28A1-205ENST00000453441 INTS6Q9UL03 887 aaKnown RBP8.9□□□□□ -0.98
COL28A1-205ENST00000453441 DOLKQ9UPQ8 538 aa8.9□□□□□ -0.98
COL28A1-205ENST00000453441 ERVW-1Q9UQF0 538 aa8.9□□□□□ -0.98
COL28A1-205ENST00000453441 CAPN6Q9Y6Q1 641 aa8.9□□□□□ -0.98
COL28A1-205ENST00000453441 STON1Q9Y6Q2 735 aa8.9□□□□□ -0.98
COL28A1-205ENST00000453441 CKAP5Q14008 2032 aa8.9□□□□□ -0.99
COL28A1-205ENST00000453441 MUC22E2RYF6 1773 aaPredicted RBP8.89□□□□□ -0.99
COL28A1-205ENST00000453441 NUP205Q92621 2012 aa8.89□□□□□ -0.99
COL28A1-205ENST00000453441 EDDM13A0A1B0GTR0 161 aa8.89□□□□□ -0.99
COL28A1-205ENST00000453441 RASA4BC9J798 803 aa8.89□□□□□ -0.99
COL28A1-205ENST00000453441 CBX4O00257 560 aa8.89□□□□□ -0.99
COL28A1-205ENST00000453441 APOL1O14791 398 aa8.89□□□□□ -0.99
COL28A1-205ENST00000453441 ALOX15BO15296 676 aa8.89□□□□□ -0.99
COL28A1-205ENST00000453441 RASA4O43374 803 aa8.89□□□□□ -0.99
COL28A1-205ENST00000453441 PI15O43692 258 aa8.89□□□□□ -0.99
COL28A1-205ENST00000453441 ATP9BO43861 1147 aa8.89□□□□□ -0.99
COL28A1-205ENST00000453441 KIF5CO60282 957 aa8.89□□□□□ -0.99
COL28A1-205ENST00000453441 SYNCRIPO60506 623 aaKnown RBP8.89□□□□□ -0.99
COL28A1-205ENST00000453441 APBB3O95704 486 aa8.89□□□□□ -0.99
COL28A1-205ENST00000453441 TGM2P21980 687 aa8.89□□□□□ -0.99
COL28A1-205ENST00000453441 IL4RP24394 825 aa8.89□□□□□ -0.99
COL28A1-205ENST00000453441 CDKN2BP42772 138 aa8.89□□□□□ -0.99
COL28A1-205ENST00000453441 NR2C2P49116 596 aa8.89□□□□□ -0.99
COL28A1-205ENST00000453441 NRLP54845 237 aa8.89□□□□□ -0.99
COL28A1-205ENST00000453441 SEC13P55735 322 aa8.89□□□□□ -0.99
COL28A1-205ENST00000453441 MESP2Q0VG99 397 aa8.89□□□□□ -0.99
COL28A1-205ENST00000453441 SERINC3Q13530 473 aa8.89□□□□□ -0.99
COL28A1-205ENST00000453441 RFTN1Q14699 578 aaPredicted RBP8.89□□□□□ -0.99
COL28A1-205ENST00000453441 CRY1Q16526 586 aa8.89□□□□□ -0.99
COL28A1-205ENST00000453441 HNRNPA1L2Q32P51 320 aaKnown RBP8.89□□□□□ -0.99
COL28A1-205ENST00000453441 SLC9A4Q6AI14 798 aa8.89□□□□□ -0.99
COL28A1-205ENST00000453441 TIGD7Q6NT04 549 aaPredicted RBP8.89□□□□□ -0.99
COL28A1-205ENST00000453441 SPOCD1Q6ZMY3 1216 aa8.89□□□□□ -0.99
COL28A1-205ENST00000453441 Q6ZS52 159 aa8.89□□□□□ -0.99
COL28A1-205ENST00000453441 DSG4Q86SJ6 1040 aa8.89□□□□□ -0.99
COL28A1-205ENST00000453441 C1orf210Q8IVY1 113 aa8.89□□□□□ -0.99
COL28A1-205ENST00000453441 APCDD1Q8J025 514 aa8.89□□□□□ -0.99
COL28A1-205ENST00000453441 BBS5Q8N3I7 341 aa8.89□□□□□ -0.99
COL28A1-205ENST00000453441 ALLCQ8N6M5 410 aa8.89□□□□□ -0.99
COL28A1-205ENST00000453441 PCDH20Q8N6Y1 951 aaKnown RBP8.89□□□□□ -0.99
COL28A1-205ENST00000453441 TXNDC5Q8NBS9 432 aaKnown RBP8.89□□□□□ -0.99
COL28A1-205ENST00000453441 PCDH19Q8TAB3 1148 aa8.89□□□□□ -0.99
COL28A1-205ENST00000453441 RNF217Q8TC41 542 aa8.89□□□□□ -0.99
COL28A1-205ENST00000453441 NSMCE1Q8WV22 266 aa8.89□□□□□ -0.99
COL28A1-205ENST00000453441 RAPGEF5Q92565 580 aa8.89□□□□□ -0.99
COL28A1-205ENST00000453441 HES6Q96HZ4 224 aa8.89□□□□□ -0.99
COL28A1-205ENST00000453441 MRGPRX3Q96LB0 322 aa8.89□□□□□ -0.99
COL28A1-205ENST00000453441 ZNF599Q96NL3 588 aa8.89□□□□□ -0.99
COL28A1-205ENST00000453441 PSMB7Q99436 277 aa8.89□□□□□ -0.99
COL28A1-205ENST00000453441 SPON2Q9BUD6 331 aa8.89□□□□□ -0.99
COL28A1-205ENST00000453441 MAGEB5Q9BZ81 275 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms